|
|
Properties
| Property Name | Value |
|---|
| Product | major facilitator superfamily |
| Orig transcript id | gnl|cribi|Naga_100387g3.61.mrna |
| Orig protein id | gnl|cribi|Naga_100387g3.61 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:921191..924272 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna5008 ID=rna5008|Name=rna5008|organism=Nannochloropsis gaditana|type=mRNA|length=2086bp
CATCCCTCAGCACTCTCCACCCGGCCGCCGTCTCCTCTGAGCGCCCCGAA
CGCAAGGCCCAGGAGGAGGAGGAAGCCGTCAATTTCCAACAAGAGATCGC
AGACTTGGCCATCTTTGTCTATCGCCACGGCGAGGCCCGCCAGAAAATGG
TGGCCATGCTCTGCCACATTTCTCACCACGCATTGCACGACCGCTTCCAC
GAGGCGCGGGACCTGTATTTAATGAGCCACATCGCCCGGGACATCAACGA
CTTGGAGGACGAGATGAGGATACTGTTCAACCGGACCATGGTGCACCTGG
GCCTCTGCGCTTTCCGCCAAGGGCTCATTCAGGAAGCTCACCAGTGCCTC
TCGGAAATTTCTTCCAAGCGCCCCAAGGAGCTTTTGGCTCAAGGCATCTC
CCGCCCTTTCCACCAGCGTGACTTGGACCCAGAGGCCGAGAAGGAGGAGC
GACGGCGGCAACTTCCCTTCCACATGCACATCAACATCGACCTGTTGGAG
CTCTGTCATTTGACCAGCGCCATGCTCCTCGAGGTGCCAAATTTAGCGAC
ATTAGAAGGAAGGGTGGATCGCAAGCGAGTCGTTTCGGGATTTTTCCGCA
AGATTCTTCAACAGTACGAGACGCAGACGTTCGCAGGGCCGCCCGAGAAC
ATCCGTGACCATGTCTTGGCCGCAGCCCGGGCTCTGGGCTCGGGGGACTG
GCGAACGTGCCGGGACTTGATCTTCAAGCCCGAGGTCTGGCATCGGATTC
CCGGCCCCGGGGCTGTGGAGCGCGTGCAGGCCATGCTCCTGGACAAGATC
AAGATGGAGGGGCTCAGGACGTACCTCTTCACCTTCTCCCCGTACTACGA
TTCCTTGTCCCTCCCCCAGCTCTGCGAGATGTTCGAGATGGAGAGGGGAA
CCGCTCACAGCATCATCAGCAAGATGATGATCTACGGCGAGCTCCATGCC
TCCTGGGATCAACCCACAGAGACAGTCGTGCTCCAGCGTGTGGAAGCCAG
TCACCTTCAGGTCTTGGCCTTGCAGTACGCGGACCGGTGCGTTTCCTCCT
TCCATCCATTCCTCCCTCCCTCCCTCCCTCCCTCCCTCTATCTCCTCTTC
TTCTCCCTTCCCTTTCTCCTACCCCTCTTTCCGGAGCCAGACTTCCTCCT
CGTTTCCTTCTATTCCGCCGATTCCTCTCACCTTGAACCCGCTGTGTATA
CTTCCCTCCCTCACTCCCTCCCTCCCTCCCTCACTCCCTCCCTCTCTCCC
TCCTTCCTTCCCTCTCTCAGGCTGGAGCGCTTGGTGGGTGCCAACGAGGG
CATGGTCCAGGTCAAAGCCGGCCGCGGGGATGGAGAGAAAGCCGGGCACG
ATGGGGAGCACCATCGAGGAGGAGGACGGGGGGGGGGGCGGGGAGGAGGA
GGGGATGAAGGTGGCTGGAATCAGGCAGGGAGAGGGCGAGGAAGGGGGCG
AGGAAGGGGTCGAGGGAGGGGGGGAGGGGGCGGGTACCGGGGAGGAGGGT
