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Properties
| Property Name | Value |
|---|
| Product | putative serca-type calcium atpase |
| Orig transcript id | gnl|cribi|Naga_100222g2.2414.mrna |
| Orig protein id | gnl|cribi|Naga_100222g2.2414 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:835579..839471 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4982 ID=rna4982|Name=rna4982|organism=Nannochloropsis gaditana|type=mRNA|length=781bp
GAAGGAGAGCTCGTACGGCCATCGATATGGACCAATGAACGGGGAATTTG
GTTCGTCAACGAACTATGTCACATGGATGGCTACGATATGCATACGGGAC
TGCTTGAAGACGCAGATTTATGGGTCTCTTGCTTTTTTTAAAGTCACAAT
GTTTTACATCTCCATCCTCCACCTCCTCTCTCAACAGAGCCCTCGACACC
TCTCCTCTCCCACAATTTTGTTTCATTTCTTAAGAGCTGCGACAAGATAC
GCGACATTCAAGAACATAACATCTTCTTAAAACTCCTGCACAAGCGCTTT
ATCTGTCATGGCAGCCCCTCAAGTAGCTTCGTCCACCCCTGCCGACGAGG
AAGAAGAGCCCTTACACATCGATACGGGCGACCAAATGAAAGTGAAACAA
GTGCTGGACGAGGCGGTGGTCAAGGCCATAGTGGACGCGGGATATGAAGA
GAACTTCTTCTACGACAACATCAAACTCGCGCTGATGGTCATTGCATGCG
TCTTCGCCCTCATCGCTCAATTCTACCCAATGCCTTTCCCTGAATCCCGT
CCCCTGCTGGGAGTCTGTTGCCTCGCCTACTTCCTTGCCAGCACCATCAT
CCAGCTCATCGTCTCCTACGTGGAGCAAGATACCATCCTGACGACCCAGC
CGCTGCGCTCGGGGGGGAAGGCGGGAGAAGCCCTGAAAGTACGGACGCAG
TTTCCCCGTTTTCAGGACGAGTACACGGTGTTTGTGGAGGAAGCGGGCAT
GCAGGACCCCCCGACCGTGTCGAGTGAGTAA back to topprotein sequence of rna4982 >rna4982-protein ID=rna4982-protein|Name=rna4982|organism=Nannochloropsis gaditana|type=polypeptide|length=1173bp
MRPLPLLVHSAALVVSLLPAFLLSLPNLARATTNTGGNGGRHGGSSCWRN
RGRGSFLAQAPVLPGGSHGPGGIGGLAGPRGSGGSGIRIAGRGGAAIPPT
SSTSTLPHVPVPPSDYTRHYPAHAVTPLAALRHFVVSEEKGLTAGEAQVR
LAAVGPNELSPPKQTSLLELVAEQFEDRLVQILVMVAVVSSVLSLFEDDP
TAFVEPLVIVMILVINAFVGIWQGRSAEGALDALKKLQPENACVLREGRW
LNDLPARELVPGDIIFVRVGDKVPADARILALKTTTFSCDEGSLTGESAS
VSKFLDPVSEEARIQSKTNMIFSGTMISNGAAYALVVDTGARTEIGKINQ
GVEQAKQEQIKTPLAQKLDEFGNQLTYIIGGICLAVWCFSYPEFSNPVHG
