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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100005g64.6695.mrna |
| Orig protein id | gnl|cribi|Naga_100005g64.6695 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:587768..589032 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5274 ID=rna5274|Name=rna5274|organism=Nannochloropsis gaditana|type=mRNA|length=1686bp
CTTGCGACATAAAGTGTCCATGAAAAACTCAAGCCAAGAAATCGATTCAC
CGAGACCTCAGCATCTCCAACCCATCCCTGCTTCCGGAGAGGCATCTTTT
TCAACGGCCTTGCAACGTAAATATGAAGATCTATTTCCGCCCACAGCTCA
AGTGAAACTAAAAGAAGCTTTACACGATAATGGCGTACTAGATGAGAACC
TTTTCTCAAAACACAAGGCTGCAACACGTGGGCGTCGTTCAGAAGCTGCT
CGCTCCTACAGCATTTTGCCTTTCCAGATCAAACGCCTTTTTTTCAGCCG
GAACGCGGGAGACATCCGACTAAACAATCGACTGCTTAAATTGTTGCATC
GTAATCCGCACGTTTATGCTATTGACGATTTTTTGTCCGGGACAGAGTTT
GAAAACTTGGGGCATTTGATTGACCAGCAGTTCGGCAAATTTCGTGCCTC
GTATACGGATTGCACCGTTGACGAGCAAGTAAGAAATGCAAGCAGAACCT
CGTCTTTTATTTCACTGCGCAAGGGTGGGGACAGTAAAGTGCGAGCAGTC
GAAAATCGTGCAGCCGAAATCGTGGGGCTGCCTCCAGAGAACACGGAGCC
TCTTCAGATAGTAGGTTATAGGCACAATGACTTCTTCGACGTTCACCACG
ACATGGGCACCTACAATAAAGACACAGGCGCCGTAGAAGCGGTGAGCCCG
AGGCGTCTTGTGACTTTTTTTGTCTACTTGAACAGTCTGCCCCGCGGACA
AGGCCATACTGTTTTCCCCAAACTTAATGGCGGTCGGTTTTCAATCAAAC
CCAAACGCCTGAGGGCACTTCTCTGGTGTAATGTCTTGGAAGACGGTAGT
CCAGACCCTCGCTTAATCCATCGCGGCGATCCTATCCGCAAGGAGGGTTT
CATGAAGTTTGCGATCAATATATGGATCACGGACAAGAATTTGCAGGCCC
TTGCCTTCTCCAATTCCGGGGTCGTTCTGGACCCTTCCAAGGTCATTTCA
GGCAAACGCACCATTCTTGCTTCCATCGATCCACCTTGTTGTATATGTAG
AAGCCATAAACAGCAGAACTTGTTCAAGACCTGTGACCACTGTGATCTCT
CCTATCACCGGCTTTGTCTCTCGCCCGAAGAGCGGCCTAGCGCTCCGAAC
GGTCCTCGCCGCTTTTGGACGTGCCCCAGGTGCCCTGGAAAGAGGCCGCG
GCCGGGGGACTTTTGCGAAGTCTGTGGTGGAGGCGATAGAGAACATCTGA
TCGTGCTCTGCGACTCGTGCGAACGGGGTTTTCATACCACATGTCTGGGA
GTGCGCAAAGTACCAAAAGAGGCGTATTTTTGTGACTCTTGTCGAGCGAA
AGAGAAGGTGAAAGCCCGCACGATTAGGTCGCGGGAGGAGGGCGCATGCC
ATATGTGTGGTAGTATTGACAGGCCACATCATATCTTGCTTTGCGATGGA
TGCGACGGAGGGTGGCATTTACAATGTGTAGGGCTCGCGCGGGTACCTCG
AGGAAGCTGGTTTTGCCGTTTGTGCACGAAGACTGCCAGTCGAAGGCGAA
AAGGTCCCGCAAAGAGGAGCAAAAAGTACGAAGCAAAGAGTAATAAGTGA
GTTGTGGACACTTACGGTGGATCTTGTAGGAAAAGTCTACGTATGAGTGC
AAAAAGAGCACTCATTTAAACACTCACTGGCTGAGA back to topprotein sequence of rna5274 >rna5274-protein ID=rna5274-protein|Name=rna5274|organism=Nannochloropsis gaditana|type=polypeptide|length=141bp
MIAKRACVIYIQRKAQQLSIYPGRSAILLFKDNIFLLTILPSGIVQMLRR
VIRVSLQGISQLARMDNLEIFHRPQPKLPPHRLLQSRRRHHNTGWTAPIR
FGPRQKQLARQHGCIVVVVAMEVIGPLHSKALIDLKQAEFR back to topmRNA from alignment at CM002465.1:587768..589032+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5274 ID=rna5274|Name=rna5274|organism=Nannochloropsis gaditana|type=mRNA|length=1265bp|location=Sequence derived from alignment at CM002465.1:587768..589032+ (Nannochloropsis gaditana)