ATGGTGGCGGTGGTTTCAACAGCTTTAGATCCGCTGGTTTTTAGAAAATG
GGTAAGGCAAGTTTGGGATGGTTGGAGGAGACGCTCTGGATGGAGGAAGG
GAGGTAGGGAGGGAGGAAGCGAGGGAGGGAGGGGGGGAGAGATTTAGGAG
GGATGGTGTAAGGGCAGAGTGGGAGGACTTGAGAAATAGTGGGTGGACTG
AATCCTATCACGAAATGTTTGATTATCTTAGAGGGTTGCCGCTCTATCTC
CAAAGGCGCTCCATCGCGCCTTTCCCCTCTCCCTTCCTCCCTCCGTCTCT
CCGTCCCTCCTTCCCTTTCTTGGCGGTGACGGCCCGCCAGCAGCGCCAGG
AACGCGCAGAGTCGAAGGGCTGGGGTAGGAAAGAAGGATAAGATAAAGAC
AAAGATGCCTATTCGATTGCCAGACGGCAGCAGCACGGACGAAAATACAC
GAGGGGGGCCGAAAGCGATGGTGAGGATCGATCGTAAGACAGCACGTGGT
CATAAGAGGAGCGGGATAACGTCGCAGGGTCTCAGGGGAAATGTTGACAA
GGAATGAATCGAATAATTCCAAACGAGAGAGGAACG back to topprotein sequence of rna5008 >rna5008-protein ID=rna5008-protein|Name=rna5008|organism=Nannochloropsis gaditana|type=polypeptide|length=821bp
MPWDQNKEKREDTAGDDGKKTATAPKDKGQGSSKRKRGRRGGRGQGRGPR
LSSAQAFAANEAGNGRPAPLLSSASPSGTDRRFKESMAVQALAPSPPRGL
DESSVLLPTERTRPRDKEGIRKHPKEGWIQRARQQQEKRGGEHAREEEEG
KEGLPPQYRERGTPTSTVLVGEPSLMEEGRLPLRAGTDAAGGGGGGRGEG
GGGRGGGGGGRGSGPGGWRGQKGRFREQGGLVEHVAIKGGKGLKPGGMDA
AGVAEGRAEGTRGERGPGCTSGYGTAMPSLSVPPRVYRPSVSSSSSASDI
SPLTSMKAEALSGPRQLVLLLLISVLPFGGHFVKNCLTSLEVYMVNDARL
HLSETRYGLLLSMSSLPNFFIPFLGGVFLDKRGHRFATLLFLFLVLLGQC
LFTVAIQLGSYPWALVGRVVMGLGEGSVVVAQRAVICHVFKAQAQVTFAV
GVSVAMACLSKTLSRATVVPAADLLGGYVGGLWYTVVVCLLSTLAGVLFL
VISDESKEDPFERRRSRSQAGGGSGWGANGLRDAYMGRSVDPSCGGSGGG
AGGGAGAGRADLSPGSLVVHPGMGEGGLLAPSSSLSAVSHTPTYQSMLAL
RRTAVSLSASFWALAFLHSVYINVFHIFLNFSSHYFTVVFGRDAKSAAFL
TSSASVLVIFLGPLVGYIMDKMGGQLYVCTASAALVLYAYISLSFDPALD
PLYDMVLLSIGESFIPILVMALIPFTVPRRAYGTAYGVMEVSGALCSFAG
NVLIGYLIDQGRREGSEYTNEYEVPMLALTGLAGLGLLAFLGLTFFEFCC
GHKGLNTRTAIDYESLAGLDE back to topmRNA from alignment at CM002464.1:921191..924272- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna5008 ID=rna5008|Name=rna5008|organism=Nannochloropsis gaditana|type=mRNA|length=3082bp|location=Sequence derived from alignment at CM002464.1:921191..924272- (Nannochloropsis gaditana)
AATGCCATGTTCGTGCCCGACTCACTGATGTGTGCCATGCACGCTCCTCT
ACATAGGGTGATAAGCAGCACGGGGCTGGCATCCGACGGGCGGAGGGAAA
