EWM25549.1, cds5121 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25549.1 vs. NCBI_GenBank
Match: gi|585107320|gb|EWM25549.1| (Cullin repeat-like-containing domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1278.08 bits (3306), Expect = 0.000e+0 Identity = 629/629 (100.00%), Postives = 629/629 (100.00%), Query Frame = 0
Query: 1 MSSATKWTSSGADGAENCSITGNDKARNTRQPAYNRLPRKHKSRSPSSATGITDSLAEFAEQTFVPEEYAEAFFAAHPEAEAEERCAELTDLRCQTQELLRAEVASHYQLFMRSTEDIQHVEADIARLRRHVGRMQKSLKALDGAMTTTLSGAAADNVSIAFAASSKVRDGSIAIKEMEDGGQDGIGARARDVASLPESLRSWGATGATGKRGMAGEGRGGGSDGFKGGLHHQGSDPAANLSSDLEGKGPSGQPAPNSLERDDLPAWVAAAMEDLDKCIVENQRSVAVNHIVKLRALLASLSPSRASSPHSQDLQRRVTSKGKEIAGRIVRELDALAPGANLSILFDFADMAQQLRFLVALDEAETAVDFFVRNKGGVLARALHSPETSGEPLVYVAVLAERFFGLMADACESFDALFTVSVSEGRSEAITAGGTPITPPPNFEAFTSTDVENQRGGPMSTPWPSVRPPECFLRLVLWVEEEVRQFAVLLGRQLRSLRQDWLLYRLRVEGKARGKDGKLAKGIIAGSGGDGTVRVLGALTDITLQNLRQWTEDPWVLVDATAIEIEEVRPVFDLYTRTVDAMGGKVAAEEASAAAISSPPKSGSAPPVKQPPSGTSPPSGAFSRLTLKK 629
MSSATKWTSSGADGAENCSITGNDKARNTRQPAYNRLPRKHKSRSPSSATGITDSLAEFAEQTFVPEEYAEAFFAAHPEAEAEERCAELTDLRCQTQELLRAEVASHYQLFMRSTEDIQHVEADIARLRRHVGRMQKSLKALDGAMTTTLSGAAADNVSIAFAASSKVRDGSIAIKEMEDGGQDGIGARARDVASLPESLRSWGATGATGKRGMAGEGRGGGSDGFKGGLHHQGSDPAANLSSDLEGKGPSGQPAPNSLERDDLPAWVAAAMEDLDKCIVENQRSVAVNHIVKLRALLASLSPSRASSPHSQDLQRRVTSKGKEIAGRIVRELDALAPGANLSILFDFADMAQQLRFLVALDEAETAVDFFVRNKGGVLARALHSPETSGEPLVYVAVLAERFFGLMADACESFDALFTVSVSEGRSEAITAGGTPITPPPNFEAFTSTDVENQRGGPMSTPWPSVRPPECFLRLVLWVEEEVRQFAVLLGRQLRSLRQDWLLYRLRVEGKARGKDGKLAKGIIAGSGGDGTVRVLGALTDITLQNLRQWTEDPWVLVDATAIEIEEVRPVFDLYTRTVDAMGGKVAAEEASAAAISSPPKSGSAPPVKQPPSGTSPPSGAFSRLTLKK
Sbjct: 1 MSSATKWTSSGADGAENCSITGNDKARNTRQPAYNRLPRKHKSRSPSSATGITDSLAEFAEQTFVPEEYAEAFFAAHPEAEAEERCAELTDLRCQTQELLRAEVASHYQLFMRSTEDIQHVEADIARLRRHVGRMQKSLKALDGAMTTTLSGAAADNVSIAFAASSKVRDGSIAIKEMEDGGQDGIGARARDVASLPESLRSWGATGATGKRGMAGEGRGGGSDGFKGGLHHQGSDPAANLSSDLEGKGPSGQPAPNSLERDDLPAWVAAAMEDLDKCIVENQRSVAVNHIVKLRALLASLSPSRASSPHSQDLQRRVTSKGKEIAGRIVRELDALAPGANLSILFDFADMAQQLRFLVALDEAETAVDFFVRNKGGVLARALHSPETSGEPLVYVAVLAERFFGLMADACESFDALFTVSVSEGRSEAITAGGTPITPPPNFEAFTSTDVENQRGGPMSTPWPSVRPPECFLRLVLWVEEEVRQFAVLLGRQLRSLRQDWLLYRLRVEGKARGKDGKLAKGIIAGSGGDGTVRVLGALTDITLQNLRQWTEDPWVLVDATAIEIEEVRPVFDLYTRTVDAMGGKVAAEEASAAAISSPPKSGSAPPVKQPPSGTSPPSGAFSRLTLKK 629
BLAST of EWM25549.1 vs. NCBI_GenBank
Match: gi|298704915|emb|CBJ28418.1| (exocyst complex component, putative [Ectocarpus siliculosus]) HSP 1 Score: 85.1149 bits (209), Expect = 2.060e-13 Identity = 69/254 (27.17%), Postives = 121/254 (47.64%), Query Frame = 0
Query: 244 DLEGKGPSGQPAPNSLERDDLPAWVAAAMEDLDKCIVENQRSVAVNHIVKLRALLASLSPSRASSPHSQDLQRRVTSKGKEIAGRIVRELDALAPGANLSILFDFADMAQQLRFLVALDEAETAVDFFVRNKGGVLARALHSPETSGEPLVYVAVLAERFFGLMADACESFDALFTVSVSEGRSEAITAGGTPITPPPNFEAFTSTDVENQRGGPMSTPWPSVRPPECFLRLVLWVEEEVRQFAVLLGRQLRSL 497
D +G GPS LP W+ A +L++ ++E + A I ++R A+L + + + ++V + +A R++ E+ A AN ++ F + L++L E+E A FFV + ++ R+L E + +PL YV VL+E FFG + DA +F LF S +I G + ++ + V++ P F RLV+WV +++ Q+AVL+GRQ+R++
Sbjct: 143 DEDGDGPSTSRGLK------LPEWLDQAPIELEELLLERKHQEAATLIRRVRDFSANLQNATNLGRGVERIFQKVETMAAGMAERLLAEISA----ANTLTVWGFREHKSNFALLISLGESEKAAIFFVGERSAMIRRSLRLVEVTADPLSYVGVLSETFFGQVLDAVSAFLKLFCKSARIHERRSIKTGKS----TAYYQVYQG--VKDCGTAP-------------FCRLVVWVNQQIDQYAVLMGRQIRAI 367 The following BLAST results are available for this feature:
BLAST of EWM25549.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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