TCATCTCGACATTTGCACATCAGACGACACACTCAAAATACTGTCAGTAC
CTGGAGCCGACATATGGTATGTGGAAAAGAATTGGCGGGTGCAGATGTTA
GCTTGGTTGCTCAtagctccttctcccacgaACTCAACTCACGCCCGATC
GAATACACTTCCATATCATTAAGTTGTTCTACTCATTTTTCAAGACACTT
GTCGGCAAGGAAGTGGCGGTTGAGCTAAAGAACGACGTGGAACTGACCGG
CAAATTACATTCAGTTGATCAGTACCTGAACGTGAAGCTAGAGGACGTAC
AGGTTGTGAAGAAGGAACGATACCCGCAATTGGTAAGTGAAGCGCTTCGA
CAAGGACTCAGGATACTTAAGTGTGCAACCATTCTGCGCGAATGGACGCC
CGAAGTGTATTTCTTCCTTACACCTTGCAGTAACAAGTATCTCTCTGAGA
TGGTCAAGAGGGTTCCCCTCTTCCGGTGCTTGTTACCGAGATTTAAGACG
CACCTCGTGTCCGTCCGGAACTCTGTCGCAACCGCTCGTTGAGGCACTTA
CACTATACGCACACCGTGATGCACGACACAGCTGGCTGTCAAGAATGTTT
TCATTCGTGGCTCGGTCATTCGCTTCATTCAGCTTCCAGCAAGTGATGTA
GACGTGCAATTGTTGCAAGACTCCTGCCGGAAGGATAATCaaagcgggaa
aggaagataGTGATTGAGTCGATGATTGCGAAGAGAGCCTGTGTAATTTA
TATTCAAAGGAAAGCCCAACAGCTGTCAATATACCCAGGTCGGTCGGCCA
TTCTTTTATTTAAAGACAACATTTTCTTGCTGACAATCCTTCCAAGCGGC
ATCGTTCAAATGCTTCGGAGGGTAATTCGTGTAAGCCTGCAAGGGATTTC
CCAGCTTGCTCGTATGGATAACCTCGAAATCTTTCACAGGCCGCAGCCCA
AACTCCCCccgcaccgcctcctccaaagccgtAGACGTCACCACAATACA
GGGTGGACAGCTCCCATCCGCTTTGGACCGCGCCAAAAGGCGAGTGGAGA
GGAAGTATTCTCTAAGTGTCTCCATATTCAGACGCGGTGGATCGATAACG
AAAACAGCAATCTTACCCAGCAACTCGCTCGGCAGCACGGTTGCATCGTT
GTAGTCGTAGCGATGGAAGTTATCGGGCCACTGCACTCCAAAGCGCTCAT
CGATCTCAAACAGGCGGAGTTTAGGTAAGTGCTTGCCGCCTTCCAATTCC
TGCGCGGGCGCCATC back to topCoding sequence (CDS) from alignment at CM002465.1:587768..589032+ >rna5274 ID=rna5274|Name=rna5274|organism=Nannochloropsis gaditana|type=CDS|length=852bp|location=Sequence derived from alignment at CM002465.1:587768..589032+ (Nannochloropsis gaditana)
ATGATTGCGAAGAGAGCCTGTGTAATTTATATTCAAAGGAAAGCCCAACA
GCTGTCAATATACCCAGGTCGGTCGGCCATTCTTTTATTTAAAGACAACA
TTTTCTTGCTGACAATCCTTCCAAGCGGCATCGTTCAAATGCTTCGGAGG
GTAATTCGTGTAAGCCTGCAAGGGATTTCCCAGCTTGCTCGTATGGATAA
CCTCGAAATCTTTCACAGGCCGCAGCCCAAACTCCCCccgcaccgcctcc
tccaaagccgtAGACGTCACCACAATACAGGGTGGACAGCTCCCATCCGC
TTTGGACCGCGCCAAAAGCAACTCGCTCGGCAGCACGGTTGCATCGTTGT
AGTCGTAGCGATGGAAGTTATCGGGCCACTGCACTCCAAAGCGCTCATCG
ATCTCAAACAGGCGGAGTTTAGGTAAATGATTGCGAAGAGAGCCTGTGTA
ATTTATATTCAAAGGAAAGCCCAACAGCTGTCAATATACCCAGGTCGGTC
GGCCATTCTTTTATTTAAAGACAACATTTTCTTGCTGACAATCCTTCCAA
GCGGCATCGTTCAAATGCTTCGGAGGGTAATTCGTGTAAGCCTGCAAGGG
ATTTCCCAGCTTGCTCGTATGGATAACCTCGAAATCTTTCACAGGCCGCA
GCCCAAACTCCCCccgcaccgcctcctccaaagccgtAGACGTCACCACA
ATACAGGGTGGACAGCTCCCATCCGCTTTGGACCGCGCCAAAAGCAACTC
GCTCGGCAGCACGGTTGCATCGTTGTAGTCGTAGCGATGGAAGTTATCGG
GCCACTGCACTCCAAAGCGCTCATCGATCTCAAACAGGCGGAGTTTAGGT
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