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Properties
| Property Name | Value |
|---|
| Product | wd-40 repeat protein |
| Orig transcript id | gnl|cribi|Naga_100005g98.6748.mrna |
| Orig protein id | gnl|cribi|Naga_100005g98.6748 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:667735..669800 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5304 ID=rna5304|Name=rna5304|organism=Nannochloropsis gaditana|type=mRNA|length=1842bp
ATGTCTTTTCGCCTTCTCCTCAAGCGCAGACTCGTCGGCCGGTTTTTGTT
GGGTCTTGGGAGCGGGGACAGACAGGGGGGCGGGGAAAGAGCTCGCTCTT
GCTGGCTAGTTTACTGCTACTGCGTCTCCGCTCGTAGTGAATGTCCATCC
TACTGTATGGATGCAATTAGCTCTGCTCAAACCAAGACTACAAGAAACAA
GAACTATGCTTTGAACCTTAACGGGGTAACGTCGACGTCGGACAAAGACT
CTGTGGATGGGAGTGGCACTTCAAATGCGCCATCGAGTCGCCCGGCGTTG
GGGACGCGCGACTGCGCACAGACTTCAGGAGACTTTACATTGCAAGCATC
TTTGCATGAAAGCGACGTTTTTGCCTGGAGGAGAGTGATGCCACAGCAAC
CATTTTCTTCACCCTCGCAAGGCGGGGGCCCACTGCCCAACAGCTCCCCG
TCTTCACGATGTCACGAGCTGTCCGGCGACCACGAGCAGCAAGACGGCAG
GCCTGAGCACCCCTCTTCCTCTCAGCTCCATCACTACCATCACGCGATGC
GCACACACTTAAGTCAACAAGATTCTCAGGGCCACCACCTTCATCAACAG
CGCATCCAAGCGCCTGAGCAGCGTCCACAGCATCAGCACGACCACGGGAA
TGCATCCGGGCAGCACAGCATCTACCACCAGCAGCTGCCGCTACAAATGC
AGCAGGACGATTTGCAATCCTCCCAGCTGCAGTTGCAGCAACAGCACCAC
GCCGACCAATCAAAGCTGCAGTCCCATCCACACGACCAGCGGCATCTGCA
GCAACTTAATCATCATCATCATGGGGACCCACTGCGGCAGTTTCCACTAA
TATATGATTCCCAGCAACAGCGACAACGACACCAACAGCAGTCACAGCAC
CAACAGCCGCAACAACAACAACAACAACAGCAGCAGCAACAGCAACGACC
CCCACCATTGCCACCACCATCACCAGCACAGCAACTACAGGAGAGGCACA
GTGAGGACGTCGAAGGCGCAAATTATAGACCAAACCATTGCATCGAGCAC
GTTGTCGATAAAGTGTGGAGATCGGAAGGGGTAAAAATCAATGATATTGA
GCCGAGTAGAACAGACTTCAAATTGCAAGAGCTTCCCTTGGCGCGGGTCA
AGAAGGTGATGAAGCAGGATGACGAAATAGAGGGGATATCGCGTTTCCTC
GTGAGTATGGAGGCACTTATCATCATGGCTAAGGCCTGTGAATTATTTGT
TAATGAGCTGACCCTACGCGGCTGGCATATGACCGAGGAAAATCGGCGGC
GCACGCTGCAACGCATGCACCTGGCGCAGGCCATGATTAAATGCGAGATG
TTCGATTTCCTGATCGACATCGTGCCGCGAGACCAAGCAGTACCGGCCGT
CAGACGGGGCAAGGCCAATTGGGCGGACGCAGCAACGGAGGCGGAAGAAG
CCGTGAGTGGTCCTGTCGGCGTCGTTCAAAGTGGCAATGGTCAAAGGGAA
GCTGTTCGAGAGGTTGCTAAGCATTCTGATGCTCAAACTGGTGACGCGAC
AGCCCTGTCTGACAAGTCAGTTCGTGATCCAGCACGCGTTGCCGTCGAAA
GAGATGCGGCGGTTGCCGAGGAAAAGAGAGAAGATCCATTGGTAGTGGCT
CTCCTCCACACCGCCGGGCGTTCTGAGGTTGCCAGTCACTCGGTCCCTCT
