EWM25729.1, cds4942 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|585107591|gb|EWM25729.1| (protein prenyltransferase alpha subunit repeat containing 1 [Nannochloropsis gaditana]) HSP 1 Score: 1206.43 bits (3120), Expect = 0.000e+0 Identity = 591/591 (100.00%), Postives = 591/591 (100.00%), Query Frame = 0
Query: 1 MCRARGGHNTPGNRRLWESTEEPWTAAACFLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVILQDLRLQDGNKRENDVMGNNELEEVSRISRASEKIRAVGGGKRRKDHKDEEGREKTQESGGEMEAWSVEQTERLWNWATGSRMGDMSAFHHLQQVLTLLAAYPSWRFLLAEIGRAGGGKEGARETSHLRVRMRGRRIKSEDDRDQACSELPGRNCAEEATQEGLLGVLQMFLARNARLLDQYPGRESLWYQRRGFLSLLGAIMRRGCPWAGGRGGGDWPQLSNEEAGGEKARLSQHGKAKLPSLSDPCARWIESELARASHYLQGRGPWEGRAGLMWDVESRRRQRLLAWSFKCWVILRWENRGATPTAQKLRPLREELASLEASQPNMAIPPGYKHLVRVGDR 591
MCRARGGHNTPGNRRLWESTEEPWTAAACFLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVILQDLRLQDGNKRENDVMGNNELEEVSRISRASEKIRAVGGGKRRKDHKDEEGREKTQESGGEMEAWSVEQTERLWNWATGSRMGDMSAFHHLQQVLTLLAAYPSWRFLLAEIGRAGGGKEGARETSHLRVRMRGRRIKSEDDRDQACSELPGRNCAEEATQEGLLGVLQMFLARNARLLDQYPGRESLWYQRRGFLSLLGAIMRRGCPWAGGRGGGDWPQLSNEEAGGEKARLSQHGKAKLPSLSDPCARWIESELARASHYLQGRGPWEGRAGLMWDVESRRRQRLLAWSFKCWVILRWENRGATPTAQKLRPLREELASLEASQPNMAIPPGYKHLVRVGDR
Sbjct: 1 MCRARGGHNTPGNRRLWESTEEPWTAAACFLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVILQDLRLQDGNKRENDVMGNNELEEVSRISRASEKIRAVGGGKRRKDHKDEEGREKTQESGGEMEAWSVEQTERLWNWATGSRMGDMSAFHHLQQVLTLLAAYPSWRFLLAEIGRAGGGKEGARETSHLRVRMRGRRIKSEDDRDQACSELPGRNCAEEATQEGLLGVLQMFLARNARLLDQYPGRESLWYQRRGFLSLLGAIMRRGCPWAGGRGGGDWPQLSNEEAGGEKARLSQHGKAKLPSLSDPCARWIESELARASHYLQGRGPWEGRAGLMWDVESRRRQRLLAWSFKCWVILRWENRGATPTAQKLRPLREELASLEASQPNMAIPPGYKHLVRVGDR 591
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|762141206|ref|XP_011453785.1| (PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1 [Crassostrea gigas] >gi|405974775|gb|EKC39397.1| prenyltransferase alpha subunit repeat-containing protein 1 [Crassostrea gigas]) HSP 1 Score: 111.309 bits (277), Expect = 8.941e-23 Identity = 74/241 (30.71%), Postives = 112/241 (46.47%), Query Frame = 0
Query: 30 FLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPT-----TRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMR---------------DGEEDVRR---WCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVI 247
F DP IDEYDF+ +P + + P +L+ HKLGI +W+VK ++Q A + LIG PP LDPT TRA+LL+NAD +AWN RK L+ G L E++ F +VL+KH K ++HR+W + ++ + G T + + ++ M D D+ + + KEM + + A P NY AW+ R+WV+
Sbjct: 18 FRRDPEIDEYDFLPVPEPKHNRS-----PLVLQEHKLGIESWSVKILFQYAYN-----------QLIGWRNNTPP----TKFLDPTELCSLTRAILLVNADCSTAWNTRKELVDNGDLSVTEDLKFGGLVLKKHPKSPETFSHRKWLLHRFIDNCLA----SSIGSNTSSGSNACDRFVNMEAIDLNMDASFNGPNFDNAPDLINQPDYNELMRKEMNVCKNAADNHPCNYNAWSHRIWVL 234
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|260783284|ref|XP_002586706.1| (hypothetical protein BRAFLDRAFT_217651 [Branchiostoma floridae] >gi|229271829|gb|EEN42717.1| hypothetical protein BRAFLDRAFT_217651 [Branchiostoma floridae]) HSP 1 Score: 107.071 bits (266), Expect = 7.583e-22 Identity = 70/218 (32.11%), Postives = 107/218 (49.08%), Query Frame = 0
Query: 30 FLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVI 247
F P IDE FI P + + P ++EN+KLGI TW ++ I+ Y + R + + ++ LL+ TRA+LL+ AD +AWNIRK L+ A L++ +++ F +VL KH K +AHRRW + V++K S +P R E C ++ E E+A+ ++ A +P NYYAWT R WV+