GGGGGGGGGCACGCGCCTCGCTTGGTTATTTTCCATACGTGTCCAGTCCG
TGACAAGCGGTGGGATGCCGTGGGACCAGAATAAGGAGAAAAGGGAGGAC
ACTGCCGGAGACGATGGGAAAAAGACGGCCACGGCCCCCAAGGACAAAGG
ACAGGGGAGCAGCAAGCGGAAACGGGGGCGAAGGGGAGGGAGAGGGCAGG
GACGGGGGCCACGATTGTCATCTGCGCAAGCATTTGCAGCAAACGAGGCG
GGGAATGGAAGACCAGCGCCCTTGCTTTCCTCCGCTTCACCAAGCGGGAC
GGACCGCCGTTTCAAAGAGAGCATGGCTGTACAAGCCCTGGCCCCATCCC
CTCCTAGGGGCCTTGACGAGTCCTCCGTTTTACTACCCACAGAAAGGACA
CGCCCGCGCGACAAGGAAGGAATCAGGAAGCATCCCAAGGAGGGATGGAT
ACAACGAGCGCGGCAGCAGCAGGAGAAACGGGGAGGAGAGCATGCGCGGG
AGGAGGAGGAGGGGAAAGAAGGGTTGCCACCACAATACAGGGAGAGGGGT
ACCCCCACCTCCACCGTGCTCGTCGGCGAGCCTTCCCTCATGGAGGAAGG
TCGCCTGCCTCTCAGAGCTGGGACGGATGCGGCCGGAGGGGGAGGAGGAG
GAAGGGGGGAAGGAGGGGGAGGAAGGGGAGGAGGAGGAGGAGGAAGAGGG
AGCGGGCCGGGAGGATGGAGGGGCCAGAAGGGAAGATTCAGGGAGCAGGG
AGGGCTTGTGGAGCATGTGGCAATCAAGGGAGGTAAAGGCCTTAAACCCG
GCGGGATGGATGCTGCAGGCGTGGCTGAAGGCAGGGCGGAAGGTACCAGG
GGAGAGCGAGGTCCCGGCTGTACCTCCGGGTATGGGACTGCGATGCCTTC
CCTCTCCGTCCCTCCCCGTGTGTACCGTCCCTCGGTCTCCTCCTCCTCGT
CAGCCTCGGACATCTCCCCCCTGACCTCCATGAAGGCGGAGGCGCTGAGT
GGGCCCCGGCAGTTGGTCCTCCTCCTCTTGATCTCCGTCCTTCCCTTTGG
CGGTCACTTCGTGAAGAATTGTTTGACGTCTTTGGAAGTCTACATGGTGA
ACGACGCCCGCCTCCACCTCAGCGAAACCCGGTATGGCCTCTTGCTCTCC
ATGTCCTCCTTGCCCAATTTCTTCATTCCTTTCCTGGGCGGGGTCTTCCT
CGACAAGCGGGGTCACCGGTTCGCCACCCTCCTCTTCCTCTTCCTCGTCC
TCCTCGGCCAATGCCTCTTCACCGTCGCCATCCAACTCGGCTCCTACCCT
TGGGCCCTGGTGGGACGGGTGGTGATGGGCTTGGGCGAAGGGTCCGTGGT
GGTGGCGCAACGGGCCGTGATTTGCCACGTCTTCAAGGCCCAGGCACAGG
TCACTTTCGCCGTCGGCGTCTCGGTCGCCATGGCCTGCCTGAGCAAGACC
CTCTCACGCGCCACCGTCGTCCCCGCCGCGGACCTGCTGGGCGGCTACGT
GGGCGGCCTTTGGTACACGGTGGTCGTCTGCCTCCTCTCCACCTTGGCCG
GTGTCCTCTTCCTCGTCATCTCGGACGAGTCCAAGGAGGACCCCTTCGAA
CGCCGTCGGAGCAGGAGTCAGGCAGGGGGAGGCTCTGGGTGGGGTGCGAA
CGGCCTGCGGGATGCCTACATGGGCCGGTCCGTGGACCCAAGCTGTGGAG
GTAGCGGGGGAGGCGCCGGGGGAGGCGCCGGGGCAGGGAGGGCCGACCTG
TCTCCGGGGTCCTTGGTGGTACATCCGGGTATGGGGGAAGGGGGTCTCCT
CGCTCCCTCCTCCTCCCTGTCGGCCGTATCGCACACCCCCACCTACCAAT
CCATGCTCGCGCTGCGCCGGACCGCTGTATCCCTCTCCGCTTCCTTCTGG
