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Properties
| Property Name | Value |
|---|
| Product | Mpv17/PMP22 |
| Orig transcript id | gnl|cribi|Naga_100032g47.272.mrna |
| Orig protein id | gnl|cribi|Naga_100032g47.272 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002465.1 | supercontig | CM002465.1:382511..384004 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5192 ID=rna5192|Name=rna5192|organism=Nannochloropsis gaditana|type=mRNA|length=2201bp
CTAGTGTAAAATACACTGCGCTCAAGCGTTGCCCGGAACCAATATCCTTC
ATGCGTCCATAGCGATTCATTAACATATCGCGCTGGTCGTGTGTTGGCTC
GATTTTTCCTCAGACTGTGGACGTTGAAGTCCTCAGCGACTCGTGCTGGA
ATGGCTTGAACGAGACCCGTATCGGCTGTTTTCATAACGTACCCTGGACG
TCGACAACGCAGTAAAACTAGACTGCATGGTTTGTCGTCAATCATGACAC
TTCTACGCTACCGTTTGTGCGTCGTTTTCTTCGCGTCCCACATTCACAAC
TCCCTATCTGATGTAAACTAGCGGATGTTCCTGGCAGTGTGCTTCCGGGT
GTTATTGTCCTTCATCTCACGCTACGAGTTCAGGCCCAGCTTGCTCACCA
TCGTGCAAACCAACTCTAAAACAGGCCATGATGGCTTGTAAAGCTCTTGT
TATTGGCTTCCTAGGCATCGCAAACGAAGTCACCGCCATTTCCTCCACTG
TATCCGGTTTCTGCTTTCGGCGTGCGTTCTTCACGACACGACGCGCGTCA
TCATTCAGTGCTGCCGCTCGCATGACCACTCAAAAGCACCCACGCGCATT
ATTCTTGAACCCTGAGAATCAGCACGCAGTGGATGAGGCTCGCCGGCGGC
ACTATCGGGCGAGCAGTACAGCCTTGCATTCGTCCTCCTCCTCCTCCCCC
AACCCCTCCTCCCTCTCCTTCTCCTCCAAAGAAGACTACCTGGCACATCT
CAAGCGCATTGGTCAGCTGCCGGCAGGTTTTAAATGCGGCACGTCTTGGA
TTTCATTCACCCCCGTTGAAGCCAATTTTCCGTCGCGCATGAACGTGACG
CTCATTGCTCTTGACGAGCCAACCGATAAATTCGCAATCGCATTCACCAA
AAATGCGTTTCCCGGGGCCCCCATCCGTGTGGGACGCGAGCGCCTCAAAG
AGACGCACCTTCAAGCCATCGTGGTGAACAACAAGATCAGCAACGTGTGC
CCGGGGGGGGAGGGCGACGGGGGAGTCGGCGACGCGGAAGAAGTCTGCCA
GGCCGTGGCCCGACGACTCGGGCTGCCGTCCGGAAAGCTGGTACTACCTA
GCTCCACGGGCGTCATCGGGTGGCGATTGCCCCGCCAAGCCATCATTGAC
GCCGTCCCCCGGGTCTTGGAGACGATGCAGGCGGCCTCGGTCGTGCCCGC
GGCCGCCGGGATCCTCACCACGGACCGGTACCCCAAGGTACGCGCCGCCA
CGGTGGCGGGGGGGAAAATCGTCGGCATCGCCAAAGGTGCCGGCATGATC
GAGCCCAATCTCGCCACCATGCTCGTCTACCTCTTGACGGACCTGGCCCT
GCCCCGCGATGTCCTCCGGGCCTGGCTCCCGGAGGTGGTGGGCGGGAGCT
TCAACTGCATCAGCGTCGACAGCGACCAGAGCACGTCCGACACGGTCGCT
CTCGTCTCCTCGGGCAAGGTGGCAGTCTCCGAGTCGGACTACCCCGCCAT
