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Properties
| Property Name | Value |
|---|
| Product | manganese lipoxygenase |
| Orig transcript id | gnl|cribi|Naga_100546g4.2628.mrna |
| Orig protein id | gnl|cribi|Naga_100546g4.2628 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:954877..957504 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5026 ID=rna5026|Name=rna5026|organism=Nannochloropsis gaditana|type=mRNA|length=282bp
ATGATACGAGTATATTTTAAGATGAATGCAAAGGACACCCCGGAGACACG
TGCCGCGGAAGACGGGCTTCAGATAAGCTGCGTGCCAGCATTTAGTCGGT
TGAAAAGATCGCTACTATATCAGGGTGTAACCACTATCTGCACGCTTATG
CAAGGGAATTTTCAGCCAGCAATTTACGGTTCTCCGTGTCGTTGTTGTCG
TCGATGTCCGCTGCAGAGATTGACGAACTGCCCCTGCTTTGAAGAAAATC
TACCACAAAGAAATATCTCTACCTCTGTCTAG back to topprotein sequence of rna5026 >rna5026-protein ID=rna5026-protein|Name=rna5026|organism=Nannochloropsis gaditana|type=polypeptide|length=660bp
MIHQRRVMYLAVPLWIVLFGALTATDASRSNIVTGHTHRKGQLSGNRKLV
RLADEEKKGFLSIPQDDPDPAGRALRLSYRAPFWEFVPYASKNPLLVNLT
MAAPGGILGNQTRLSQGAFVLGQINTSVEIGLQTIAEPISTACTDISSTG
MCFETLDSYLPLYQSLDPEYQPAAYKFYDSDKAFARERLTASPAFLTLVK
NVAEIPFTQADVTGYNTITGSESLSSLIAQGRVFIVDYYPLYQRGVLEAS
PNSFLEAPTAIFFLDSPTKNMKWNNLKKKDMVLMPLAIKYNVQQTYVVSP
QDPHPDWFLAKAVFNCLDRDVLFVYHFVLHTAMNNIVIAAEKTLASEHPL
YMPIQHAAKNDFGIVLSGVAGLLNPDAAFNEFLSLSGSSVAGLSFPYFME
QFDWRLTNLWEDLKARGVSDVPGYLYRDDAGAIFKALRTYSKKYLAGSYR
KRGSVRGDPELRDFLAALTNSSNSLAFLQGFPTSAEVRNLKDVSELLAQI
LWIGGVLHHALNSYTLLEYGLVYPSHPGKILAPLPASTGTLTDDTMLQLY
ISGAMSGNQASAAKTSASQISTMDIGTPLEFFLGTQGTGFAFFPLLQKTG
RLTNIYLSDTEDKRTAKAAIALRQRLRAISKRIYKREAAVTDVPKYTLLD
PAILPFNLFI back to topmRNA from alignment at CM002464.1:954877..957504+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna5026 ID=rna5026|Name=rna5026|organism=Nannochloropsis gaditana|type=mRNA|length=2628bp|location=Sequence derived from alignment at CM002464.1:954877..957504+ (Nannochloropsis gaditana)
GACCGTACAAAGACTCTGCTGACGTAGTGTATTGACCAGCTTGCTTCCCC
TGTGACCCCCTTACTCAAAGTCCCAAAAGGTACACCTTGTCGCAGATCCA
ATACGATAAGCATAGATTATCTGTGTCTCACTCTTCCGTGTTGCAACGTG
TTGTGCGCTGCGAACCTTTGTAGACTCGTTAATTAAAATGTATACGGTTC
TCGTCAATGATTAGCCAAACACATGGGACATGTATAGCGGTCTCTCGACT
GTATCGTCTTGGAAAAGTCAGTTATCTCATATAGATAAGAAATAAAAAAT
CTCTACAAACAGGCATCTGTAAACTCTTACATCCCCTGATGATTCATCAA
CGCCGAGTCATGTACCTGGCAGTACCATTGTGGATCGTGCTCTTCGGGGC
TCTCACCGCGACAGATGCCTCGCGCAGCAACATTGTCACCGGCCACACAC
