EWM25472.1, cds5197 (CDS) Nannochloropsis gaditana

Overview
NameEWM25472.1
Unique Namecds5197
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002465.1:428769..429027 +
Alignment locationCM002465.1:429483..430765 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM25472.1
Productgeranylgeranyl reductase
Orig transcript idgnl|cribi|Naga_100207g6.9438.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002465.1supercontigCM002465.1:428769..429027 +
CM002465.1supercontigCM002465.1:429483..430765 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0051188cofactor biosynthetic process
GO:0015995chlorophyll biosynthetic process
GO:0015979photosynthesis
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0045550geranylgeranyl reductase activity
GO:0016628oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
Vocabulary: INTERPRO
TermDefinition
IPR011774Geranylgeranyl_Rdtase_pln/cyn
IPR002938mOase_FAD-bd
IPR016040NAD(P)-bd_dom
IPR010253BchP_ChlP_pln/prok
IPR011777Geranylgeranyl_Rdtase_fam
Homology
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|585107235|gb|EWM25472.1| (geranylgeranyl reductase [Nannochloropsis gaditana])

HSP 1 Score: 1056.2 bits (2730), Expect = 0.000e+0
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0
Query:    1 MVLCYDRVVVYILAHACCLTKSIPYSLSPSHLSLFEQEAATMKSAFFVSSLLVGAQAFNPTLPLNNAFVQRQAARAEPIRAVRTRGDVDMKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPTTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            MVLCYDRVVVYILAHACCLTKSIPYSLSPSHLSLFEQEAATMKSAFFVSSLLVGAQAFNPTLPLNNAFVQRQAARAEPIRAVRTRGDVDMKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPTTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL
Sbjct:    1 MVLCYDRVVVYILAHACCLTKSIPYSLSPSHLSLFEQEAATMKSAFFVSSLLVGAQAFNPTLPLNNAFVQRQAARAEPIRAVRTRGDVDMKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPTTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|32307576|gb|AAP79193.1| (geranyl-geranyl reductase [Bigelowiella natans])

HSP 1 Score: 677.167 bits (1746), Expect = 0.000e+0
Identity = 318/424 (75.00%), Postives = 365/424 (86.08%), Query Frame = 0
Query:   91 KYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPTTEGGRYKIHYSNF-EKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            KYRV V+GGGPSGS AAE  AK+K I+T + ERKMDN KPCGGAIPLCMV EFDLP  +IDRKVRKMKMISP+NR VD+G+TLKPNEYIGM RREVLDGF+R R+V+ GA  INGLVTK+++P  +   Y IHY ++ +K  G AG P+T+E DV++GADGANSRVAKAIDAGEYNYAIAFQERI I EEKM +Y++LAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTV+NRP I  YQKAIR+RA D++  GKIIKVEAHPIPEHPRPRRV GR AL+GDAAGYVTKCSGEGIYFAAKSGRMAAQ+I +LM GGTRLPT++EI+DTYI DYD+ Y  TY VLD+LQ+VFYSSNAAREAFVE+C+S+YVQKVTFDSYLYK VQG NPV+DIKLLF T+G++ R  A  P+D+   NPVESLKRL