CAAAGCCTCCCTCACGTCCCTGGCCCAGCGCCTGGCCGAGGATATTGTGC
GCAACGGGGAGGGTACCAACCATGTCATCGAACTGCACGTCTCCAACGCC
CCCTCCGTGGAAGTAGCGCGCGCCCTGGGGAGGCACGTGATCAACTCACC
TTTGCTTAAGTGCGCGATCGCGGGGAATGACCCCAACGTAGGGCGTCTGG
CGGCGGCCGTGGGCAGCTATGTGGGGAATCAGGGCCTGACTGAAGGGCTG
CGGCTGGAAAGGTGTCGCCTCTTGATGGGCGGGCAGGTGGTGTTCAAGGG
GGGGGCCTTCGAGCTCGATCCTGAGAAGGAGGCTCTCTTGGTCGAGCATA
TGAAGGACGCGCAGCTTGACCCGGGCCCTTTGACAATGGACAGTGGCTCG
CATGTCACCTTTCCGGCCCACGAGAAGAATGTGAAAGTAGAAGTAGACCT
AGGGGAGCAGGCGGGGAAGGGCGTGGGACTGACACTGTACGGTAGTGATT
TGACTTACGCTTATGTCGCGGAGAACGCTGATTATAGATCGTGAGGGTCA
AGGCGGGGAGGGCGGGGGTATTGGATTCTTGGGGAGGCTACAGCGATAAG
GAGGGAAAACTGCCGGAGTGGCATGGCTCCAGTATTCACACGCAGGCTGA
TTCTTTTCACATGGCCGTTTCATTGCTTGTGTACACTCATCTATGTATAT
T back to topprotein sequence of rna5192 >rna5192-protein ID=rna5192-protein|Name=rna5192|organism=Nannochloropsis gaditana|type=polypeptide|length=248bp
MKYTNKLFFLSARGDWFKRTCGTTRLPSRLLTAPSNCNTTRKIVKSTEAT
SSPFLSPWAIYSRWLKDHPVKTKLLTSSFIMGAGDVACQFLTRYEKQQER
ATDLPNVARSSPTPTLPYDWYRTAKFFLLGGVLVGPALHHWYSFLIRLAP
VQNTSGALKRLAVDQCIFAPAFIPVFFSGLQFLDGNFDMDQLRRKLKRDY
KETLIANWAVWIPAMMVNFRFVPQHYQVLYSNAVGFCWNIFLSAISHK back to topmRNA from alignment at CM002465.1:382511..384004+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5192 ID=rna5192|Name=rna5192|organism=Nannochloropsis gaditana|type=mRNA|length=1494bp|location=Sequence derived from alignment at CM002465.1:382511..384004+ (Nannochloropsis gaditana)
GAAACACCAAGTCATGGTCAGTCTTCCGGGTGACGGGAGGTTTTTCAGCG
ACATCCACACGCCTAGAATGACACCAATAAGAAAAAACTGCGCGACACTG
CGTACCTGCGCGCGTTGATGAGGCATGAGAAAATGGTCATGATATGTACA
AGATGAGGTATTGATGAACTCATTTCCCCCGAATTTCAGATTTAAGACAT
AGAATATACCTGCTGGTGGGCAAGAATAGGGTGTGTGGTCCGTGCGGCTT
TGGGAGGTGCTGACCTGCAACCGTCGAAAACCTGCATCTGAGTCTTAAGA
GATTCGACTACACGGCAGCAATATTTAAGCATGAAGTACACAAACAAATT
GTTCTTTTTGTCTGCGCGCGGGGATTGGTTCAAGAGGACTTGCGGGACCA
CACGACTGCCGAGTCGTCTCCTAACTGCTCCAAGCAACTGTAACACCACC
AGGAAAATTGTCAAATCTACCGAGGCCACTTCATCACCATTCCTCTCACC
CTGGGCTATCTATAGCCGCTGGTTGAAAGACCATCCAGTGAAAACAAagc
tcctcacctcctctttcatcaTGGGCGCGGGCGACGTGGCGTGCCAGTTT
