EWM25342.1, cds5331 (CDS) Nannochloropsis gaditana

Overview
NameEWM25342.1
Unique Namecds5331
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:762042..762587 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25342.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100005g144.6636.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:762042..762587 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25342.1 vs. NCBI_GenBank
Match: gi|585107103|gb|EWM25342.1| (hypothetical protein Naga_100005g144 [Nannochloropsis gaditana])

HSP 1 Score: 370.163 bits (949), Expect = 1.133e-129
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 
Query:    1 MCLPIVQIPCAIFVCSRGLQVATGCPPIGALASYLDESCPCGIRPAAFLTHYCKPSGDLSRHIFPSTVSSKQRALLFFSWGLEQHYNERVSCPLPELASLSGRKCQAPAGRTNKSPIPVTRGRIIQIVQGSRRTRKTFIRLKMIGDGGELAQSGGACWGPLGPWRRIQRHRWHVKAHKTRT 181
            MCLPIVQIPCAIFVCSRGLQVATGCPPIGALASYLDESCPCGIRPAAFLTHYCKPSGDLSRHIFPSTVSSKQRALLFFSWGLEQHYNERVSCPLPELASLSGRKCQAPAGRTNKSPIPVTRGRIIQIVQGSRRTRKTFIRLKMIGDGGELAQSGGACWGPLGPWRRIQRHRWHVKAHKTRT
Sbjct:    1 MCLPIVQIPCAIFVCSRGLQVATGCPPIGALASYLDESCPCGIRPAAFLTHYCKPSGDLSRHIFPSTVSSKQRALLFFSWGLEQHYNERVSCPLPELASLSGRKCQAPAGRTNKSPIPVTRGRIIQIVQGSRRTRKTFIRLKMIGDGGELAQSGGACWGPLGPWRRIQRHRWHVKAHKTRT 181
The following BLAST results are available for this feature:
BLAST of EWM25342.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585107103|gb|EWM25342.1|1.133e-129100.00hypothetical protein Naga_100005g144 [Nannochlorop... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5344rna5344Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications