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Properties
| Property Name | Value |
|---|
| Product | l-ascorbate peroxidase |
| Orig transcript id | gnl|cribi|Naga_100005g10.6655.mrna |
| Orig protein id | gnl|cribi|Naga_100005g10.6655 |
| Gene | APX |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:466773..468401 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5223 ID=rna5223|Name=rna5223|organism=Nannochloropsis gaditana|type=mRNA|length=1395bp
GACAGGTAAGTGGCAAGCGTGGCCAGATCTTCAAGCGACGGTGCTGTGCG
TCCCAGGAGCGCCATTTGTGGACAGACAAGAAAGGAAAAGAAGAAATTTG
CGCGTCCGCTTGAGGAAAGGCTGTGCTGAAAGATGCCACATGCGAAAGAG
CCTGTGGCCGGGGCCCGGTTCCAGTCGCTCAGGCGGCGATATCAACGTCA
TCTCTTACTCGCCTGGCCGCATTGCGCTTGACTCAGTTGGGTCTCACAGC
ATATCGACGTTCATTCGTACTGTTCTGTGGTCAAGAGAAATAAGATTGTC
ATCGTCGCTCGCCCTCTAACTATCTTTCTCTCACCTGTGTTGTACCCCTC
CGTAGCACATTACCATGAAGAAACCTTGCTCTGTCCTCCTTCTCGTCAGC
ACGGCAGCTTTGTTGCTGCCCCTGCACGAAGCCTTCAAAATACCCATTGG
TGCACGCCTAGCCCGGACATCCTCGTCCTCAACATTAAAGCGGTGGCCAG
TTCCTCCATCCAGCAACCTGGTGCAGGGTGCTGGCGTCGTGTCGCAGGTC
TTACGCGCCTCCGACGCCAAGGGAGCAGAGGGGGACAGCGCTGGAGTCCA
ACCGTGGATTGAGCCCGCCTTCCACAATAAATTGAGCGTGCGAATCCTGG
CGGTGCTTGCAGGTATCTCCATCGCAATGAAGAACTCCGGCATGGCCCTT
CCCAAGTCGGCAGCCACGTACATTCACCTTCTCATGTTCGGCGCCAATTT
CGGGAGTGTCATGTACACCACTTTCGTCCTGGGGTTGGTTATGATCAAGC
ACTTGCCCCGACAGACGTTTGGGAGACTTCAGAGCAAGCTCTTCCCCATC
TATTTCGCCTGGTCCGCTTTGGCTTTGGCTCTGCAGCTCCTGACCGGCAA
GACCCTGGGCCTGCCCGCCAAGGCCATGCGCTGGCTCGCAGCCTCCCTGG
CCGCCGCCCTCATCAACTCACTCTTCTTGGAGCCGGCTTCGACTAAGGTC
ATGTTCCAGCGGTACGCTCTGGAGAAGCAGAACAGGCGGGAGGAGACCGA
GTACAAGGAGCTCGCCAAGCGCTTCGGGGCCCTCCACGGCGCATCCTCCT
TGGTCAACTTGGTCACGGTGGTGGGGGGCTTCGTCCACGCTTACTATCTA
AGCCTAATGCTCTAGAGCGGCCGGGCGACGGCGGTTGAAAGGGGATGGGC
GTGGCGTCAGGAAAGAAAAACAAAACGTACTCGTCTCGTCGGCGTAGGAG
CCTGAAATGATTTTTTGTTCCGTCATTACTCTCCCAGGGCCGGGCTCCAG
AAGCCTCGGGCCATTTCTCCCGGACTCTTTTGTCTCTCTTTCATGGCTCC
TATCAATCAGCATCTCAATAAAAATCATGCGAGTGTGGTCCTGTC back to topprotein sequence of rna5223 >rna5223-protein ID=rna5223-protein|Name=rna5223|organism=Nannochloropsis gaditana|type=polypeptide|length=343bp
MARLLFATSSVLLLQAALGFMPASKLAPAPRTAARTSVPSRSGLRMAATA
EEYKACYVDLLETVDKANCAPIVVRLAWHDAGTFNKANADKPFPDRGGAN
GSIRFDPELAHGANAGLGLALKLLEPVKKRHPNVGWADLMQAASAAGIEA
TGGPRIPMRYGRKDAAGPEDCPKEGNLPGANIPGQQTGPFPDGTPTPADH
LRKVFHRMGLSDQDIVALSGAHTLGRAYKDRSGLGKESTKFTEGDAAPRG
DGAKGYGRKGGQPWTEKWLKFDNSYFATMYDPNADPELLKLDTDLCIFGD
EGFRPHSMKYKDDQDAFFKDYCVSHAKLSELGVEWEVPGGVTF back to topmRNA from alignment at CM002465.1:466773..468401- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5223 ID=rna5223|Name=rna5223|organism=Nannochloropsis gaditana|type=mRNA|length=1629bp|location=Sequence derived from alignment at CM002465.1:466773..468401- (Nannochloropsis gaditana)
CTTGGATATCTTGACTCAGTCCGTCCACTAGATGCACTTGGGGATCCGGC
GCTGATGTCAATTAGAGCTGTAGAGCCGCGCCGGAATTGCGTACATCTTT
CTAAGCCCTTTTTTAATGCAGAGCGTGAATAAGTGTGGTGTCGATGACCT