TGTGGTATGGTTCAGGGGGCGGATACGTCAGAATTTAACGCAAGAAGACA
GCTATCAGGAGCAGCAGCAGCAGTTGTCTCCAAAGGAAGCGCAACGTGTC
GAGCCTCAGCGTCAGCATCTGGAGGGCAATGAGTACAGGTAA back to topprotein sequence of rna5304 >rna5304-protein ID=rna5304-protein|Name=rna5304|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MVRSVGVMPDGNRIISGGTDGTLRLWDIETGQNLAVVGGHLGHVLSLVAL
PDGRSVVSGDFDRQVKVWDLSASTSFVAKVGASMHPAEIRAMAIFPGTGR
IAVGYMGNEECTEIRVWDVAQGGIPAGEGAKPTEVPPLWSVPGHDDTVVS
LGVLGENGLVSSGFDRTVRVWSQLSCIEASDKEASLVIDSGENIAMAVMA
WEDGRGLAYGCDDGSLHVWDLKRRREALSHPHRHPDGVKALDISKDGSLL
CSAGADHALRLLRMDSASGVAP back to topmRNA from alignment at CM002465.1:667735..669800- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5304 ID=rna5304|Name=rna5304|organism=Nannochloropsis gaditana|type=mRNA|length=2066bp|location=Sequence derived from alignment at CM002465.1:667735..669800- (Nannochloropsis gaditana)
TCCAGTCCTCATCGATCGTGCAGAAGCGTCGAAAACAGTTTACACACTTG
CCTCAGGACCCAACAAGTAAGAGGCGGGGAGCTCGAGGTTCACCATCGTC
GCACGACCCGGTGACCCCAACAGCATGGGCCTGCCGGGCCACGAAGAGCT
AATAAATGCAGTGAAGTTCACGCCGAACGGCCGATTAATTGCCTCTGCCA
GTGATGATCGGACTGTAAGTAGCAACGTTGAGGCAGTGCATATGAAGGCA
AATGAAGTAAGGTACTAGCATCTTTTAAGGACATAATCTTTTCTAGTGCT
CAAATGCACGCAATTTACGTATGATCAAGCGTCAGATGAGCAAGTTACTC
GGAGTACGAACTGTTCAAAGCAAGCAACAAGACATAGCTGACGTTTAAGG
GGAGCGGATCTTGCACGACACCAGGCTGACCTTACTGTGTCCCCATATAT
GACAATAATCACCCATTGGGGTCCTTGTAATTTTTTTTCTCTCTTATTAG
GTGCGCATATGGAATGCGAACACAGGATCCTGCGTACGTGTCCTTAGTGG
CCACACCTCAATGGTGCGAAGCGTGGGGGTGATGCCGGACGGCAACCGCA
TCATCTCGGGAGGCACCGATGGGACGCTGAGGCTATGGGACATCGAGACT
GGTCAAAATCTAGCGGTTGTGGGTGGTCATCTGGGCCACGTATTGTCCCT
TGTAGCTTTGCCCGACGGGCGCAGCGTCGTATCTGGAGATTTCGACAGGG
TGGGTCGAAGGGCTGCCTTCCACGCGGGCTGGCAGTGTCACCCTGCCACG
CCTACATGTTATCATGCACTGCTTGCTACTATCACCTTGGATGAGGCTTC
TTGACTACATTGCGCTTTACCTCCCCAACACCCTTTGTTCTCAATTGTTC
CTTCCTCTTTTCTTCTCTTGCAATGGGCTACTTTTATCGCGAATACAACC
ATTCCATCATATTCATTTTTGTCTTTGCCACATCTACAGCAAGTCAAGGT
GTGGGACCTATCTGCCTCCACTTCGTTCGTCGCAAAGGTCGGTGCGAGCA
TGCACCCGGCCGAAATCCGCGCCATGGCAATATTTCCAGGCACCGGACGG
ATAGCTGTGGGGTACATGGGCAACGAGGAGTGCACGGAGATTCGCGTTTG
GGACGTGGCGCAGGGAGGCATCCCGGCGGGAGAAGGAGCGAAGCCTACTG
AGGTCCCCCCGCTCTGGAGCGTCCCAGGTCACGATGACACGGTGGTTAGT
CTGGGCGTGCTGGGCGAGAACGGATTGGTGTCCTCCGGCTTTGATCGCAC
GGTGAGTTGGAAGGCGCAGGCCCGAGGAGGCCTCCGGTCTGTCGGGAGGG
