Naga_100162g9, gene4764 (gene) Nannochloropsis gaditana

Overview
NameNaga_100162g9
Unique Namegene4764
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:706033..708345 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100162g9
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:706033..708345 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL009ngnoL009Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02760NO12G02760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4934rna4934-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4934rna4934Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4934

>rna4934-protein ID=rna4934-protein|Name=rna4934|organism=Nannochloropsis gaditana|type=polypeptide|length=680bp
MTEKTHFACFTGKRNVFAITSPPPRFLVVVLQMRFECRCGVSTVKKYPIK
PRMPLHVGFSSLPKCRTLLPLLFLFFVTCLTPTLRVSGFAAPSPVSHIDR
FKRLQNQFDLRGTALASNDGSKEVTLSPREAYFLGQAFATWIIRELSPQS
SASTSAETLPITIAAGRDSRLTGPALSYSFLEGVETVCGAAAPVDLGLCS
TPATFHACLDPPLGLGVSASVMVTASHLPMDRNGFKMFSRQGKGGLTEAE
VSDVVALAAEIFQDQHGAYPNLDIPTTRPHPHWLKAHRFLQDVYGKHLSQ
LIRNCAAKGQNFEKPLEGMRVVLNPVNGAGGFFVHVLEACGADTRGSFNL
APDGHFPNEPPNPEDPATMRATVQAVAAAGADLGVILDPDCDRVGLVSGV
GKAAGGDRAPIALNRNRLIAMAAAVVLRDHPGSTIVTDSVTSEGLSRFIA
KRGGKHLRYQKGYRNVIEKGESLPDCWLAMECSGHAAFRENRFLDDGAFL
AVKLIGEMASPVSALTGGKDIAVFTPSAGFEGANLLALIADLDEPVEYVE
IRLPVLRGRDREVAIEQVLKAFEWVVSVTSWWKMEKYNYEGLRAKVQEGG
GRKAGWLHFRASLHDPVISLTCESEVEGGVAAMLGTLIDCGMPDATSDTL
VNDLPYWMSRKMVGRLDEFQRTCNHSCVDK
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Synonyms
Publications