ACAGGAAAGGCCAGCTATCAGGCAATCGAAAGCTTGTACGACTCGCGGat
gaagagaaaaagggatTCCTATCAATTCCTCAGGATGACCCTGACCCCGC
GGGCCGCGCTCTACGCTTGAGCTATAGAGCGCCTTTCTGGGAGTTTGTAC
CTTATGCTTCCAAAAATCCATTACTGGTTAATTTGACCATGGCGGCACCA
GGCGGCATCCTGGGGAACCAGACGCGTCTTTCGCAAGGTGCTTTCGTTTT
GGGGCAGATTAACACCTCTGTTGAAATAGGCTTACAGACTATAGCGGAAC
CCATTTCAACCGCATGCACGGACATTAGTTCGACGGGCATGTGCTTTGAA
ACACTTGACAGCTATCTGCCTCTCTACCAGTCCCTGGACCCTGAGTACCA
GCCTGCCGCCTACAAGTTCTATGATTCTGACAAGGCATTCGCCCGCGAGC
GTCTCACCGCCTCGCCGGCATTTCTCACGCTCGTGAAAAACGTGGCCGAA
ATTCCTTTCACGCAAGCGGATGTGACGGGCTACAACACCATTACAGGGAG
TGAGTCTTTATCCAGCTTAATCGCCCAAGGTCGTGTCTTTATTGTGGATT
ACTACCCACTCTACCAGAGGGGAGTTCTGGAGGCTTCGCCGAATTCATTC
TTGGAAGCACCGACGGCCATCTTCTTTTTGGACAGTCCGACTAAAAATAT
GAAATGGAACAatttgaagaagaaggataTGGTACTTATGCCACTGGCGA
TCAAGTACAATGTGCAGCAGACTTACGTTGTGTCACCCCAAGACCCTCAT
CCTGATTGGTTTTTGGCCAAGGCGGTTTTCAACTGCTTGGATCGAGATGT
GTTGTTCGTGTACCACTTTGTACTGCATACTGCCATGAATAATATTGTAA
TCGCAGCGGAGAAGACACTGGCCAGCGAGCATCCCCTCTACATGCCAATT
CAGCATGCGGCAAAAAATGACTTTGGAATCGTGCTTTCCGGTGTAGCAGG
ACTCTTGAATCCCGACGCTGCCTTCAATGAGTTCCTTTCTCTTAGTGGAA
GCTCTGTCGCGGgactttccttcccataTTTCATGGAACAATTTGACTGG
CGCCTCACAAACCTGTGGGAGGATCTCAAAGCACGCGGAGTATCGGATGT
GCCAGGTTATTTGTATCGTGATGACGCCGGAGCAATTTTTAAAGCTCTAC
GCACCTATTCAAAAAAGTATCTTGCAGGTTCATACAGGAAGCGCGGATCC
GTGCGAGGCGATCCAGAGCTCCGAGACTTCCTTGCTGCACTGACCAACTC
ATCGAACTCACTTGCATTCCTGCAGGGTTTCCCAACCTCAGCCGAAGTGC
GAAACCTAAAGGATGTCAGTGAATTGCTCGCACAAATTTTGTGGATCGGT
GGCGTGTTGCACCACGCGCTCAATTCGTATACATTGTTGGAATATGGGTT
GGTCTATCCTAGTCACCCGGGGAAAATTCtggcccctctcccggcCAGCA
CGGGCACGCTCACGGATGACACAATGTTGCAATTGTACATCTCGGGCGCT
ATGTCTGGCAACCAggcctccgccgccaaaACCTCTGCGTCGCAAATTTC
GACGATGGATATTGGTACCCCCCTTGAATTTTTCCTGGGCACGCAAGGGA
CTGGAtttgctttcttcccgtTGCTGCAAAAGACCGGTCGGCTCACAAAC
ATCTACCTGTCCGACACTGAGGACAAGCGCACAGCCAAAGCGGCTATTGC
CCTTCGTCAGCGGCTGCGGGCTATCAGTAAGCGCATTTACAAGCGCGAGG
CCGCCGTAACTGATGTGCCCAAGTATACGCTCCTGGACCCGGCGATCCTT
CCGTTCAATCTCTTTATTTAAACTTAGATATCACGGCCCTCGTCCATGCT
ATTAGGAAGCCAGATTAGGCCGAGTAGGCTTTAAAAGGCAGGATTTGGAC
ATTTGTCACAGGTCACAGCCATATTGATCGGGGCACTTAAAAAAATCGTC
TTCCGTGCGCACCGTAAGATATCAAAACATTTAAGTGTAAGTGAAACTTG
TCCATAATCGATTAAGTCGTTGGAGCGAGTATAGGAATCACTCATATAAA
TGGAATTTACTGCCCTAGATTGTTTCGATTCTATTAGGAAGTAAAAGAAG