Sbjct:  117 KYRVAVIGGGPSGSAAAEIFAKEKGIDTFIFERKMDNVKPCGGAIPLCMVDEFDLPESVIDRKVRKMKMISPSNRVVDVGRTLKPNEYIGMCRREVLDGFMRNRSVDLGAVPINGLVTKIDVPRGDSDPYVIHYQDYGDKTAGGAGTPKTMEFDVLVGADGANSRVAKAIDAGEYNYAIAFQERIAIDEEKMEYYKDLAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVVNRPDIPKYQKAIRERAKDRLEGGKIIKVEAHPIPEHPRPRRVQGRAALVGDAAGYVTKCSGEGIYFAAKSGRMAAQAIVQLMQGGTRLPTQQEIEDTYIADYDKKYQATYVVLDLLQKVFYSSNAAREAFVEMCDSDYVQKVTFDSYLYKTVQGGNPVDDIKLLFSTVGSIFRAQATTPKDREFSNPVESLKRL 540          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|298708963|emb|CBJ30916.1| (geranylgeranyl reductase; geranylgeranyl diphosphate reductase; geranylgeranyl hydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0
Identity = 320/425 (75.29%), Postives = 366/425 (86.12%), Query Frame = 0
Query:   90 MKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPT-TEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            MKY+V VVGGGPSGSCAAE LA   +++  L ERKMDNAKPCGGAIPLCM+ EFDLP  IIDRKVRKMKMISPTNREVDIGQTL  +EYIGM RREV+DGF+R RA+  GA AINGLV  +++P   + G+YKIH++ +EKG+   GV ++ E D+IIG+DGANSRVAKA+DAG YNYAIAFQERIKISE+KM FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRP IK YQ AIR RAG+KI  GKIIK+EAHPIPE+ RPRRVVGR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA+++ + +    +LPTE ++K TY+KDYD+LY PTY VLDILQ+VFYS+NAAREAFVELCESEYVQKVTFDSYLYK+VQGNNPVED+KLLF T G+LMRG ALAP D    NPVESLKRL
Sbjct:   51 MKYKVAVVGGGPSGSCAAEILADCDDVDVTLFERKMDNAKPCGGAIPLCMIDEFDLPTSIIDRKVRKMKMISPTNREVDIGQTLGDDEYIGMVRREVMDGFMRDRAIEKGAHAINGLVNDIDVPADKDSGKYKIHFARYEKGS-RKGVQDSEEFDLIIGSDGANSRVAKAMDAGAYNYAIAFQERIKISEKKMEFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPKIKDYQDAIRKRAGEKIEGGKIIKIEAHPIPENYRPRRVVGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVQCIKQTGKLPTEAQLKKTYLKDYDKLYKPTYLVLDILQKVFYSNNAAREAFVELCESEYVQKVTFDSYLYKKVQGNNPVEDLKLLFGTFGSLMRGQALAPPDVTFSNPVESLKRL 474          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|224010635|ref|XP_002294275.1| (hypothetical protein THAPSDRAFT_10234 [Thalassiosira pseudonana CCMP1335] >gi|220970292|gb|EED88630.1| hypothetical protein THAPSDRAFT_10234 [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0
Identity = 313/428 (73.13%), Postives = 374/428 (87.38%), Query Frame = 0
Query:   90 MKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELP----TTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            MKY+V VVGGGPSG+CAAE  A++K I+TV+ ERKMDNAKPCGGAIPLCM+ EFD+P   +DRKVR+MK+ISP+N EVDIG TL+PNEYIGM RRE++D +LR RA++ GA  INGLVT +++P    TTE  +Y +HY  F+ G+ +AGVP+++  D+IIGADGANSRVAKA+DAGEYN+AIAFQERIKI++E+M+FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRPAIK YQKA+RDRAGDKIA GKIIKVEAHPIPEH RP RV GR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA++I +LM GG RLPT+ EI+ TY+ DYD+LYGPTYTVLDILQ+VFYS+N AREAFVELC S+YVQ+VTFDSYLYK+VQGNNP++DIKLL +TIG L++G ++A  D    NPVES+KRL