GATCGGATGTCATATGTGCTCTTCCAACTACAAAATCGTCACTCCACCTC
AAGTGCAACAGACTGCTCCAACACGACTCACCTTCCACGTTGATAATTTC
ACCGCGCAGGTTTCGCAGTAATTAAAAAAAAGAAGATATGGCACGGCTAC
TTTTCGCAACATCCTCGGTTCTGCTGCTTCAGGCAGCCCTGGGCTTTATG
CCTGCAAGCAAGTTGGCTCCAGCACCACGCACTGCAGCTCGCACTTCCGT
CCCGAGCCGCTCTGGCCTCCGAATGGCTGCCACGGCAGAGGAGTACAAAG
CTTGCTATGTGGACTTACTCGAGACCGTGGATAAGGCTAACTGCGCTCCT
ATAGTGGTACGCCTGGCCTGGCACGACGCGGGTACCTTCAACAAGGCCAA
CGCAGACAAGCCCTTCCCCGACCGCGGGGGCGCTAACGGGTCCATCCGAT
TTGATCCCGAGCTCGCGCACGGGGCCAACGCCGGCCTGGGCCTCGCCCTT
AAGCTCCTGGAGCCGGTCAAGAAGAGGCACCCTAACGTGGGCTGGGCGGA
CCTGATGCAGGCAGCATCCGCAGCAGGCATCGAGGCCACTGGCGGCCCGC
GCATCCCCATGCGTTACGGCCGGAAAGACGCTGCGGGCCCCGAGGACTGC
CCCAAAGAGGGCAACTTGCCCGGTGCCAACATCCCGGGTCAACAAACGGG
CCCCTTCCCGGACGGTACCCCCACCCCCGCCGACCACCTGCGCAAGGTCT
TCCACCGGATGGGCCTCTCGGACCAGGACATCGTGGCGCTGTCGGGGGCA
CACACGCTGGGGCGGGCCTACAAGGACCGCTCGGGCCTGGGAAAGGAGTC
GACCAAGTTCACGGAGGGGGACGCGGCGCCTCGCGGGGACGGCGCCAAGG
GCTACGGGCGAAAGGGCGGGCAACCCTGGACAGAGAAATGGCTGAAATTC
GACAACTCCTACTTCGCGACCATGTACGACCCGAACGCGGACCCGGAGCT
CCTCAAATTGGACACTGACCTGTGCATTTTCGGCGACGAGGGATTCCGCC
CCCACTCCATGAAGTACAAGGACGACCAGGACGCTTTTTTCAAGGACTAC
TGCGTCTCCCACGCCAAGCTCTCCGAGCTGGGGGTGGAGTGGGAGGTCCC
TGGGGGCGTGACTTTCTAGAGAGGACGCTCGTGTCTGGGGCTTCGGAGTG
CGGAAGAGTGGCTCCGCCATGACCTTGGAGGCAAGTAGAGTGGCAGGGAA
AAAGATGCGGCATCGTTGTTCAAAGACGGGCGCGAGGCTGCTTAGGACTG
ACTGACTGAGAGGGGAGGACAGGACCACACTCGCATGATTTTTATTGAGA
TGCTGATTGATAGGAGCCATGAAAGAGAGACAAAAGAGTCCGGGAGAAAT
GGCCCGAGGCTTCTGGAGCCCGGCCCTGGGAGAGTAATGACGGAACAAAA
AATCATTTCAGGCTCCTACGCCGACGAGA back to topCoding sequence (CDS) from alignment at CM002465.1:466773..468401- >rna5223 ID=rna5223|Name=rna5223|organism=Nannochloropsis gaditana|type=CDS|length=1032bp|location=Sequence derived from alignment at CM002465.1:466773..468401- (Nannochloropsis gaditana)
ATGGCACGGCTACTTTTCGCAACATCCTCGGTTCTGCTGCTTCAGGCAGC
CCTGGGCTTTATGCCTGCAAGCAAGTTGGCTCCAGCACCACGCACTGCAG
CTCGCACTTCCGTCCCGAGCCGCTCTGGCCTCCGAATGGCTGCCACGGCA
GAGGAGTACAAAGCTTGCTATGTGGACTTACTCGAGACCGTGGATAAGGC
TAACTGCGCTCCTATAGTGGTACGCCTGGCCTGGCACGACGCGGGTACCT
TCAACAAGGCCAACGCAGACAAGCCCTTCCCCGACCGCGGGGGCGCTAAC
GGGTCCATCCGATTTGATCCCGAGCTCGCGCACGGGGCCAACGCCGGCCT
GGGCCTCGCCCTTAAGCTCCTGGAGCCGGTCAAGAAGAGGCACCCTAACG
TGGGCTGGGCGGACCTGATGCAGGCAGCATCCGCAGCAGGCATCGAGGCC
ACTGGCGGCCCGCGCATCCCCATGCGTTACGGCCGGAAAGACGCTGCGGG
CCCCGAGGACTGCCCCAAAGAGGGCAACTTGCCCGGTGCCAACATCCCGG
GTCAACAAACGGGCCCCTTCCCGGACGGTACCCCCACCCCCGCCGACCAC
CTGCGCAAGGTCTTCCACCGGATGGGCCTCTCGGACCAGGACATCGTGGC
GCTGTCGGGGGCACACACGCTGGGGCGGGCCTACAAGGACCGCTCGGGCC
TGGGAAAGGAGTCGACCAAGTTCACGGAGGGGGACGCGGCGCCTCGCGGG
GACGGCGCCAAGGGCTACGGGCGAAAGGGCGGGCAACCCTGGACAGAGAA
ATGGCTGAAATTCGACAACTCCTACTTCGCGACCATGTACGACCCGAACG
CGGACCCGGAGCTCCTCAAATTGGACACTGACCTGTGCATTTTCGGCGAC
GAGGGATTCCGCCCCCACTCCATGAAGTACAAGGACGACCAGGACGCTTT
TTTCAAGGACTACTGCGTCTCCCACGCCAAGCTCTCCGAGCTGGGGGTGG
AGTGGGAGGTCCCTGGGGGCGTGACTTTCTAG back to top
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