AAAGTCATAGCCTGCACTGGGAAAAATA back to topCoding sequence (CDS) from alignment at CM002464.1:954877..957504+ >rna5026 ID=rna5026|Name=rna5026|organism=Nannochloropsis gaditana|type=CDS|length=1983bp|location=Sequence derived from alignment at CM002464.1:954877..957504+ (Nannochloropsis gaditana)
ATGATTCATCAACGCCGAGTCATGTACCTGGCAGTACCATTGTGGATCGT
GCTCTTCGGGGCTCTCACCGCGACAGATGCCTCGCGCAGCAACATTGTCA
CCGGCCACACACACAGGAAAGGCCAGCTATCAGGCAATCGAAAGCTTGTA
CGACTCGCGGatgaagagaaaaagggatTCCTATCAATTCCTCAGGATGA
CCCTGACCCCGCGGGCCGCGCTCTACGCTTGAGCTATAGAGCGCCTTTCT
GGGAGTTTGTACCTTATGCTTCCAAAAATCCATTACTGGTTAATTTGACC
ATGGCGGCACCAGGCGGCATCCTGGGGAACCAGACGCGTCTTTCGCAAGG
TGCTTTCGTTTTGGGGCAGATTAACACCTCTGTTGAAATAGGCTTACAGA
CTATAGCGGAACCCATTTCAACCGCATGCACGGACATTAGTTCGACGGGC
ATGTGCTTTGAAACACTTGACAGCTATCTGCCTCTCTACCAGTCCCTGGA
CCCTGAGTACCAGCCTGCCGCCTACAAGTTCTATGATTCTGACAAGGCAT
TCGCCCGCGAGCGTCTCACCGCCTCGCCGGCATTTCTCACGCTCGTGAAA
AACGTGGCCGAAATTCCTTTCACGCAAGCGGATGTGACGGGCTACAACAC
CATTACAGGGAGTGAGTCTTTATCCAGCTTAATCGCCCAAGGTCGTGTCT
TTATTGTGGATTACTACCCACTCTACCAGAGGGGAGTTCTGGAGGCTTCG
CCGAATTCATTCTTGGAAGCACCGACGGCCATCTTCTTTTTGGACAGTCC
GACTAAAAATATGAAATGGAACAatttgaagaagaaggataTGGTACTTA
TGCCACTGGCGATCAAGTACAATGTGCAGCAGACTTACGTTGTGTCACCC
CAAGACCCTCATCCTGATTGGTTTTTGGCCAAGGCGGTTTTCAACTGCTT
GGATCGAGATGTGTTGTTCGTGTACCACTTTGTACTGCATACTGCCATGA
ATAATATTGTAATCGCAGCGGAGAAGACACTGGCCAGCGAGCATCCCCTC
TACATGCCAATTCAGCATGCGGCAAAAAATGACTTTGGAATCGTGCTTTC
CGGTGTAGCAGGACTCTTGAATCCCGACGCTGCCTTCAATGAGTTCCTTT
CTCTTAGTGGAAGCTCTGTCGCGGgactttccttcccataTTTCATGGAA
CAATTTGACTGGCGCCTCACAAACCTGTGGGAGGATCTCAAAGCACGCGG
AGTATCGGATGTGCCAGGTTATTTGTATCGTGATGACGCCGGAGCAATTT
TTAAAGCTCTACGCACCTATTCAAAAAAGTATCTTGCAGGTTCATACAGG
AAGCGCGGATCCGTGCGAGGCGATCCAGAGCTCCGAGACTTCCTTGCTGC
ACTGACCAACTCATCGAACTCACTTGCATTCCTGCAGGGTTTCCCAACCT
CAGCCGAAGTGCGAAACCTAAAGGATGTCAGTGAATTGCTCGCACAAATT
TTGTGGATCGGTGGCGTGTTGCACCACGCGCTCAATTCGTATACATTGTT
GGAATATGGGTTGGTCTATCCTAGTCACCCGGGGAAAATTCtggcccctc
tcccggcCAGCACGGGCACGCTCACGGATGACACAATGTTGCAATTGTAC
ATCTCGGGCGCTATGTCTGGCAACCAggcctccgccgccaaaACCTCTGC
GTCGCAAATTTCGACGATGGATATTGGTACCCCCCTTGAATTTTTCCTGG
GCACGCAAGGGACTGGAtttgctttcttcccgtTGCTGCAAAAGACCGGT
CGGCTCACAAACATCTACCTGTCCGACACTGAGGACAAGCGCACAGCCAA
AGCGGCTATTGCCCTTCGTCAGCGGCTGCGGGCTATCAGTAAGCGCATTT
ACAAGCGCGAGGCCGCCGTAACTGATGTGCCCAAGTATACGCTCCTGGAC
CCGGCGATCCTTCCGTTCAATCTCTTTATTTAA back to top
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