STLKGALYYAKVAVALGVAAIPEGLPAVITLCLSLGTRRMAKRNVIVRKL
PSVETLGCTTVICSDKTGTLTTNQMTCVSLVTLAEGGKAEGGAVMSEFAV
EGVSYNPSGAVEGLMPSGFGAGNALPKGIEDIATIAALCNEAKIVFQDGK
FERIGEPTEAALKVLVEKLHIPGEPRNEDPFVACSQYSKYWEGKYAKLAT
LEFSRDRKSMSVLCRPWNGGGNKLFVKGAPDLLVARCTRLRLASGKTVPL
TNEMRHRIMAKVESMAVRPLRCLGLAMKEGGELGALNKVSTEEEAASSPL
LRNPAQFGQIESGLTLVGICGIKDPARPEAARAILQCREAGVRVIMITGD
SRETAVAIARDVHIFGREEDVSRKAFRGADFFGLSEQEQRSILRSGNLIF
CRTEPQDKQQLVKMLQQEGEVPAMTGDGVNDAPALQQAAIGVAMGITGTE
VCKQAADMVLADDNFATIVSAVEEGRCIYANMQAFICFLISCNIGEILTI
FGATVLGLPEPLTPLHLLWVNLVTDGPPATALGFNPPDPDAMLKPPRSST
EPILSRWLLIRYLITGAYVGFATVGIFVQWFLRRGVTWKELTHWGHCVNW
EDSFAPDLGGLTSLLGEHPDRCDVFGPALASPQTLALSVLVTMEMFKALS
AVSLDNSILRVPPWKNPWLLGGVALPFSIHLAVVYFPFLNQVFGVSSMAD
SDWLNVLQWAAPILLLDEVLKAVGRYLKGKESDARMQERRQRLLQVSAAA
VEAAGHIKENREGTPDEFTQEGR back to topmRNA from alignment at CM002464.1:835579..839471- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4982 ID=rna4982|Name=rna4982|organism=Nannochloropsis gaditana|type=mRNA|length=3893bp|location=Sequence derived from alignment at CM002464.1:835579..839471- (Nannochloropsis gaditana)
GGAAAAGGCTCGGATAGGGAGGAACGCACACGCCGATCATCAGGGTGTGA
GTCAAAGCGTCTTCCTCGCAAAATTAACATCCTTGCTCTTGGCCAGCACT
CCTGATTGCATCTCACCTGCGACCTTTAAACCATGCGGCCTCTTCCTCTT
CTTGTCCATTCCGCCGCCCTCGTGGTTTCTCTTCTCCCTGCCTTCCTCCT
CTCCCTTCCCAACCTGGCCCGCGCAACCACGAACACTGGGGGCAACGGCG
GTAGACATGGAGGCTCTTCGTGTTGGAGAAATCGAGGTCGTGGAAGTTTT
TTAGCGCAAGCACCCGTTCTGCCCGGGGGAAGCCACGGTCCTGGTGGTAT
TGGAGGGCTTGCGGGCCCGCGAGGGTCAGGAGGTTCCGGCATAAGAATTG
CCGGCCGCGGAGGAGCCGCGATCCCACCCACATCGTCCACGTCGACTTTG
CCGCATGTTCCTGTACCCCCATCAGATTACACGCGGCATTACCCCGCGCA
TGCCGTCACTCCTCTGGCGGCCTTGCGGCATTTTGTGGTTTCGGAAGAGA
AAGGTCTCACCGCGGGGGAAGCCCAAGTGCGTCTTGCCGCCGTGGGGCCG
AACGAGTTGAGCCCACCAAAGCAAACATCTTTGTTGGAACTTGTCGCCGA
GCAATTTGAGGACCGGTTGGTGCAGATATTGGTGATGGTCGCGGTCGTAT
CCAGTGTGCTTTCCCTCTTTGAGGATGACCCGACTGCCTTTGTCGAGCCA
CTGGTGATTGTCATGATCCTTGTCATCAACGCTTTCGTGGGCATATGGCA
AGGCCGGTCCGCGGAAGGCGCATTGGACGCGCTAAAAAAACTACAGCCGG
AGAATGCTTGTGTCCTGCGGGAAGGGCGATGGCTGAATGACCTTCCCGCA
CGGGAGTTGGTGCCCGGGGATATCATTTTCGTCCGAGTGGGCGATAAAGT
GCCGGCGGACGCGCGAATATTGGCCTTGAAGACCACCACCTTCTCCTGCG
ACGAAGGCTCCCTGACCGGGGAGAGCGCGAGTGTGTCCAAGTTCCTGGAT
CCTGTCTCGGAGGAAGCCCGGATCCAGAGCAAGACGAACATGATCTTCAG
CGGGACCATGATCAGCAACGGCGCTGCGTATGCCCTGGTGGTGGATACGG
GGGCGCGGACGGAGATTGGGAAAATCAACCAAGGGGTGGAGCAGGCGAAG
CAAGAGCAGATCAAGACTCCCTTGGCCCAGAAATTGGACGAATTCGGCAA
TCAACTCACTTACATTATTGGAGGAATCTGTTTGGCCGTCTGGTGTTTCT
CGTACCCAGAATTTTCCAACCCCGTCCACGGGTCCACACTGAAAGGCGCG
CTCTACTACGCGAAGGTAGCGGTGGCCTTGGGCGTGGCCGCCATCCCCGA
GGGGCTTCCGGCGGTGATCACGCTGTGCCTGTCCTTGGGGACCCGACGCA
TGGCCAAGCGCAACGTCATTGTCCGGAAGCTGCCCTCCGTCGAAACCTTG
GGATGCACCACAGTCATCTGCTCGGACAAGACTGGGACCTTGACCACGAA
CCAGATGACCTGCGTGAGTCTGGTCACTTTGGCGGAAGGTGGGAAGGCGG
AAGGGGGGGCAGTCATGAGCGAATTCGCCGTGGAAGGGGTCAGTTACAAC
CCGAGTGGCGCCGTGGAAGGCTTGATGCCGTCCGGCTTCGGGGCTGGGAA
CGCCCTGCCCAAAGGGATCGAAGACATCGCCACCATCGCCGCGCTTTGCA
ACGAGGCCAAAATCGTTTTCCAGGACGGGAAATTCGAACGGATCGGGGAG
CCTACGGAGGCCGCCCTGAAAGTCCTGGTGGAGAAGCTCCACATTCCCGG
GGAACCCCGGAATGAGGATCCCTTTGTGGCCTGCTCCCAGTACAGCAAGT
ACTGGGAAGGGAAGTACGCGAAACTGGCCACGTTGGAATTTTCCCGGGAC
CGAAAGAGCATGTCCGTCCTTTGTCGGCCTTGGAACGGGGGAGGGAATAA
GCTCTTCGTCAAAGGTGCCCCCGACTTGCTGGTGGCCCGCTGCACGCGGC
TGCGTCTGGCGAGCGGGAAAACCGTGCCCCTGACGAACGAGATGCGGCAC
CGGATCATGGCCAAGGTGGAGAGCATGGCCGTTCGGCCCTTGAGGTGTTT
GGGGCTGGCGATGAAGGAGGGGGGAGAGCTGGGCGCACTGAACAAAGTGA
GCACGGAGGAGGAAGCGGCATCGAGCCCCTTGTTGCGGAACCCCGCGCAG
TTCGGTCAGATCGAAAGCGGGCTGACCCTGGTCGGCATTTGTGGGATCAA
GGACCCGGCCCGACCGGAGGCTGCCCGGGCGATACTGCAATGTCGCGAGG
CGGGCGTGCGGGTGATCATGATCACGGGGGACTCGCGGGAAACGGCGGTG
GCAATTGCCAGGGACGTGCACATTTTTGGGCGGGAGGAAGACGTGAGTCG
