EWM25345.1, cds5300 (CDS) Nannochloropsis gaditana

Overview
NameEWM25345.1
Unique Namecds5300
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:685085..685825 +

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Properties
Property NameValue
Protein idEWM25345.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100005g107.6639.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:685085..685825 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM25345.1 vs. NCBI_GenBank
Match: gi|585107106|gb|EWM25345.1| (hypothetical protein Naga_100005g107 [Nannochloropsis gaditana])

HSP 1 Score: 500.36 bits (1287), Expect = 4.418e-179
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 
Query:    1 MKLRALTSLVSCSLVQAFLVPVAPGMGRPREPLRPSSAVLASASEPVVEALAGRKPEYILMEDGHGRSINTTMIAYLRQDGKRYCLGTPVDSPMVLMDSGGRPIDPSSALAEGMFYQLDDYFTNKGYEILHTAGFLTIAGEPDWFDDEELEEGEEEEDSDDEYDSEEEDDEREEAATAQMARQEAARKDDSVRVDPICDVEYDGSMYRIVQLLDRVPLSAEEDAEGKWVLVNDADTHLGLEKRAKK 246
            MKLRALTSLVSCSLVQAFLVPVAPGMGRPREPLRPSSAVLASASEPVVEALAGRKPEYILMEDGHGRSINTTMIAYLRQDGKRYCLGTPVDSPMVLMDSGGRPIDPSSALAEGMFYQLDDYFTNKGYEILHTAGFLTIAGEPDWFDDEELEEGEEEEDSDDEYDSEEEDDEREEAATAQMARQEAARKDDSVRVDPICDVEYDGSMYRIVQLLDRVPLSAEEDAEGKWVLVNDADTHLGLEKRAKK
Sbjct:    1 MKLRALTSLVSCSLVQAFLVPVAPGMGRPREPLRPSSAVLASASEPVVEALAGRKPEYILMEDGHGRSINTTMIAYLRQDGKRYCLGTPVDSPMVLMDSGGRPIDPSSALAEGMFYQLDDYFTNKGYEILHTAGFLTIAGEPDWFDDEELEEGEEEEDSDDEYDSEEEDDEREEAATAQMARQEAARKDDSVRVDPICDVEYDGSMYRIVQLLDRVPLSAEEDAEGKWVLVNDADTHLGLEKRAKK 246
[Close]
BLAST of EWM25345.1 vs. NCBI_GenBank
Match: gi|553178629|ref|XP_005852583.1| (hypothetical protein NGA_0098202 [Nannochloropsis gaditana CCMP526] >gi|422295947|gb|EKU23246.1| hypothetical protein NGA_0098202 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 498.049 bits (1281), Expect = 4.009e-178
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 0 
Query:    1 MKLRALTSLVSCSLVQAFLVPVAPGMGRPREPLRPSSAVLASASEPVVEALAGRKPEYILMEDGHGRSINTTMIAYLRQDGKRYCLGTPVDSPMVLMDSGGRPIDPSSALAEGMFYQLDDYFTNKGYEILHTAGFLTIAGEPDWFDDEELEEGEEEEDSDDEYDSEEEDDEREEAATAQMARQEAARKDDSVRVDPICDVEYDGSMYRIVQLLDRVPLSAEEDAEGKWVLVNDADTHLGLEKRAKK 246
            MKLRALTSLVSCSLVQAFLVPVAPGMGRPREPLRPSSAVLASASEPVVEALAGRKPEYILMEDGHGRSINTTMIAYLRQDGKRYCLGTPVD PMVLMDSGGRPIDPSSALAEGMFYQLDDYFTNKGYEILHTAGFLTIAGEPDWFDDEELEEGEEEEDSDDEYDSEEEDDEREEAATAQMARQEAARKDDSVRVDPICDVEYDGSMYRIVQLLDRVPLSAEEDAEGKWVLVNDADTHLGLEKRAKK
Sbjct:    1 MKLRALTSLVSCSLVQAFLVPVAPGMGRPREPLRPSSAVLASASEPVVEALAGRKPEYILMEDGHGRSINTTMIAYLRQDGKRYCLGTPVDCPMVLMDSGGRPIDPSSALAEGMFYQLDDYFTNKGYEILHTAGFLTIAGEPDWFDDEELEEGEEEEDSDDEYDSEEEDDEREEAATAQMARQEAARKDDSVRVDPICDVEYDGSMYRIVQLLDRVPLSAEEDAEGKWVLVNDADTHLGLEKRAKK 246
The following BLAST results are available for this feature:
BLAST of EWM25345.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585107106|gb|EWM25345.1|4.418e-179100.00hypothetical protein Naga_100005g107 [Nannochlorop... [more]
gi|553178629|ref|XP_005852583.1|4.009e-17899.59hypothetical protein NGA_0098202 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5313rna5313Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications