rna4903, rna4903 (mRNA) Nannochloropsis gaditana

Overview
Namerna4903
Unique Namerna4903
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length879
Alignment locationCM002464.1:632062..632652 -

Link to JBrowse

Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100176g9.1055.mrna
Orig protein idgnl|cribi|Naga_100176g9.1055
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:632062..632652 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100176g9gene4736Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25786.1cds4891Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4903rna4903-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4903 ID=rna4903|Name=rna4903|organism=Nannochloropsis gaditana|type=mRNA|length=879bp
ATGCTGCACGAGCGGGGCACGCGCAAGTTCCGCGGAGTGTTGTTCGTCAC
CTACAAGAAGGCTGGCGACACCGCCCGAGCCCTGAAGGAAATGGAGGGAG
CCCGCATCGACAACCGCGCTGTCTTCTTGGCCGCCTCGGAGAGGACGAGG
AACCGCGGGTCGCTGGGCAAGGGAGAATCTCGCTACTTCCTGGTGGACAA
AGCCTTATTCTGTCGGCGCTGCCACGACGTGGGCCACACGATGAAGTTCT
GCCCCAACCCTCCGAAGGCCAGGCCGTGCACCATCTGTGCGGCGCTGACA
GGGCACCAGGACGACGACTGCCCCGAGCTTGCCCTCGGCACGCCCGAGGG
CGCCCTCTGTCTGCAGTGCGGAGCCACCGATCACGAGGACAGCGCCTGCG
TACATCGACTGCAAGCCGCGGCGGCACTGAAGGCAGATGCCGGCGTCCGC
TGTCTCTCTTGCGCGAGACTCGGGCACGGAGCTCTTTGCGGGCCGCATGC
TTCAACAAACGCGCCCACTGGGGAGGTCGGCTTCGGACGCAGAGCTCCCC
ACTTCGTGTGTTGCTTTCAGTGCGGGTCGGCTGGGCATTTCGGATACCAC
TGTAACTATCGGCCGCAGGAGGCCTTCCAGTTAAGACGCCACAGCTACTC
GGGCACTCACGTGAGATATAACGTTGATGACCCCCCTGCGCCAGACCCTC
CGCCGCCTGTTCATACTGTCCCCTCCAATATTCCACAACACCATTTGGTT
CCTGGGCCGATGGTTTCGACAATCTATTCCCAGCGTGGACGTGGATTGAG
CCCCGGAGGAAGAATCGGGTTACTTTTTATGAGGCAAGTCGGTGGAGGAA
TCGCACTGAAGCGCACTGAGACAAAGTAA
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protein sequence of rna4903

>rna4903-protein ID=rna4903-protein|Name=rna4903|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MDKTDEEKKGGKKGRAAKRSKFLNSYALKGVENKGEASERDGGRREHSLT
EPSTPSVPGSPSPLTGNATERLSTTTLVTDRKAEKTHDGCKEDVPLSTTT
SASPSESPVSTSLRSSAPAEGPTPLSGKVSTVAHAQSTARTVPAPLKTAA
TLSSFAKRLLAPRAPQQVEVPETIPPQRFYTGGFWTRARASPNRRR
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mRNA from alignment at CM002464.1:632062..632652-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4903 ID=rna4903|Name=rna4903|organism=Nannochloropsis gaditana|type=mRNA|length=591bp|location=Sequence derived from alignment at CM002464.1:632062..632652- (Nannochloropsis gaditana)
ATGGACAAGACCGACGAAGAAAAGAAGGGGGGAAAGAAGGGCAGGGCAGC
CAAACGGAGCAAATTTCTGAACTCTTACGCACTGAAGGGTGTGGAAAATA
AGGGCGAAGCGTCAGAGCGTGACGGGGGTAGGCGGGAGCACTCCCTTACG
GAGCCAAGCACGCCTTCAGTCCCCGGTTCCCCTTCACCGCTTACAGGCAA
CGCCACAGAGCGGCTCTCCACTACGACTCTCGTGACCGACCGAAAGGCGG
AGAAGACACATGATGGTTGCAAGGAAGACGTTCCCTTGTCGACCACGACA
AGTGCTTCTCCCTCGGAAAGCCCTGTTTCGACCTCTCTTCGATCTTCGGC
GCCCGCAGAAGGTCCCACCCCTCTTTCCGGTAAGGTTTCAACAGTCGCAC
ACGCTCAGTCTACTGCACGGACAGTTCCTGCCCCCCTCAAGACCGCAGCT
ACCTTGTCGAGCTTTGCGAAGAGGTTGCTGGCTCCGCGTGCTCCGCAACA
GGTAGAGGTGCCGGAGACCATTCCCCCTCAACGATTTTATACTGGAGGGT
TTTGGACAAGAGCACGTGCATCGCCCAACCGCCGAAGATGA
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Coding sequence (CDS) from alignment at CM002464.1:632062..632652-

>rna4903 ID=rna4903|Name=rna4903|organism=Nannochloropsis gaditana|type=CDS|length=591bp|location=Sequence derived from alignment at CM002464.1:632062..632652- (Nannochloropsis gaditana)
ATGGACAAGACCGACGAAGAAAAGAAGGGGGGAAAGAAGGGCAGGGCAGC
CAAACGGAGCAAATTTCTGAACTCTTACGCACTGAAGGGTGTGGAAAATA
AGGGCGAAGCGTCAGAGCGTGACGGGGGTAGGCGGGAGCACTCCCTTACG
GAGCCAAGCACGCCTTCAGTCCCCGGTTCCCCTTCACCGCTTACAGGCAA
CGCCACAGAGCGGCTCTCCACTACGACTCTCGTGACCGACCGAAAGGCGG
AGAAGACACATGATGGTTGCAAGGAAGACGTTCCCTTGTCGACCACGACA
AGTGCTTCTCCCTCGGAAAGCCCTGTTTCGACCTCTCTTCGATCTTCGGC
GCCCGCAGAAGGTCCCACCCCTCTTTCCGGTAAGGTTTCAACAGTCGCAC
ACGCTCAGTCTACTGCACGGACAGTTCCTGCCCCCCTCAAGACCGCAGCT
ACCTTGTCGAGCTTTGCGAAGAGGTTGCTGGCTCCGCGTGCTCCGCAACA
GGTAGAGGTGCCGGAGACCATTCCCCCTCAACGATTTTATACTGGAGGGT
TTTGGACAAGAGCACGTGCATCGCCCAACCGCCGAAGATGA
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Synonyms
Publications