GCCCTGGCTTTCCTCCACTCCGTCTACATCAACGTCTTCCATATCTTCTT
GAACTTCTCGTCCCATTACTTCACGGTGGTTTTCGGGCGGGACGCCAAAT
CAGCGGCTTTCCTCACGTCCTCCGCCTCCGTCCTCGTCATTTTCTTGGGC
CCCTTGGTCGGTTACATCATGGACAAGATGGGGGGACAGCTCTACGTGTG
CACCGCGTCGGCCGCCCTCGTTCTCTATGCCTACATCTCCCTTTCCTTTG
ATCCTGCCCTCGACCCGCTTTACGATATGGTCCTCCTCTCCATCGGCGAG
TCCTTCATCCCCATCCTGGTCATGGCCCTGATCCCTTTCACGGTCCCCCG
CCGGGCGTACGGGACGGCCTACGGCGTCATGGAGGTCTCGGGTGCGCTCT
GTTCCTTTGCAGGTAACGTCCTGATCGGGTATTTGATCGATCAGGGCCGG
CGGGAGGGGAGTGAGTACACGAACGAGTACGAAGTGCCCATGCTCGCGTT
GACGGGACTGGCCGGCCTGGGCTTGCTGGCGTTCCTGGGGCTCACGTTCT
TTGAATTTTGCTGTGGGCACAAGGGATTGAACACGCGCACGGCCATTGAC
TACGAGAGTCTGGCAGGCTTGGATGAGTAGTGGGGTCGAGGGCGGGGGGG
GGGGCAAGAGCCGTCGGGATGTATGGCCTTGGGACTTGTTGGAATGGAGG
AGGTTTTCTTGTCCCCTTGTCAGTTATTGGGGGTCAGAAGGGATACATGG
TGTCGTTATCGCGGGCGTGGGGATGAAACGACGATTGACTGATGTGGTTT
CCCGACTGGTAGAGTGGGAGGGCAGGGGGTTCGCTCCCGTTCTATCTGGC
ACGAGGGAGAGAGCGTAGGATTATTCATGTGACCATTTGTATGAGTAGAA
CTGTCCGCGAGCGAAATGAAGATGTGGAGGAGGCAGGAGTGCCAAAAACG
TACAAAAGATAACGTACGAAAAATCTCGGGCAATTTTAGCCAAGGCACCC
TCCTCACATCGAACAAAAATAGTTTGAGTACGTAGGTAGCTAAGTCTTAA
AGAAGCATAACGAATCATAGGTTACACTGGCT back to topCoding sequence (CDS) from alignment at CM002464.1:921191..924272- >rna5008 ID=rna5008|Name=rna5008|organism=Nannochloropsis gaditana|type=CDS|length=2466bp|location=Sequence derived from alignment at CM002464.1:921191..924272- (Nannochloropsis gaditana)
ATGCCGTGGGACCAGAATAAGGAGAAAAGGGAGGACACTGCCGGAGACGA
TGGGAAAAAGACGGCCACGGCCCCCAAGGACAAAGGACAGGGGAGCAGCA
AGCGGAAACGGGGGCGAAGGGGAGGGAGAGGGCAGGGACGGGGGCCACGA
TTGTCATCTGCGCAAGCATTTGCAGCAAACGAGGCGGGGAATGGAAGACC
AGCGCCCTTGCTTTCCTCCGCTTCACCAAGCGGGACGGACCGCCGTTTCA
AAGAGAGCATGGCTGTACAAGCCCTGGCCCCATCCCCTCCTAGGGGCCTT
GACGAGTCCTCCGTTTTACTACCCACAGAAAGGACACGCCCGCGCGACAA
GGAAGGAATCAGGAAGCATCCCAAGGAGGGATGGATACAACGAGCGCGGC
AGCAGCAGGAGAAACGGGGAGGAGAGCATGCGCGGGAGGAGGAGGAGGGG
AAAGAAGGGTTGCCACCACAATACAGGGAGAGGGGTACCCCCACCTCCAC
CGTGCTCGTCGGCGAGCCTTCCCTCATGGAGGAAGGTCGCCTGCCTCTCA
GAGCTGGGACGGATGCGGCCGGAGGGGGAGGAGGAGGAAGGGGGGAAGGA
GGGGGAGGAAGGGGAGGAGGAGGAGGAGGAAGAGGGAGCGGGCCGGGAGG
ATGGAGGGGCCAGAAGGGAAGATTCAGGGAGCAGGGAGGGCTTGTGGAGC
ATGTGGCAATCAAGGGAGGTAAAGGCCTTAAACCCGGCGGGATGGATGCT
GCAGGCGTGGCTGAAGGCAGGGCGGAAGGTACCAGGGGAGAGCGAGGTCC
CGGCTGTACCTCCGGGTATGGGACTGCGATGCCTTCCCTCTCCGTCCCTC
CCCGTGTGTACCGTCCCTCGGTCTCCTCCTCCTCGTCAGCCTCGGACATC
TCCCCCCTGACCTCCATGAAGGCGGAGGCGCTGAGTGGGCCCCGGCAGTT
GGTCCTCCTCCTCTTGATCTCCGTCCTTCCCTTTGGCGGTCACTTCGTGA
AGAATTGTTTGACGTCTTTGGAAGTCTACATGGTGAACGACGCCCGCCTC
CACCTCAGCGAAACCCGGTATGGCCTCTTGCTCTCCATGTCCTCCTTGCC
CAATTTCTTCATTCCTTTCCTGGGCGGGGTCTTCCTCGACAAGCGGGGTC
ACCGGTTCGCCACCCTCCTCTTCCTCTTCCTCGTCCTCCTCGGCCAATGC
CTCTTCACCGTCGCCATCCAACTCGGCTCCTACCCTTGGGCCCTGGTGGG
ACGGGTGGTGATGGGCTTGGGCGAAGGGTCCGTGGTGGTGGCGCAACGGG
CCGTGATTTGCCACGTCTTCAAGGCCCAGGCACAGGTCACTTTCGCCGTC
GGCGTCTCGGTCGCCATGGCCTGCCTGAGCAAGACCCTCTCACGCGCCAC
CGTCGTCCCCGCCGCGGACCTGCTGGGCGGCTACGTGGGCGGCCTTTGGT
ACACGGTGGTCGTCTGCCTCCTCTCCACCTTGGCCGGTGTCCTCTTCCTC
GTCATCTCGGACGAGTCCAAGGAGGACCCCTTCGAACGCCGTCGGAGCAG
GAGTCAGGCAGGGGGAGGCTCTGGGTGGGGTGCGAACGGCCTGCGGGATG
CCTACATGGGCCGGTCCGTGGACCCAAGCTGTGGAGGTAGCGGGGGAGGC
GCCGGGGGAGGCGCCGGGGCAGGGAGGGCCGACCTGTCTCCGGGGTCCTT
GGTGGTACATCCGGGTATGGGGGAAGGGGGTCTCCTCGCTCCCTCCTCCT
CCCTGTCGGCCGTATCGCACACCCCCACCTACCAATCCATGCTCGCGCTG
CGCCGGACCGCTGTATCCCTCTCCGCTTCCTTCTGGGCCCTGGCTTTCCT
CCACTCCGTCTACATCAACGTCTTCCATATCTTCTTGAACTTCTCGTCCC
ATTACTTCACGGTGGTTTTCGGGCGGGACGCCAAATCAGCGGCTTTCCTC
ACGTCCTCCGCCTCCGTCCTCGTCATTTTCTTGGGCCCCTTGGTCGGTTA
CATCATGGACAAGATGGGGGGACAGCTCTACGTGTGCACCGCGTCGGCCG
CCCTCGTTCTCTATGCCTACATCTCCCTTTCCTTTGATCCTGCCCTCGAC
CCGCTTTACGATATGGTCCTCCTCTCCATCGGCGAGTCCTTCATCCCCAT
CCTGGTCATGGCCCTGATCCCTTTCACGGTCCCCCGCCGGGCGTACGGGA
CGGCCTACGGCGTCATGGAGGTCTCGGGTGCGCTCTGTTCCTTTGCAGGT
AACGTCCTGATCGGGTATTTGATCGATCAGGGCCGGCGGGAGGGGAGTGA
GTACACGAACGAGTACGAAGTGCCCATGCTCGCGTTGACGGGACTGGCCG
GCCTGGGCTTGCTGGCGTTCCTGGGGCTCACGTTCTTTGAATTTTGCTGT
GGGCACAAGGGATTGAACACGCGCACGGCCATTGACTACGAGAGTCTGGC
AGGCTTGGATGAGTAG back to top
|