CAAGGCCTTTCGGGGCGCGGACTTTTTCGGGTTGTCGGAGCAGGAGCAAC
GGTCAATTTTGCGGTCGGGCAATTTGATTTTCTGTCGGACCGAGCCCCAG
GACAAGCAGCAGCTGGTGAAGATGTTACAACAGGAAGGGGAAGTGCCGGC
GATGACGGGGGATGGGGTCAACGACGCACCGGCGTTGCAACAGGCGGCGA
TCGGTGTGGCAATGGGGATCACGGGTACTGAGGTGTGCAAGCAGGCAGCG
GACATGGTCTTGGCCGACGACAACTTCGCCACCATTGTCTCGGCCGTGGA
GGAAGGCCGGTGCATCTACGCGAACATGCAGGCTTTCATCTGTTTCCTGA
TTTCTTGCAACATTGGTGAGATACTGACCATCTTTGGCGCCACCGTGTTG
GGGTTGCCTGAGCCTTTGACCCCTCTTCACCTGCTGTGGGTGAATCTGGT
GACGGACGGCCCCCCCGCCACCGCGCTGGGCTTCAATCCGCCCGACCCGG
ACGCCATGCTCAAGCCGCCGCGCAGCTCCACCGAACCCATCCTGAGCCGA
TGGCTGCTGATTCGCTACCTGATCACGGGGGCTTACGTGGGCTTTGCAAC
AGTGGGGATTTTTGTGCAATGGTTCCTGCGACGTGGGGTCACCTGGAAAG
AATTGACGCATTGGGGCCATTGCGTGAACTGGGAGGACAGCTTCGCGCCG
GACTTGGGCGGGTTGACGTCCCTTTTGGGCGAGCACCCCGACAGATGCGA
CGTCTTCGGCCCCGCCCTCGCCTCCCCTCAGACCTTGGCACTCTCCGTGC
TCGTGACCATGGAGATGTTCAAGGCTCTCTCCGCGGTCTCCCTGGACAAT
TCCATTCTTCGGGTCCCACCTTGGAAAAACCCATGGCTTCTGGGGGGCGT
GGCCCTCCCTTTTTCCATCCACTTGGCCGTAGTCTACTTCCCGTTCCTGA
ACCAGGTCTTCGGCGTGTCGAGCATGGCCGACTCCGACTGGCTCAACGTC
CTCCAATGGGCCGCCCCCATCTTGCTCCTCGACGAGGTCCTCAAAGCGGT
GGGTCGGTATTTAAAAGGCAAGGAGAGCGACGCTCGGATGCAAGAACGAC
GTCAACGTCTGCTCCAAGTCTCTGCCGCGGCCGTGGAGGCGGCTGGGCAT
ATCAAAGAGAACCGGGAGGGGACGCCGGACGAATTCACGCAGGAGGGGCG
GTGAGGGAGGGTGGAGGGACTGTTTGAGTGGGGGGCCAGAGAGGTTCCAG
GCAGCAAGCAGGGACACCGGGCTCATCTTGCAGGCGTGGAAAGGGCGAGG
GAATGGGGGAAGGAAGGGGGATATACATAGGGTGGGCGGGATGGCGGGGC
GGTGGCGGGGGACGAGGTTCATAAGAAGGATGGCAACAGCTGCCCCAGCA
AGACGAGTAATTGGCTACGAAAAAAAATTCGAGGGGAAATTAC back to topCoding sequence (CDS) from alignment at CM002464.1:835579..839471- >rna4982 ID=rna4982|Name=rna4982|organism=Nannochloropsis gaditana|type=CDS|length=3522bp|location=Sequence derived from alignment at CM002464.1:835579..839471- (Nannochloropsis gaditana)
ATGCGGCCTCTTCCTCTTCTTGTCCATTCCGCCGCCCTCGTGGTTTCTCT
TCTCCCTGCCTTCCTCCTCTCCCTTCCCAACCTGGCCCGCGCAACCACGA
ACACTGGGGGCAACGGCGGTAGACATGGAGGCTCTTCGTGTTGGAGAAAT
CGAGGTCGTGGAAGTTTTTTAGCGCAAGCACCCGTTCTGCCCGGGGGAAG
CCACGGTCCTGGTGGTATTGGAGGGCTTGCGGGCCCGCGAGGGTCAGGAG
GTTCCGGCATAAGAATTGCCGGCCGCGGAGGAGCCGCGATCCCACCCACA
TCGTCCACGTCGACTTTGCCGCATGTTCCTGTACCCCCATCAGATTACAC
GCGGCATTACCCCGCGCATGCCGTCACTCCTCTGGCGGCCTTGCGGCATT
TTGTGGTTTCGGAAGAGAAAGGTCTCACCGCGGGGGAAGCCCAAGTGCGT
CTTGCCGCCGTGGGGCCGAACGAGTTGAGCCCACCAAAGCAAACATCTTT
GTTGGAACTTGTCGCCGAGCAATTTGAGGACCGGTTGGTGCAGATATTGG
TGATGGTCGCGGTCGTATCCAGTGTGCTTTCCCTCTTTGAGGATGACCCG
ACTGCCTTTGTCGAGCCACTGGTGATTGTCATGATCCTTGTCATCAACGC
TTTCGTGGGCATATGGCAAGGCCGGTCCGCGGAAGGCGCATTGGACGCGC
TAAAAAAACTACAGCCGGAGAATGCTTGTGTCCTGCGGGAAGGGCGATGG
CTGAATGACCTTCCCGCACGGGAGTTGGTGCCCGGGGATATCATTTTCGT
CCGAGTGGGCGATAAAGTGCCGGCGGACGCGCGAATATTGGCCTTGAAGA
CCACCACCTTCTCCTGCGACGAAGGCTCCCTGACCGGGGAGAGCGCGAGT
GTGTCCAAGTTCCTGGATCCTGTCTCGGAGGAAGCCCGGATCCAGAGCAA
GACGAACATGATCTTCAGCGGGACCATGATCAGCAACGGCGCTGCGTATG
CCCTGGTGGTGGATACGGGGGCGCGGACGGAGATTGGGAAAATCAACCAA
GGGGTGGAGCAGGCGAAGCAAGAGCAGATCAAGACTCCCTTGGCCCAGAA
ATTGGACGAATTCGGCAATCAACTCACTTACATTATTGGAGGAATCTGTT
TGGCCGTCTGGTGTTTCTCGTACCCAGAATTTTCCAACCCCGTCCACGGG
TCCACACTGAAAGGCGCGCTCTACTACGCGAAGGTAGCGGTGGCCTTGGG
CGTGGCCGCCATCCCCGAGGGGCTTCCGGCGGTGATCACGCTGTGCCTGT
CCTTGGGGACCCGACGCATGGCCAAGCGCAACGTCATTGTCCGGAAGCTG
CCCTCCGTCGAAACCTTGGGATGCACCACAGTCATCTGCTCGGACAAGAC
TGGGACCTTGACCACGAACCAGATGACCTGCGTGAGTCTGGTCACTTTGG
CGGAAGGTGGGAAGGCGGAAGGGGGGGCAGTCATGAGCGAATTCGCCGTG
GAAGGGGTCAGTTACAACCCGAGTGGCGCCGTGGAAGGCTTGATGCCGTC
CGGCTTCGGGGCTGGGAACGCCCTGCCCAAAGGGATCGAAGACATCGCCA
CCATCGCCGCGCTTTGCAACGAGGCCAAAATCGTTTTCCAGGACGGGAAA
TTCGAACGGATCGGGGAGCCTACGGAGGCCGCCCTGAAAGTCCTGGTGGA
GAAGCTCCACATTCCCGGGGAACCCCGGAATGAGGATCCCTTTGTGGCCT
GCTCCCAGTACAGCAAGTACTGGGAAGGGAAGTACGCGAAACTGGCCACG
TTGGAATTTTCCCGGGACCGAAAGAGCATGTCCGTCCTTTGTCGGCCTTG
GAACGGGGGAGGGAATAAGCTCTTCGTCAAAGGTGCCCCCGACTTGCTGG
TGGCCCGCTGCACGCGGCTGCGTCTGGCGAGCGGGAAAACCGTGCCCCTG
ACGAACGAGATGCGGCACCGGATCATGGCCAAGGTGGAGAGCATGGCCGT
TCGGCCCTTGAGGTGTTTGGGGCTGGCGATGAAGGAGGGGGGAGAGCTGG
GCGCACTGAACAAAGTGAGCACGGAGGAGGAAGCGGCATCGAGCCCCTTG
TTGCGGAACCCCGCGCAGTTCGGTCAGATCGAAAGCGGGCTGACCCTGGT
CGGCATTTGTGGGATCAAGGACCCGGCCCGACCGGAGGCTGCCCGGGCGA
TACTGCAATGTCGCGAGGCGGGCGTGCGGGTGATCATGATCACGGGGGAC
TCGCGGGAAACGGCGGTGGCAATTGCCAGGGACGTGCACATTTTTGGGCG
GGAGGAAGACGTGAGTCGCAAGGCCTTTCGGGGCGCGGACTTTTTCGGGT
TGTCGGAGCAGGAGCAACGGTCAATTTTGCGGTCGGGCAATTTGATTTTC
TGTCGGACCGAGCCCCAGGACAAGCAGCAGCTGGTGAAGATGTTACAACA
GGAAGGGGAAGTGCCGGCGATGACGGGGGATGGGGTCAACGACGCACCGG
CGTTGCAACAGGCGGCGATCGGTGTGGCAATGGGGATCACGGGTACTGAG
GTGTGCAAGCAGGCAGCGGACATGGTCTTGGCCGACGACAACTTCGCCAC
CATTGTCTCGGCCGTGGAGGAAGGCCGGTGCATCTACGCGAACATGCAGG
CTTTCATCTGTTTCCTGATTTCTTGCAACATTGGTGAGATACTGACCATC
TTTGGCGCCACCGTGTTGGGGTTGCCTGAGCCTTTGACCCCTCTTCACCT
GCTGTGGGTGAATCTGGTGACGGACGGCCCCCCCGCCACCGCGCTGGGCT
TCAATCCGCCCGACCCGGACGCCATGCTCAAGCCGCCGCGCAGCTCCACC
GAACCCATCCTGAGCCGATGGCTGCTGATTCGCTACCTGATCACGGGGGC
TTACGTGGGCTTTGCAACAGTGGGGATTTTTGTGCAATGGTTCCTGCGAC
GTGGGGTCACCTGGAAAGAATTGACGCATTGGGGCCATTGCGTGAACTGG
GAGGACAGCTTCGCGCCGGACTTGGGCGGGTTGACGTCCCTTTTGGGCGA
GCACCCCGACAGATGCGACGTCTTCGGCCCCGCCCTCGCCTCCCCTCAGA
CCTTGGCACTCTCCGTGCTCGTGACCATGGAGATGTTCAAGGCTCTCTCC
GCGGTCTCCCTGGACAATTCCATTCTTCGGGTCCCACCTTGGAAAAACCC
ATGGCTTCTGGGGGGCGTGGCCCTCCCTTTTTCCATCCACTTGGCCGTAG
TCTACTTCCCGTTCCTGAACCAGGTCTTCGGCGTGTCGAGCATGGCCGAC
TCCGACTGGCTCAACGTCCTCCAATGGGCCGCCCCCATCTTGCTCCTCGA
CGAGGTCCTCAAAGCGGTGGGTCGGTATTTAAAAGGCAAGGAGAGCGACG
CTCGGATGCAAGAACGACGTCAACGTCTGCTCCAAGTCTCTGCCGCGGCC
GTGGAGGCGGCTGGGCATATCAAAGAGAACCGGGAGGGGACGCCGGACGA
ATTCACGCAGGAGGGGCGGTGA back to top
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