Sbjct:    1 MKYKVAVVGGGPSGACAAEIFAQEKGIDTVMFERKMDNAKPCGGAIPLCMIGEFDIPESTVDRKVRRMKLISPSNNEVDIGDTLQPNEYIGMCRREIMDKYLRDRAISYGAEPINGLVTAIDVPEDHKTTEK-QYTLHYQEFQAGS-SAGVPKSMNVDLIIGADGANSRVAKAMDAGEYNFAIAFQERIKITDEQMSFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAMRDRAGDKIAGGKIIKVEAHPIPEHYRPNRVQGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAEAIVKLMDGGKRLPTQNEIERTYLADYDKLYGPTYTVLDILQKVFYSNNGAREAFVELCNSKYVQQVTFDSYLYKKVQGNNPLDDIKLLGETIGCLIKGYSIAKPDAEFSNPVESMKRL 426          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|676393925|ref|XP_009040240.1| (hypothetical protein AURANDRAFT_31415 [Aureococcus anophagefferens] >gi|323449224|gb|EGB05114.1| hypothetical protein AURANDRAFT_31415 [Aureococcus anophagefferens])

HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0
Identity = 324/426 (76.06%), Postives = 363/426 (85.21%), Query Frame = 0
Query:   90 MKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELP--TTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            MKYRV VVGGGPSG+CAAE  A++ NIET ++ERK DNAKPCGGAIPLCMV EFDLPA+IIDRKVRKMKMISP+NREVDIG+TLK +EYIGM RREV+DG+LR RAV  GA  IN LVTK++ P  +   GRY IHYS  + G  A    E+++ DVIIGADGANSRVAKAIDAGEYN+AIAFQERIKI +EKM FY+ELAEMYVGDDVSPDFY WVFPKYDHVGVGTGTVINRP IKMYQ AIR+RAGDKIA GKIIKVEAHPIPEH RPRRV  R  L+GDAAGYVTKCSGEGIYFAAKSGRMAA+++ +LM GGT LPTE+ I   YIK YD LYGPTYTVLDILQ+VFY++NAAREAFV++C+SEYVQ VTF SYLYKR+   NPVEDIKLLF T+G+L+RG A+A  DKP  NPVESLKRL
Sbjct:    1 MKYRVAVVGGGPSGACAAEICAQEPNIETYIIERKFDNAKPCGGAIPLCMVDEFDLPADIIDRKVRKMKMISPSNREVDIGKTLKEDEYIGMCRREVMDGYLRDRAVEYGAIPINALVTKIDTPADSDSQGRYTIHYSRNDLGRKAP--EESLDVDVIIGADGANSRVAKAIDAGEYNFAIAFQERIKIDDEKMAFYDELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVINRPGIKMYQDAIRERAGDKIAGGKIIKVEAHPIPEHYRPRRVKNRAMLVGDAAGYVTKCSGEGIYFAAKSGRMAAEAVVKLMKGGTVLPTEEGITAEYIKPYDGLYGPTYTVLDILQKVFYTNNAAREAFVDMCQSEYVQDVTFQSYLYKRLVTPNPVEDIKLLFGTVGSLLRGRAIATPDKPFSNPVESLKRL 424          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|1072236925|gb|OEU21653.1| (geranylgeranyl reductase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0
Identity = 309/469 (65.88%), Postives = 385/469 (82.09%), Query Frame = 0