CCTTCACACCTCCGAAACACCGCATTGGCTCTTCATGTTCGGCGGAGGAC
GCTCAATGAGTGGCGAGGATCACGAAGTGGCCACAGCATTTTAATTTGAC
TTGTGTTCCGTTCCTGGTGTATGCCCAACCTCTTTAATTTTAACACCATT
CGCTTTCCATTTTTTTGACTTCTCTCATTCTCCTCATTCTCAATCGTCAG
GTCCGCGTATGGAGTCAGTTGTCATGCATCGAGGCATCTGACAAAGAGGC
TAGTCTCGTCATAGACTCGGGCGAGAACATTGCCATGGCGGTGATGGCTT
GGGAGGACGGTCGCGGTCTTGCGTACGGTTGTGACGGTGAGTGCGAAGAT
TCTTCAACAACAAAGTATATGTAGGCATGATGGCGAATACTTTCTAAAGC
TATCAATTCCTTTTAATCATGCGTAGACGGGAGCTTGCACGTGTGGGACT
TGAAGCGTCGCCGCGAGGCGTTGAGCCATCCTCACAGGCACCCTGATGGT
GTGAAAGCCCTGGACATCTCCAAGGACGGCAGCTTACTTTGCTCGGCAGG
TGCTGACCATGCCCTTAGATTGCTTCGTATGGACAGTGCAAGCGGCGTGG
CTCCTTGAAAGTGTGTGCTGTTGCCCGACACTATTAATTCCTGGGGTTGG
GGGGTAATTAGGCCGAGGAAACAGGAGCGTAGGACTGCTTGTAAAAAAAC
TAAACTCTTTGCCAGA back to topCoding sequence (CDS) from alignment at CM002465.1:667735..669800- >rna5304 ID=rna5304|Name=rna5304|organism=Nannochloropsis gaditana|type=CDS|length=3276bp|location=Sequence derived from alignment at CM002465.1:667735..669800- (Nannochloropsis gaditana)
ACGGGAGCTTGCACGTGTGGGACTTGAAGCGTCGCCGCGAGGCGTTGAGC
CATCCTCACAGGCACCCTGATGGTGTGAAAGCCCTGGACATCTCCAAGGA
CGGCAGCTTACTTTGCTCGGCAGGTGCTGACCATGCCCTTAGATTGCTTC
GTATGGACAGTGCAAGCGGCGTGGCTCCTTGAGTCCGCGTATGGAGTCAG
TTGTCATGCATCGAGGCATCTGACAAAGAGGCTAGTCTCGTCATAGACTC
GGGCGAGAACATTGCCATGGCGGTGATGGCTTGGGAGGACGGTCGCGGTC
TTGCGTACGGTTGTGACGCAAGTCAAGGTGTGGGACCTATCTGCCTCCAC
TTCGTTCGTCGCAAAGGTCGGTGCGAGCATGCACCCGGCCGAAATCCGCG
CCATGGCAATATTTCCAGGCACCGGACGGATAGCTGTGGGGTACATGGGC
AACGAGGAGTGCACGGAGATTCGCGTTTGGGACGTGGCGCAGGGAGGCAT
CCCGGCGGGAGAAGGAGCGAAGCCTACTGAGGTCCCCCCGCTCTGGAGCG
TCCCAGGTCACGATGACACGGTGGTTAGTCTGGGCGTGCTGGGCGAGAAC
GGATTGGTGTCCTCCGGCTTTGATCGCACGATGGTGCGAAGCGTGGGGGT
GATGCCGGACGGCAACCGCATCATCTCGGGAGGCACCGATGGGACGCTGA
GGCTATGGGACATCGAGACTGGTCAAAATCTAGCGGTTGTGGGTGGTCAT
CTGGGCCACGTATTGTCCCTTGTAGCTTTGCCCGACGGGCGCAGCGTCGT
ATCTGGAGATTTCGACAGGACGGGAGCTTGCACGTGTGGGACTTGAAGCG
TCGCCGCGAGGCGTTGAGCCATCCTCACAGGCACCCTGATGGTGTGAAAG
CCCTGGACATCTCCAAGGACGGCAGCTTACTTTGCTCGGCAGGTGCTGAC
CATGCCCTTAGATTGCTTCGTATGGACAGTGCAAGCGGCGTGGCTCCTTG
AGTCCGCGTATGGAGTCAGTTGTCATGCATCGAGGCATCTGACAAAGAGG
CTAGTCTCGTCATAGACTCGGGCGAGAACATTGCCATGGCGGTGATGGCT
TGGGAGGACGGTCGCGGTCTTGCGTACGGTTGTGACGCAAGTCAAGGTGT
GGGACCTATCTGCCTCCACTTCGTTCGTCGCAAAGGTCGGTGCGAGCATG
