Naga_100005g23, gene5056 (gene) Nannochloropsis gaditana

Overview
NameNaga_100005g23
Unique Namegene5056
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:492759..498412 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100005g23
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:492759..498412 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL015ngnoL015Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G02290NO10G02290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5236rna5236-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5236rna5236Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5236

>rna5236-protein ID=rna5236-protein|Name=rna5236|organism=Nannochloropsis gaditana|type=polypeptide|length=1658bp
MEPWHLSLIQKKMKTRPTIARCWARKVLILGLIVASCHVQAFGPGTFLPT
ARSRASVPHVTVARRVQAFFAGHVSSNVARSSGSRHKSSPWLRPDTSCWS
STCNVDRSDWGPEHLVGERDACGVGFIADMTGKAGPGAVLSKALVALGCM
EHRGACSADQDSGDGAGVMTAVPWKLLGVEEADQAHTGVGMAFLPQDMQQ
AQEAMKVIEASARKKGFEFAGWREVPVNEEKLGKLAREAMPKIQQFFLRA
KGITGDALERALYLFRRSLVVCFREAGQMDLGKGTYLCSLSSRTIVYKGM
VRSVVLREFYSDLANPEYETRWAIYHRRFSTNTMPRWPLAQPMRLLGHNG
EINTLLGNINWARAHSSDLNQQCDFDKLVRPDNLSLLESCDTQGAEGLEP
VVDVAKSDSANLDSAFELLVRAGRDAAEGLMVLVPEAYTSLPDLESRPAL
QAFYDYHSGIQEAWDGPALLVFSDGKMMGAKLDRNGLRPARYLVTEDGLV
CMMSETGAVPIDEGRVKERGRLGPGDMIAVDLERGVFLHNDEIGQDVTRR
KPYGEWIERHSLSIPRQPFAQESMMDQVADLPLQLTKFGWSLEDTEMIIA
DMASTGKESTYCMGDDIPLAILSSRPHTLYNYFKQRFAQVTNPPIDPLRE
GTVMSLKVSLGRKGNVLEPNEENARLLRLESPLLNSAELDLVMSTPKFPS
RSLSTVYPLADGPEGLRAAVDRLCNEAVKTVSGGVEVLLLSDRLGSDLEG
ELTYIPPLLAVGAVHHRLIEEGLRMRASLVIETGQAWNTHQLACLIGYGA
SAVHPYLALQAVRDWHGEKKTQVQMESGVLPRLTLEQALLNYRDANEAGL
LKVMSKMGISLIESYMGAQIFEAIGIGHDLLQLGFRGTPSRVGGLSVSDL
AQEVGGFVAKALEMRGGAGSRKLENYGFYKFMVKGEYHHNSPQLSKLLHK
AVNGDGDISQYKLFSKAVAERPPTTLRDLLEIQSDRPPVALSDVEPAEAI
MRRFCTGGMSLGALSREAHETLAIAMNRIGGKSNSGEGGEDPVRFEPLED
VDQATGLSPRLPHLKGLRNGDIATSAIKQVASGRFGVTPEYLMNADQVEI
KIAQGAKPGEGGQLPGKKIDDYIAGLRSSKAGVTLISPPPHHDIYSIEDL
AQLIFDLHAINPRARVSVKLVAEVGIGTIAAGVSKANADVIQISGHDGGT
GASPLSSIKHAGSPWELGLAEVHRTLMENGLRGRVLLRVDGGFKTGYDIL
QAALMGGEEYGFGTIAMVAAGCIMARICHTNNCPVGVATQREDLRAKFPG
TPADVVNYFAMVAEEVRGLLAEFGYRSLDEVIGRADLLKPREDVVLTKTR
ALNMDFLTQLPDSRQDRAWLRHDGVHSNGPMLDDDIFESVAPAIAQHASH
REAIDIVNTDRAVGARLAGEIAKRYGNRGFKGQLDLRFRGSAGQSFGAFA
VAGMDVRLEGEANDYVGKGMNGGRVVIVPHPDFRKRTDVSFPDQVIAGNT
CLYGATGGTLYALGRAGERFAVRNSGAVAVVEGAGDHMCEYMTGGIVVSL
GRVGKNVGAGMTGGLAYVYEDDATAASSLPFDKLVNTGIVKTQRIQTKAG
EAQLRAILVDYLNATGSEKANVILKNWNAHVGKFHQVVPPAESSVPEVKD
ANVKASAE
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Synonyms
Publications