Query:   48 VSSLLVGAQAFNPTLPLNNAFVQRQAARAEPIRAVRTRGDVDMKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPT---TEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            +++ +  A AF P+    ++F+ + +       AV +  +++M+Y+V V+GGGPSG+CAAE  A++++I+TV+ ERKMDNAKPCGGAIPLCMV EFD+P  ++DRKVR+M ++SPT  EV IG TL+ +EYIGM RRE++D +LR RA+  GA  +NGLVT++++P    T   RY +HY  FE G  ++G P+++E D+I+GADGANSRVAKA+DAGEYN+AIAFQERIKI ++KM  YEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRPAIK YQKAIRDRAGDKIA GKIIKVEAHPIPEH RPRRV GR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAAQ I +LM GG RLPT++E++ TY+K YD+ YGPTY VLDILQ+VFYS+N AREAFVELC+S+YVQ+VTFDSYLYKRVQGNNP++DIKLL +TIG L++G + A  D    NP+ES KRL
Sbjct:    8 LTTFVSAASAFTPS----SSFLGKTSVAQN---AVSSGSNMEMRYKVAVIGGGPSGACAAEIFAQERSIDTVMFERKMDNAKPCGGAIPLCMVGEFDIPETVVDRKVRRMNLVSPTGAEVSIGDTLQADEYIGMCRREIMDKYLRDRAIEYGAECVNGLVTRIDVPADHKTSDSRYTLHYQQFETGK-SSGTPKSMEVDLIVGADGANSRVAKAMDAGEYNFAIAFQERIKIPDDKMALYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAIRDRAGDKIAGGKIIKVEAHPIPEHYRPRRVQGRMALVGDAAGYVTKCSGEGIYFAAKSGRMAAQEIIKLMDGGKRLPTQEEMEKTYLKKYDKAYGPTYAVLDILQKVFYSNNGAREAFVELCDSKYVQQVTFDSYLYKRVQGNNPLDDIKLLGETIGCLIKGYSNAKPDAVFSNPIESQKRL 468          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|1200219132|gb|OUT43385.1| (geranylgeranyl reductase [Phycisphaera sp. TMED9])

HSP 1 Score: 656.366 bits (1692), Expect = 0.000e+0
Identity = 319/426 (74.88%), Postives = 362/426 (84.98%), Query Frame = 0
Query:   90 MKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELPT--TEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            MKYRV V+GGGPSG+CAAE  A++ NIET ++ERKMDNAKPCGGAIPLCMV EFDLP+EIIDRKVRKMKMISP+N EVDIG TLK +EYIGM RREV+DG+LR RAV  GA  IN LVT ++ P    + GRY IHYS  + G  A    ET++ DVIIGADGANSRVAKAIDAGEYN+AIAFQERIKI +EKM FY+ELAEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRP IKMYQ AIR+RAGDKIA GK+IKVEAHPIPEH RPRR+  R  L+GDAAGYVTKCSGEGIYFAAKSGRMA +++ + MAGGT+LPTE E++D YIK YD+LY PTYTVLDILQ+VFY++NAAREAFV++C SEYVQ VTF SYLYKR+   NPVEDIKLLF T+G+L+RG A+A  DKP  NPVESLKRL
Sbjct:    1 MKYRVAVIGGGPSGACAAEICAQEPNIETYIIERKMDNAKPCGGAIPLCMVDEFDLPSEIIDRKVRKMKMISPSNVEVDIGSTLKDDEYIGMCRREVMDGYLRDRAVKLGAEPINALVTSIDCPAPGDDNGRYTIHYSRNDLGRKAPD--ETLDVDVIIGADGANSRVAKAIDAGEYNFAIAFQERIKIDDEKMAFYDELAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPGIKMYQDAIRERAGDKIAGGKVIKVEAHPIPEHYRPRRLKHRAMLVGDAAGYVTKCSGEGIYFAAKSGRMAGEAVVKAMAGGTKLPTEAELEDLYIKPYDKLYFPTYTVLDILQKVFYTNNAAREAFVDMCRSEYVQDVTFQSYLYKRLVTPNPVEDIKLLFGTVGSLLRGRAIATPDKPFSNPVESLKRL 424          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|1210520632|dbj|GAX20625.1| (geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [Fistulifera solaris])

HSP 1 Score: 651.358 bits (1679), Expect = 0.000e+0
Identity = 312/430 (72.56%), Postives = 360/430 (83.72%), Query Frame = 0
Query:   88 VDMKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELP----TTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            +DMKY+V VVGGGPSG+CAAE  A++K I+TVL+ERK+DNAKPCGGAIPLCMV EFDLP  ++DRKVR+M ++SPT  EV IG TLKP+EYIGM RRE+LD +LR RA   GA  +NGLVT +++P    T E  RY IHY  + +G+  AGV +T++ DVI+GADGANSRVAKA+DAG YN+AIAFQERIKI +EKM FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRPAIK YQKAIRDRAGDKIA GKIIKVEAHPIPEH RPRRV GR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA+ I  LM GG+RLP++ EI+ TYIK YD LYGPTY VLDILQRVFYS+N AREAFVELCES+YVQ+VTFDSYLYK VQGNNP++D+KLL  TI +L+ G   A  D    NP ES KR+
Sbjct:   36 LDMKYKVAVVGGGPSGACAAEIFAQEKGIDTVLIERKLDNAKPCGGAIPLCMVGEFDLPESVVDRKVRQMNLVSPTGVEVSIGSTLKPDEYIGMCRREILDQYLRDRAQKYGAEIVNGLVTSIDVPADHKTNEDSRYTIHYQEYTEGS-KAGVAKTMDVDVIVGADGANSRVAKAMDAGLYNFAIAFQERIKIPDEKMKFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAIRDRAGDKIAGGKIIKVEAHPIPEHYRPRRVQGRIALVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIVALMKGGSRLPSQAEIESTYIKKYDNLYGPTYAVLDILQRVFYSNNGAREAFVELCESKYVQQVTFDSYLYKTVQGNNPLDDLKLLGTTIKSLIGGYKKAKPDAVFSNPEESKKRI 464          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|873235656|emb|CEL99921.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 650.973 bits (1678), Expect = 0.000e+0
Identity = 321/427 (75.18%), Postives = 372/427 (87.12%), Query Frame = 0
Query:   89 DMKYRVVVVGGGPSGSCAAEELAKDKN-IETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELP-TTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            + KYRV V+GGGP+G+ AAE  A++ + +ET ++ERKMDN KPCGGAIPLCMV EF+LP  I+DRKVRKMKMISP+NREVD+G+TL P+EYIGMTRREVLD F+R RAV  GA AINGLVTKV+LP +++ GRY IH  NF+KG    GV ET+E D+IIGADGANSRVAK+I AGEYNYAIAFQERIKI +E+M +YEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIK YQKAIRDRA +++  G+++KVEAHPIPEH RP+RVVGRVAL+GDAAGYVTKCSGEGIYFAAKSGRMAA+ I  +M    RLPTE+EIKDTY+K YDR YGPTYTVLD+LQ+VFY++NAAREAFVELCE +YVQKVTFDSYLYK+VQGN+P+ DI LLFKTIG+L+RGN  AP DK + NPVES KRL
Sbjct:   63 EAKYRVAVIGGGPAGASAAEIFAENGDMVETFMVERKMDNCKPCGGAIPLCMVEEFNLPENIVDRKVRKMKMISPSNREVDVGKTLLPHEYIGMTRREVLDKFMRDRAVEKGAVAINGLVTKVDLPESSDSGRYVIHLKNFDKGDKGTGVSETLEVDMIIGADGANSRVAKSIGAGEYNYAIAFQERIKIPDEQMKYYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKEYQKAIRDRAAERLRGGELLKVEAHPIPEHYRPKRVVGRVALVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIMGVMKATGRLPTEQEIKDTYLKKYDRAYGPTYTVLDLLQKVFYTNNAAREAFVELCEDDYVQKVTFDSYLYKKVQGNDPLSDIGLLFKTIGSLIRGNVYAPPDKTISNPVESKKRL 489          
BLAST of EWM25472.1 vs. NCBI_GenBank
Match: gi|1210531219|dbj|GAX10320.1| (geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase [Fistulifera solaris])

HSP 1 Score: 649.818 bits (1675), Expect = 0.000e+0
Identity = 312/430 (72.56%), Postives = 360/430 (83.72%), Query Frame = 0