CTCACCCGATATGAAAAGCAGCAAGAACGTGCTACAGACCTCCCGAATGT
GGCACGTTCGTCTCCCACTCCCACTCTTCCTTACGACTGGTACCGCACCG
CTAAATTTTTCCTGCTGGGAGGTGTCCTTGTCGGGCCCGCTCTGCACCAC
TGGTATTCGTTCCTTATTCGGCTAGCCCCTGTTCAAAATACTTCTGGCGC
TCTCAAGCGTTTGGCTGTCGATCAGTGCATATTTGCCCCCGCTTTCAtcc
ctgtcttcttctcaGGTCTACAATTCTTGGATGGAAATTTCGACATGGAC
CAGCTCCGGCGTAAGTTGAAGAGAGACTACAAGGAGACCCTGATCGCAAA
TTGGGCGGTGTGGATACCGGCCATGATGGTCAACTTCCGCTTTGTCCCTC
AGCACTACCAGGTCTTGTACAGCAATGCCGTCGGATTTTGTTGGAATATT
TTTTTGAGTGCAATCAGCCATAAGTAAGTAAGACTGGAAAATGCATCGCA
CGAAGACATCCTTAGATGCTTTACTCTATTAATGCATGTGGTATCTGGGG
AGGACTGAAAATGTCTATGAAATGCAAGATTTGATGCATGTAAATAAAGC
AGGAGATAACAATGTACAGGCCTTGGGACTCAGTAAGAAGAAAATGCAGA
AAGACATAATGTGCATATGGAAGGGTTTAGAGTTAGGAAGAAAGTGTTGA
TAGAGCGGGGGAAAGCTTCATCTCTTACTAGAGTTGCCGTTGCTCTAGTG
AAGAGGCTGTAATAAGACGTACAATGTCTGAGCAATAGTAAAATCTACCA
GCAAAAGTCAACTTGTGAAAAGACATCATAGCATGGAGAAGGATCCCTTC
CACAACATAACGAGTGCACCCGAAAGAAGTTCTCACATTCCACA back to topCoding sequence (CDS) from alignment at CM002465.1:382511..384004+ >rna5192 ID=rna5192|Name=rna5192|organism=Nannochloropsis gaditana|type=CDS|length=747bp|location=Sequence derived from alignment at CM002465.1:382511..384004+ (Nannochloropsis gaditana)
ATGAAGTACACAAACAAATTGTTCTTTTTGTCTGCGCGCGGGGATTGGTT
CAAGAGGACTTGCGGGACCACACGACTGCCGAGTCGTCTCCTAACTGCTC
CAAGCAACTGTAACACCACCAGGAAAATTGTCAAATCTACCGAGGCCACT
TCATCACCATTCCTCTCACCCTGGGCTATCTATAGCCGCTGGTTGAAAGA
CCATCCAGTGAAAACAAagctcctcacctcctctttcatcaTGGGCGCGG
GCGACGTGGCGTGCCAGTTTCTCACCCGATATGAAAAGCAGCAAGAACGT
GCTACAGACCTCCCGAATGTGGCACGTTCGTCTCCCACTCCCACTCTTCC
TTACGACTGGTACCGCACCGCTAAATTTTTCCTGCTGGGAGGTGTCCTTG
TCGGGCCCGCTCTGCACCACTGGTATTCGTTCCTTATTCGGCTAGCCCCT
GTTCAAAATACTTCTGGCGCTCTCAAGCGTTTGGCTGTCGATCAGTGCAT
ATTTGCCCCCGCTTTCAtccctgtcttcttctcaGGTCTACAATTCTTGG
ATGGAAATTTCGACATGGACCAGCTCCGGCGTAAGTTGAAGAGAGACTAC
AAGGAGACCCTGATCGCAAATTGGGCGGTGTGGATACCGGCCATGATGGT
CAACTTCCGCTTTGTCCCTCAGCACTACCAGGTCTTGTACAGCAATGCCG
TCGGATTTTGTTGGAATATTTTTTTGAGTGCAATCAGCCATAAGTAA back to top
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