Sbjct: 17 FQRHPNIDEVGFICCPTCQHNRS-----PVVVENNKLGIETWCLELIF-----PYAHDKVLRARSRDDSGRKIKVSRSARSLLE-ATRAVLLVQADCLTAWNIRKELVEAEDLKSIQDLKFAALVLTKHPKSSETFAHRRWLLKQVVQKTSSTSLQPHP------RGRKAELPCDE-----------KLLEAELAVCQRSAERYPSNYYAWTHRAWVV 206
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|1126183226|ref|XP_019624168.1| (PREDICTED: LOW QUALITY PROTEIN: protein prenyltransferase alpha subunit repeat-containing protein 1-like [Branchiostoma belcheri]) HSP 1 Score: 107.457 bits (267), Expect = 3.226e-21 Identity = 73/237 (30.80%), Postives = 112/237 (47.26%), Query Frame = 0
Query: 30 FLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREP----ETGRRTVMSARSQEQGCT----------MRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVILQDLR 252
F P IDE FI P + + P ++EN+KLGI TW ++ I+ Y + R N ++ LL+ TRA+LL+ AD +AWNIRK L+ A L+ +++ F +VL KH K +AHRRW + +++K S +P + + A Q G + G ++ ++ E E+A+ + A +P NYYAWT R WV+ Q R
Sbjct: 17 FQRHPNIDEVGFIPCPTCQHNRS-----PVVVENNKLGIETWCLELIF-----PYAHDKVLRARGRDDNGRKIKVSRSARSLLE-ATRAVLLVQADCLTAWNIRKELVEAEDLKCIQDLKFAALVLTKHPKSSETFAHRRWLLKQIVQKTTSTSLQPSPVSQASHTNGLVAGDQASGGAAAVPPLNARGTKSGGAELPCDEKLLETELAVCQSSAERYPSNYYAWTHRAWVVEQVAR 242
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|908470046|ref|XP_013088227.1| (PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1-like [Biomphalaria glabrata]) HSP 1 Score: 106.686 bits (265), Expect = 3.604e-21 Identity = 78/241 (32.37%), Postives = 114/241 (47.30%), Query Frame = 0
Query: 30 FLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPT-----TRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRW--------CVAHVLEKARSHLREPETGRRTVMS---------ARSQEQGCTMRDGEEDVRRWCRMKEK-EMAMTRQIAALFPRNYYAWTQRLWVI 247
F DP IDEYD LP E + + PFLL+ HKLG+ WAVK + + Y + R LIG + P +DPT TRAL+L N D Y+AWN+RK L+ +G L +++ F +VL KH K + HRRW C++ L+ S PE + +S A + G D + R ++ + EM + + A + NY+AW+ R+W+I
Sbjct: 17 FKRDPNIDEYDI--LPVLEPTHNRS---PFLLQEHKLGVEAWAVKVLMK-----YVATR------LIGWRSQNPL----VKFIDPTEVLNLTRALILFNPDNYTAWNVRKELVESGFLNIADDLQFGALVLSKHPKSAETFIHRRWLFQQLLDHCLSSSLDSNGSVAAVPENNADSSISMDLIDVDIVASPENDGPLSMDQSLECSRLFKLHTQLEMRVCARAAERYQCNYHAWSHRIWII 237
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|669163228|ref|XP_008617176.1| (hypothetical protein SDRG_12872 [Saprolegnia diclina VS20] >gi|530731167|gb|EQC29409.1| hypothetical protein SDRG_12872 [Saprolegnia diclina VS20]) HSP 1 Score: 103.99 bits (258), Expect = 1.519e-20 Identity = 70/217 (32.26%), Postives = 105/217 (48.39%), Query Frame = 0
Query: 27 AACFLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQR 243
+A F +DP IDE I L ED + F+LE+HKLGIA + A+++EA +++ R R+ D D + TR +LL+ AD Y+AWN RK+LL+ G L +EI+F+++VL HSK WAHRRW VL+ R V++ + E+A+ ++ +PRNY+AW+ R
Sbjct: 11 SALFAADPDIDEIGIIYL---EDPAE-----AFVLEDHKLGIALDMLPALHREAKDVFFAAR----------------RSNDVDSIREATRCMLLVCADFYTAWNARKQLLVQGLLSLRDEITFMNVVLSHHSKSIDTWAHRRW----VLD-------------RLVVTTLTAS-----------------FLSDELALCLRLTEQYPRNYHAWSYR 169
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|813111120|ref|XP_012195105.1| (hypothetical protein SPRG_01505 [Saprolegnia parasitica CBS 223.65] >gi|641540587|gb|KDO34369.1| hypothetical protein SPRG_01505 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 102.449 bits (254), Expect = 4.719e-20 Identity = 69/217 (31.80%), Postives = 106/217 (48.85%), Query Frame = 0
Query: 27 AACFLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQR 243
+A F +DP IDE I L ED + F+L++HKLGIA + A+++EA +++ R R+ D D + TR +LL+ AD Y+AWN RK+LL+ G L +EI+F+++VL HSK WAHRRW VL++ + A + + D E+A+ ++ +PRNY+AW+ R
Sbjct: 11 SALFAADPDIDEIGLIYL---EDPAE-----AFVLKDHKLGIALDMLPALHREAKDVFFAAR----------------RSNDVDRIREATRCMLLVCADFYTAWNARKQLLVQGLLSLRDEITFINVVLSHHSKSIDTWAHRRW----VLDR---------------LVATTPLTASFLSD--------------ELALCLRLTEQYPRNYHAWSYR 170
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|291222421|ref|XP_002731215.1| (PREDICTED: protein prenyltransferase alpha subunit repeat-containing protein 1-like [Saccoglossus kowalevskii]) HSP 1 Score: 100.908 bits (250), Expect = 3.614e-19 Identity = 73/231 (31.60%), Postives = 111/231 (48.05%), Query Frame = 0
Query: 30 FLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQG----CTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVILQDLRLQDG 256
F DP IDE FI P + P +L+ HKLG+ +W + +YQ A Y L AR E R +DL+ TRA+L+IN + Y+ WN+RK L+ + KL ++ F ++ + K +AHR+W +L + R L+E + SAR+ ++ G+EDV + E E + A + NY AW+ R+WV LQ+L + DG
Sbjct: 18 FTRDPSIDEVGFIPCPEALQNRS-----PIILQEHKLGLESWCISLLYQYA---YNELLQAR---------EKTVRLVPSDLIG-CTRAVLIINPECYTVWNMRKELVCSHKLDIAADLKFNGLIFTRQPKSPETFAHRKW----LLVQLRQRLQETKDMIDAKDSARNHDENGRHVVGNHRGKEDVVISDSIVENEFKVCTLAAEHYSNNYSAWSHRIWV-LQNLAVCDG 225
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|676421734|ref|XP_009043847.1| (hypothetical protein LOTGIDRAFT_102637 [Lottia gigantea] >gi|556116650|gb|ESP05302.1| hypothetical protein LOTGIDRAFT_102637 [Lottia gigantea]) HSP 1 Score: 96.6709 bits (239), Expect = 1.586e-18 Identity = 62/225 (27.56%), Postives = 102/225 (45.33%), Query Frame = 0
Query: 30 FLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPT-----TRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHL--REPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVI 247
F DP IDEYD LP E + P ++ +HKLG+ W V +YQ A +S R +NG +DP RA+LL+N + Y+AWNIRK + + L +++ ++L KH K + HRRW + + + L + + T++ + +++ R+ +E A+ A +P NY+AW+ R+W+I
Sbjct: 17 FKRDPNIDEYDV--LPVIEPKHNKS---PLVVVDHKLGVELWCVSILYQHAYDRLFSWRD---------------KNGGGKFIDPVEVGNLCRAVLLVNPECYTAWNIRKECVESCTLNIEDDLKLGRLILTKHPKSPETFIHRRWLLQRYINQCLIFLPTNQNSSSNNTLIPVQLN----------TNIQ---RLVTQEFAVCLHAAEHYPCNYHAWSHRIWLI 208
BLAST of EWM25729.1 vs. NCBI_GenBank
Match: gi|675374850|gb|KFM67752.1| (Protein prenyltransferase alpha subunit repeat-containing protein 1-B, partial [Stegodyphus mimosarum]) HSP 1 Score: 93.5893 bits (231), Expect = 2.830e-18 Identity = 60/224 (26.79%), Postives = 104/224 (46.43%), Query Frame = 0
Query: 30 FLSDPYIDEYDFISLPATEDSGKDTVSCPFLLENHKLGIATWAVKAIYQEALSTYYSLRAARTEALIGNDKEGPPRNGDADLLDPTTRALLLINADMYSAWNIRKRLLLAGKLRAHEEISFLDIVLRKHSKKGSAWAHRRWCVAHVLEKARSHLREPETGRRTVMSARSQEQGCTMRDGEEDVRRWCRMKEKEMAMTRQIAALFPRNYYAWTQRLWVILQDLRL 253
F DP IDE+D LP E S ++T CP + HK+ + W +K +Y A + +++ + P ++D L T A+LLIN ++ + WN RK L+ L +++ F +IVL + K +AHR+W + ++ +++ CT++ ++ E E + ++A L+P NYYAW R W+I + L +
Sbjct: 18 FKKDPLIDEFDI--LPVHE-SVRNT--CPVIHIEHKVALEDWCIKHVYVYAYNKFFAWK-------------KKPCKFESDKLLIWTCAILLINPEIETVWNARKELVCQNILTPEDDLRFSEIVLSRKPKSSQVFAHRKWILLELI--------------------KNKPSTCTLQ----------QIIEHEFLLCTRVANLYPNNYYAWCHRSWIIQEVLHV 193 The following BLAST results are available for this feature:
BLAST of EWM25729.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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