Query:   88 VDMKYRVVVVGGGPSGSCAAEELAKDKNIETVLLERKMDNAKPCGGAIPLCMVSEFDLPAEIIDRKVRKMKMISPTNREVDIGQTLKPNEYIGMTRREVLDGFLRQRAVNTGATAINGLVTKVELP----TTEGGRYKIHYSNFEKGTGAAGVPETIEADVIIGADGANSRVAKAIDAGEYNYAIAFQERIKISEEKMNFYEELAEMYVGDDVSPDFYAWVFPKYDHVGVGTGTVINRPAIKMYQKAIRDRAGDKIANGKIIKVEAHPIPEHPRPRRVVGRVALIGDAAGYVTKCSGEGIYFAAKSGRMAAQSIRELMAGGTRLPTEKEIKDTYIKDYDRLYGPTYTVLDILQRVFYSSNAAREAFVELCESEYVQKVTFDSYLYKRVQGNNPVEDIKLLFKTIGALMRGNALAPRDKPVYNPVESLKRL 513
            +DMKY+V VVGGGPSG+CAAE  A++K I+TVL+ERK+DNAKPCGGAIPLCMV EFDLP  ++DRKVR+M ++SPT  EV IG TLKP+EYIGM RRE+LD +LR RA   GA  +NGLVT +++P    T E  RY IHY  + +G+  AGV +T++ DVI+GADGANSRVAKA+DAG YN+AIAFQERIKI +EKM FYEE+AEMYVGDDVSPDFY WVFPKYDHVGVGTGTV+NRPAIK YQKAIRDRAGDKIA GKIIKVEAHPIPEH RPRRV GR+AL+GDAAGYVTKCSGEGIYFAAKSGRMAA+ I  LM GG+RLP++ EI+ TYIK YD LYGPTY VLDILQRVFYS+N AREAFVELCES+YVQ+VTFDSYLYK VQGNNP++D+KLL  TI +L+ G   A  D    NP ES KR+
Sbjct:   38 LDMKYKVAVVGGGPSGACAAEIFAQEKGIDTVLIERKLDNAKPCGGAIPLCMVGEFDLPESVVDRKVRQMNLVSPTGVEVSIGSTLKPDEYIGMCRREILDQYLRDRAQQYGAEIVNGLVTSIDVPADHKTNEDSRYTIHYQEYTEGS-KAGVAKTMDVDVIVGADGANSRVAKAMDAGLYNFAIAFQERIKIPDEKMKFYEEMAEMYVGDDVSPDFYGWVFPKYDHVGVGTGTVVNRPAIKQYQKAIRDRAGDKIAGGKIIKVEAHPIPEHYRPRRVQGRIALVGDAAGYVTKCSGEGIYFAAKSGRMAAEEIVALMKGGSRLPSQAEIESTYIKKYDNLYGPTYAVLDILQRVFYSNNGAREAFVELCESKYVQQVTFDSYLYKTVQGNNPLDDLKLLGTTIKSLIGGYKKAKPDAVFSNPEESKKRI 466          
The following BLAST results are available for this feature:
BLAST of EWM25472.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107235|gb|EWM25472.1|0.000e+0100.00geranylgeranyl reductase [Nannochloropsis gaditana... [more]
gi|32307576|gb|AAP79193.1|0.000e+075.00geranyl-geranyl reductase [Bigelowiella natans][more]
gi|298708963|emb|CBJ30916.1|0.000e+075.29geranylgeranyl reductase; geranylgeranyl diphospha... [more]
gi|224010635|ref|XP_002294275.1|0.000e+073.13hypothetical protein THAPSDRAFT_10234 [Thalassiosi... [more]
gi|676393925|ref|XP_009040240.1|0.000e+076.06hypothetical protein AURANDRAFT_31415 [Aureococcus... [more]
gi|1072236925|gb|OEU21653.1|0.000e+065.88geranylgeranyl reductase [Fragilariopsis cylindrus... [more]
gi|1200219132|gb|OUT43385.1|0.000e+074.88geranylgeranyl reductase [Phycisphaera sp. TMED9][more]
gi|1210520632|dbj|GAX20625.1|0.000e+072.56geranylgeranyl diphosphate/geranylgeranyl-bacterio... [more]
gi|873235656|emb|CEL99921.1|0.000e+075.18unnamed protein product [Vitrella brassicaformis C... [more]
gi|1210531219|dbj|GAX10320.1|0.000e+072.56geranylgeranyl diphosphate/geranylgeranyl-bacterio... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna5209rna5209Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications