EWM25637.1, cds5032 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM25637.1 vs. NCBI_GenBank
Match: gi|585107465|gb|EWM25637.1| (hypothetical protein Naga_100037g11 [Nannochloropsis gaditana] >gi|585107466|gb|EWM25638.1| hypothetical protein Naga_100037g11 [Nannochloropsis gaditana]) HSP 1 Score: 1643.25 bits (4254), Expect = 0.000e+0 Identity = 786/786 (100.00%), Postives = 786/786 (100.00%), Query Frame = 0 Query: 1 MLLSRKTTAQDSALSSWWTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLASPTPSGVDCIPQVQMRTDLSLWLLSIDKLMEPKNMPATVRSLREEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLEYSNAAVHDSIATSVSFSSTLISTPQLSLSPRSMSRARIGAFLAGGEKGGKRMEKKNEEAVADSTTEYRDSQENCVRDAASGEGEMVIAAKRARHHDKTTCSGFRRIIFVGRACSESHAQALQHLPEILQPSLGQAKISSTDWFPCSGGLHRTTQEKKSFGRHHPSYDSSHGSTISDTVCSINTLTSAAGSTSLKHSMRAFERDVSKGQAPAITQASVSRTDTKRQPQQQQNVQQQEEQLYYRNLASQKHLWPPSPNGRLTRLNRPQCWVTCQRQQQHKERSVQASANQVKSPKQYGAKSEKHLTPQQQWDMAQKQHYQLQYQLSHPAKASYGPKHGHRTSRTRVHHQSLFQRRYPQPPRNVQTISCDEAEIDSASSSTSSSASLPGSRSFSCSSDSTSSSGSGYEKFRLHHSQDPAAQNLCGTGASRTFDSRVLVGVSPLRLDSEDVRQHLELRPPECYQRCLDRSRDNFNDSSTDGKEDIYLIDKTLTRAGDGQTEGWQEDERALRSEESPNAMLAELNDYFSNDWRVD 786 MLLSRKTTAQDSALSSWWTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLASPTPSGVDCIPQVQMRTDLSLWLLSIDKLMEPKNMPATVRSLREEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLEYSNAAVHDSIATSVSFSSTLISTPQLSLSPRSMSRARIGAFLAGGEKGGKRMEKKNEEAVADSTTEYRDSQENCVRDAASGEGEMVIAAKRARHHDKTTCSGFRRIIFVGRACSESHAQALQHLPEILQPSLGQAKISSTDWFPCSGGLHRTTQEKKSFGRHHPSYDSSHGSTISDTVCSINTLTSAAGSTSLKHSMRAFERDVSKGQAPAITQASVSRTDTKRQPQQQQNVQQQEEQLYYRNLASQKHLWPPSPNGRLTRLNRPQCWVTCQRQQQHKERSVQASANQVKSPKQYGAKSEKHLTPQQQWDMAQKQHYQLQYQLSHPAKASYGPKHGHRTSRTRVHHQSLFQRRYPQPPRNVQTISCDEAEIDSASSSTSSSASLPGSRSFSCSSDSTSSSGSGYEKFRLHHSQDPAAQNLCGTGASRTFDSRVLVGVSPLRLDSEDVRQHLELRPPECYQRCLDRSRDNFNDSSTDGKEDIYLIDKTLTRAGDGQTEGWQEDERALRSEESPNAMLAELNDYFSNDWRVD Sbjct: 1 MLLSRKTTAQDSALSSWWTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLASPTPSGVDCIPQVQMRTDLSLWLLSIDKLMEPKNMPATVRSLREEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLEYSNAAVHDSIATSVSFSSTLISTPQLSLSPRSMSRARIGAFLAGGEKGGKRMEKKNEEAVADSTTEYRDSQENCVRDAASGEGEMVIAAKRARHHDKTTCSGFRRIIFVGRACSESHAQALQHLPEILQPSLGQAKISSTDWFPCSGGLHRTTQEKKSFGRHHPSYDSSHGSTISDTVCSINTLTSAAGSTSLKHSMRAFERDVSKGQAPAITQASVSRTDTKRQPQQQQNVQQQEEQLYYRNLASQKHLWPPSPNGRLTRLNRPQCWVTCQRQQQHKERSVQASANQVKSPKQYGAKSEKHLTPQQQWDMAQKQHYQLQYQLSHPAKASYGPKHGHRTSRTRVHHQSLFQRRYPQPPRNVQTISCDEAEIDSASSSTSSSASLPGSRSFSCSSDSTSSSGSGYEKFRLHHSQDPAAQNLCGTGASRTFDSRVLVGVSPLRLDSEDVRQHLELRPPECYQRCLDRSRDNFNDSSTDGKEDIYLIDKTLTRAGDGQTEGWQEDERALRSEESPNAMLAELNDYFSNDWRVD 786
BLAST of EWM25637.1 vs. NCBI_GenBank
Match: gi|585112110|gb|EWM29539.1| (hypothetical protein Naga_100006g24 [Nannochloropsis gaditana]) HSP 1 Score: 182.57 bits (462), Expect = 9.924e-45 Identity = 93/245 (37.96%), Postives = 144/245 (58.78%), Query Frame = 0 Query: 33 YDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLASPTPSGVDCIPQVQMRTDLSLWLLSIDKLMEPKNMPATVRSLREEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLEYSNAAVHDSIATSVSFSSTLI 277 Y+ + A F +V A+LK G+LQH++ALAII TW+ +VD +CG NL+LR LAS + + QV +R S+ +L+E ++PA V L E A S SCGF++ G FR+WT+ FSA Y E+ N + G+LP + FG I ++ F++ +A HML D++E T SMV++T+GRD + + L+ IRY + N G + A+N+ P++Y A +S A + S S+++ Sbjct: 62 YECSSEAVLTFGRVTARLKTSGELQHERALAIIHTWDTTSRAQRVDVSCGAANLILRALASLNSTYASPVLQVPVRFGTSVACCPAGELLEGVHVPAFVAELDEGATSASCGFIYTGGEFRIWTDLNFSARYFDAEEANVYHIQAGVLPCYLFGCIIHRTYQEQFFDRLAVHMLKDNTEEKTMSMVAQTLGRDQVVTQNLLRIRYVVRNSGHYACLALNVLPIDYPGAMNGESPAATPSALSSVM 306
BLAST of EWM25637.1 vs. NCBI_GenBank
Match: gi|553178084|ref|XP_005852521.1| (hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526] >gi|422296012|gb|EKU23311.1| hypothetical protein NGA_0534002 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 160.229 bits (404), Expect = 3.786e-40 Identity = 84/249 (33.73%), Postives = 134/249 (53.82%), Query Frame = 0 Query: 18 WTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLASPTPSGVDCIPQVQMRTDLSLW-LLSIDKLMEPKNMPATVRSL----REEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLEYSNAA 261 W L GEL GL++ HC LA+ F + +L+ G+LQH K I+R W+ C K D TCG L R+LASP P GV Q ++ ++S++ I++ + P +MP V L R+E ++ CG+ + +G F++WT+ F+ +Y + + N +LP + +G +F P R FYE + E++L E +MV+E + DG LV R+ ++N GQ FAM+ PL ++A+ Sbjct: 12 WALVGELQSAPGLDRLSHCRLASTTFTYIGYRLRKAGRLQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRILASPIPHGVPICYQASLQENISMYDDRPIEEKLSPHHMPEYVLRLCMESRKEGAAV-CGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPLANASAS 259
BLAST of EWM25637.1 vs. NCBI_GenBank
Match: gi|585112121|gb|EWM29550.1| (hypothetical protein Naga_100006g18 [Nannochloropsis gaditana] >gi|585112122|gb|EWM29551.1| hypothetical protein Naga_100006g18 [Nannochloropsis gaditana]) HSP 1 Score: 165.236 bits (417), Expect = 9.937e-39 Identity = 85/251 (33.86%), Postives = 135/251 (53.78%), Query Frame = 0 Query: 18 WTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLASPTPSGVDCIPQVQMRTDLSLW-LLSIDKLMEPKNMPATVRSL----REEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNLRPLEYSNAAVH 263 W L GEL GL++ HC LAA F + +L+ G+LQH K I+R W+ C K D TCG L R+LASP P GV Q ++ ++S++ I++ + P +MP V L R+E ++ CG+ + +G F++WT+ F+ +Y + + N +LP + +G +F P R FYE + E++L E +MV+E + DG LV R+ ++N GQ FAM+ PL ++A+ + Sbjct: 12 WALVGELQSAPGLDRLSHCRLAATTFTYIGYRLRKAGRLQHYKLQGILRAWDVYCYRTKTDVTCGALLGLYRILASPIPHGVPICYQASLQENISMYDDRPIEEKLSPHHMPEYVLRLCMESRKEGAAV-CGYTYVNGHFQLWTDTLFAEKYYTATEANARFTQFAVLPCYLYGCLFHPRDRPCFYELLVEYLLTKGDERRRLAMVAEVLRNDGTSEACLVQARHTVMNDGQYLAFAMSFLPLANASASSY 261
BLAST of EWM25637.1 vs. NCBI_GenBank
Match: gi|585110393|gb|EWM28051.1| (fungal specific transcription [Nannochloropsis gaditana]) HSP 1 Score: 160.614 bits (405), Expect = 4.863e-37 Identity = 92/289 (31.83%), Postives = 148/289 (51.21%), Query Frame = 0 Query: 18 WTLAGELGVPSGLEQYDHCALAARKFAQVAAQLKAVGKLQHDKALAIIRTWERCCELNKVDATCGVTNLLLRVLA-------------SPTPSGVDCIPQVQMRTDLSLWLLSIDK--LMEPKNMPATVRSLREEAVSMSCGFVHAHGTFRVWTNDRFSAEYMSTEKVNNWLADTGLLPFFCFGTIFSPASRDNFYEYVAEHMLADSSEGHTTSMVSETVGRDGRLMKRLVTIRYEILNGGQNSYFAMNL-----RPLEYSNAAVH-DSIATSVSFSSTLISTPQLSLS 285 W L L P GL YDHC A F + ++ G+LQH K LAI+RTW+ + +D +CG + ++RVLA S G + V+ DL L++D+ ++ +MP+ V SL++ S G+V+ G +R+WT RF+ +M+ VN+ T +LP F FG+ +P R NFY + E+ML + EG ++ ++ + DG + K LV RY +LN GQ S FA++ P+ + +H SIA++ + S + P +S++ Sbjct: 584 WALMAVLQPPPGLRYYDHCKTTAPLFGETVLRMIDTGRLQHLKTLAILRTWDFYNHKHGIDISCGASAAIVRVLALRKSAAYTSGSGESSESVGTNAEQPVEWNDDL----LAMDRQDALDQAHMPSYVSSLQDGGDSAVGGYVYCSGQYRLWTGKRFADRFMTASTVNSLFDQTKILPCFLFGSFLAPNDRPNFYRSLIEYMLGPTREGREMTVTADVMELDGHVFKALVRARYMVLNEGQYSCFALSFLQIPGLPVRFVPPTIHPSSIASAAADQSRSDACPDVSMA 868 The following BLAST results are available for this feature:
BLAST of EWM25637.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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