EWM25379.1, cds5280 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|585107140|gb|EWM25379.1| (Protein of unknown function DUF1674 [Nannochloropsis gaditana]) HSP 1 Score: 337.035 bits (863), Expect = 4.934e-117 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 Query: 1 MLSHTGSCRRSAHRLLAMCFSSAPLNRASSAGFPISSSLSPGAVSSPGCFREERLSLRLSCHQFCSTSSLQQGAEDEAQATSPGPSNARVKEDEGGVIIEVGTTSQSAVKKDTCGEVEEAEDEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDFS 166 MLSHTGSCRRSAHRLLAMCFSSAPLNRASSAGFPISSSLSPGAVSSPGCFREERLSLRLSCHQFCSTSSLQQGAEDEAQATSPGPSNARVKEDEGGVIIEVGTTSQSAVKKDTCGEVEEAEDEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDFS Sbjct: 1 MLSHTGSCRRSAHRLLAMCFSSAPLNRASSAGFPISSSLSPGAVSSPGCFREERLSLRLSCHQFCSTSSLQQGAEDEAQATSPGPSNARVKEDEGGVIIEVGTTSQSAVKKDTCGEVEEAEDEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDFS 166
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|298707113|emb|CBJ29905.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 84.7297 bits (208), Expect = 5.104e-18 Identity = 41/62 (66.13%), Postives = 48/62 (77.42%), Query Frame = 0 Query: 106 QSAVKKDTCGEVEE--AEDEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 Q VK D CGE+E+ ++EMEEM GP+G+ EWGGPTRGG EPTRFGDWERKGRC+DF Sbjct: 71 QGPVKLDLCGEIEDDVGDEEMEEMLQEGPAGK-EWGGPTRGGVLGEPTRFGDWERKGRCSDF 131
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|1214698095|gb|OWZ11198.1| (hypothetical protein PHMEG_00015815 [Phytophthora megakarya]) HSP 1 Score: 70.0922 bits (170), Expect = 7.355e-13 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = 0 Query: 127 MFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 M +GPSG VE+GGPTRGG+ KEPTRFGDWERKGRC+DF Sbjct: 59 MVAIGPSG-VEYGGPTRGGKLKEPTRFGDWERKGRCSDF 96
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|301109291|ref|XP_002903726.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096729|gb|EEY54781.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 70.0922 bits (170), Expect = 8.221e-13 Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = 0 Query: 122 DEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 ++ EE +GP G VE+GGPTRGG+ KEPTRFGDWERKGRC+DF Sbjct: 55 NDAEETVAIGPLG-VEYGGPTRGGKLKEPTRFGDWERKGRCSDF 97
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|953499595|emb|CEG39021.1| (Uncharacterized conserved protein [Plasmopara halstedii]) HSP 1 Score: 69.3218 bits (168), Expect = 3.361e-12 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0 Query: 112 DTCGEVEEAEDEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 D + ++ ++E E V+ S E GGPTRGG+ KEPTRFGDWERKGRC+DF Sbjct: 67 DKSNDTDDYDNEDAEETVVIDSSNYEIGGPTRGGKFKEPTRFGDWERKGRCSDF 120
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|669144896|ref|XP_008608010.1| (hypothetical protein SDRG_04129 [Saprolegnia diclina VS20] >gi|530740176|gb|EQC38418.1| hypothetical protein SDRG_04129 [Saprolegnia diclina VS20]) HSP 1 Score: 68.1662 bits (165), Expect = 4.909e-12 Identity = 41/84 (48.81%), Postives = 52/84 (61.90%), Query Frame = 0 Query: 83 PGPSNARVKED-EGGVIIEVGTTSQSAVKKDTCGEVEEAEDEMEEMFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 P P AR D + E A+ DT + +E ED+ EEM +GP+G EWGGP+RGG++ EPTRFGDWE+KGRC DF Sbjct: 12 PTPMAARAFSDAPKSFVPEHDKPHARAIIVDTVLDDDEDEDDEEEMVTIGPAG-TEWGGPSRGGKYMEPTRFGDWEKKGRCMDF 94
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|1173951757|gb|OQR99564.1| (hypothetical protein ACHHYP_05758 [Achlya hypogyna]) HSP 1 Score: 68.1662 bits (165), Expect = 5.144e-12 Identity = 28/39 (71.79%), Postives = 34/39 (87.18%), Query Frame = 0 Query: 127 MFVMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 M +GP+G EWGGP+RGG++KEPTRFGDWE+KGRC DF Sbjct: 58 MVTIGPAG-TEWGGPSRGGKYKEPTRFGDWEKKGRCMDF 95
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|570316277|gb|ETO64225.1| (hypothetical protein F444_18197 [Phytophthora parasitica P1976] >gi|570970329|gb|ETP33448.1| hypothetical protein F442_18014 [Phytophthora parasitica P10297]) HSP 1 Score: 68.5514 bits (166), Expect = 5.204e-12 Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0 Query: 129 VMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 V+GPSG E+GGPTRGG+ KEPTRFGDWERKGRC+DF Sbjct: 85 VIGPSG-AEYGGPTRGGKLKEPTRFGDWERKGRCSDF 120
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|567950016|gb|ETK75736.1| (hypothetical protein L915_17693 [Phytophthora parasitica] >gi|567978691|gb|ETL29178.1| hypothetical protein L916_17581 [Phytophthora parasitica] >gi|570940063|gb|ETP05320.1| hypothetical protein F441_18039 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 68.5514 bits (166), Expect = 5.790e-12 Identity = 30/37 (81.08%), Postives = 34/37 (91.89%), Query Frame = 0 Query: 129 VMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 V+GPSG E+GGPTRGG+ KEPTRFGDWERKGRC+DF Sbjct: 85 VIGPSG-AEYGGPTRGGKLKEPTRFGDWERKGRCSDF 120
BLAST of EWM25379.1 vs. NCBI_GenBank
Match: gi|698786890|ref|XP_009826477.1| (hypothetical protein H257_03878 [Aphanomyces astaci] >gi|574119305|gb|ETV84785.1| hypothetical protein H257_03878 [Aphanomyces astaci]) HSP 1 Score: 67.3958 bits (163), Expect = 7.026e-12 Identity = 29/37 (78.38%), Postives = 34/37 (91.89%), Query Frame = 0 Query: 129 VMGPSGRVEWGGPTRGGRHKEPTRFGDWERKGRCTDF 165 V+GP+G VEWGGP RGG++KEPTRFGDWE+KGRC DF Sbjct: 55 VIGPAG-VEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 90 The following BLAST results are available for this feature:
BLAST of EWM25379.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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