CACCCGGCCGAAATCCGCGCCATGGCAATATTTCCAGGCACCGGACGGAT
AGCTGTGGGGTACATGGGCAACGAGGAGTGCACGGAGATTCGCGTTTGGG
ACGTGGCGCAGGGAGGCATCCCGGCGGGAGAAGGAGCGAAGCCTACTGAG
GTCCCCCCGCTCTGGAGCGTCCCAGGTCACGATGACACGGTGGTTAGTCT
GGGCGTGCTGGGCGAGAACGGATTGGTGTCCTCCGGCTTTGATCGCACGA
TGGTGCGAAGCGTGGGGGTGATGCCGGACGGCAACCGCATCATCTCGGGA
GGCACCGATGGGACGCTGAGGCTATGGGACATCGAGACTGGTCAAAATCT
AGCGGTTGTGGGTGGTCATCTGGGCCACGTATTGTCCCTTGTAGCTTTGC
CCGACGGGCGCAGCGTCGTATCTGGAGATTTCGACAGGACGGGAGCTTGC
ACGTGTGGGACTTGAAGCGTCGCCGCGAGGCGTTGAGCCATCCTCACAGG
CACCCTGATGGTGTGAAAGCCCTGGACATCTCCAAGGACGGCAGCTTACT
TTGCTCGGCAGGTGCTGACCATGCCCTTAGATTGCTTCGTATGGACAGTG
CAAGCGGCGTGGCTCCTTGAGTCCGCGTATGGAGTCAGTTGTCATGCATC
GAGGCATCTGACAAAGAGGCTAGTCTCGTCATAGACTCGGGCGAGAACAT
TGCCATGGCGGTGATGGCTTGGGAGGACGGTCGCGGTCTTGCGTACGGTT
GTGACGCAAGTCAAGGTGTGGGACCTATCTGCCTCCACTTCGTTCGTCGC
AAAGGTCGGTGCGAGCATGCACCCGGCCGAAATCCGCGCCATGGCAATAT
TTCCAGGCACCGGACGGATAGCTGTGGGGTACATGGGCAACGAGGAGTGC
ACGGAGATTCGCGTTTGGGACGTGGCGCAGGGAGGCATCCCGGCGGGAGA
AGGAGCGAAGCCTACTGAGGTCCCCCCGCTCTGGAGCGTCCCAGGTCACG
ATGACACGGTGGTTAGTCTGGGCGTGCTGGGCGAGAACGGATTGGTGTCC
TCCGGCTTTGATCGCACGATGGTGCGAAGCGTGGGGGTGATGCCGGACGG
CAACCGCATCATCTCGGGAGGCACCGATGGGACGCTGAGGCTATGGGACA
TCGAGACTGGTCAAAATCTAGCGGTTGTGGGTGGTCATCTGGGCCACGTA
TTGTCCCTTGTAGCTTTGCCCGACGGGCGCAGCGTCGTATCTGGAGATTT
CGACAGGACGGGAGCTTGCACGTGTGGGACTTGAAGCGTCGCCGCGAGGC
GTTGAGCCATCCTCACAGGCACCCTGATGGTGTGAAAGCCCTGGACATCT
CCAAGGACGGCAGCTTACTTTGCTCGGCAGGTGCTGACCATGCCCTTAGA
TTGCTTCGTATGGACAGTGCAAGCGGCGTGGCTCCTTGAGTCCGCGTATG
GAGTCAGTTGTCATGCATCGAGGCATCTGACAAAGAGGCTAGTCTCGTCA
TAGACTCGGGCGAGAACATTGCCATGGCGGTGATGGCTTGGGAGGACGGT
CGCGGTCTTGCGTACGGTTGTGACGCAAGTCAAGGTGTGGGACCTATCTG
CCTCCACTTCGTTCGTCGCAAAGGTCGGTGCGAGCATGCACCCGGCCGAA
ATCCGCGCCATGGCAATATTTCCAGGCACCGGACGGATAGCTGTGGGGTA
CATGGGCAACGAGGAGTGCACGGAGATTCGCGTTTGGGACGTGGCGCAGG
GAGGCATCCCGGCGGGAGAAGGAGCGAAGCCTACTGAGGTCCCCCCGCTC
TGGAGCGTCCCAGGTCACGATGACACGGTGGTTAGTCTGGGCGTGCTGGG
CGAGAACGGATTGGTGTCCTCCGGCTTTGATCGCACGATGGTGCGAAGCG
TGGGGGTGATGCCGGACGGCAACCGCATCATCTCGGGAGGCACCGATGGG
ACGCTGAGGCTATGGGACATCGAGACTGGTCAAAATCTAGCGGTTGTGGG
TGGTCATCTGGGCCACGTATTGTCCCTTGTAGCTTTGCCCGACGGGCGCA
GCGTCGTATCTGGAGATTTCGACAGG back to top
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