Naga_100021g66, gene4721 (gene) Nannochloropsis gaditana

Overview
NameNaga_100021g66
Unique Namegene4721
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:598635..605170 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100021g66
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:598635..605170 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0009056catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02380NO12G02380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4888rna4888-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4888rna4888Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4888

>rna4888-protein ID=rna4888-protein|Name=rna4888|organism=Nannochloropsis gaditana|type=polypeptide|length=2104bp
MGKDRVKDRKKTHASSSSAASSLLSRTSFIGFSDVTSSSTTDGGGFTGGD
ARVNTQLTSSPSLEGSVVGRTITTSSSRVYDDNISPTPFYTGGDADLLVV
FKRLGKKDAMTKHKALLELARLIKSSGSELSSSVVEGLLPYWVHVYPRLV
LLENDRRVREVLFSTTLPALFARDRKSMVRVLGPHLIGPWWLAMRDSQKE
VANAANRAFVTIFPKDLRRSDILIESAPVIIGYLHTNLRLTREEVALDMS
DSARSSTDETEERLERICVCSLTALAALLMALDQETLSRLAGTVSTEEAP
DPNPARGGAPTAAPSLATPASGPNSIFVEGHSESLTEVIKDEAMWKFLQD
PRPFVRRAAYRLLAAVAGQAGSAMGHRGQADMVAQQICKMLGERERGNFP
AMWEGILVFLRHFPETLTSALDCKAQLFPRLLKLVRASFCGAAQVSCPSL
LPFVASVPPALSRAFSVDLLGSLWTGASADKHDGEEPYMVAIIEIATYML
IRQPCQDAEEHLVANKKELERSIGPLDGNNAGLVFVREILRALARVLARE
ARSGQPQAFQALLTALVQFNNAGMERGGRRHCLFLDFDDCFWRGVQVVAL
RVLGIDDQTSDASDYNEALSLIPEAGPWQVESRSVWLSKLLVDCYERGAS
PGATGQGRVETTLYFLFWQCVLQCQARDQYKATLLPYLSFMKPIVSLIPL
ERLFAVSPSPPYASSSSLVLYFLLPTLEKQMDLIDVKGSKAVVKYLVAIT
TIVNSWLGEEGHWQELLGTLTRNVDIKRTGRLEFLSETFDSLSTTYELAR
TSLIAHGCPENSLNLTLLVSDALAPYVREIIETDDVGKRNDETVAFLASC
LGVRRSGDYKAGEGDKPQFDLTSEEIKSQLRQPQLDSSAIGRLVERTLAR
GSHVGLEAFMLALDHHDAGRSILGAVREKVPAILSSAFKNIGPSVDVRIA
SILSLAPREDAMETEEDQDEGQNLHQLETYIFRRHVTKWLHSLLAQGRRV
DHEQDWAEIFIRLAEILASASLEPPSIFLPILLLESGLADIYLWDSAATE
PVLRAHMWRYLQAVVHALEEDRSLQAAFDVKMFLARSGPLLHAILSAGVV
SGENKTIRGPVPGRASFAASRYLSGAPVRTSMPSDAPFQLLFFKSWEDEV
DGDAFHSESQVDIEIIQNLSRIVGKQLEIIAISSSWTDAYLLSRLISVFE
AAFTREKGTFTPGQVNERAFGRVVLPKEQTRSFDSPDDLKMGMEVWYRDR
HMPASIADSAPDRAWMRGNIVGIHRDDIEKYFTVKKIDGGETQMEFERLR
RAKPMDISGLVAGVCEGLPDLQFASAASISASAMFQKTSKQLSDVCGLLM
SILTPYLECAATTCSKVVLAWSLGEVLRGLQAIISPLHSDAVLRSEVDVW
MQKMQNKWFGIAESALEQAEKERATPESQWAVVTSSLYLLAGFPSLSMAR
ASILWSALIRIGLVTHASHGKSKENLALSSGNGTKSRVSVIPVNMFEMVQ
VATLFWTVGLSKTCREQVACRQALEEMWTNSAVGTCMTESPSAFLAAVDV
GLQTVLETGGLDLLPATKASLFRLALHGFTTTTKIKQSTAQTTVMSALRY
EICIRCRLLAVMLIPFDNCDLEWTTQIYEMKSSSGGLELNMTLWSTDVDT
LLQILESDGYPISSSFHMGAFHLLRPYLRSVTEMDDDSDDGDVSTFADFL
PLLENERAKTVANDASERKDMLRDVRIVARRLMPRFHRMLSLWVAPLDAE
LVHSQILEPHPTQRLACLLKWEGLLEMLGGDEGEDGMPTESLNGYRQGLF
QAIMTWLLFLEHVEAVALSPSLRDAYSTYVSLLDSLPVLLLACFRILGRR
VGSSADLVSSRYDLQDLWATSHKLESGTGSSATNGHDIRRLVAYVVVRTI
VTFPALVRKWWSSDSERWLTSSVFKFVEEYASGRIVQREIDLIHAKSRGY
ECPWGGGEDEIAVRGSTITREVTAHYLKDDCTLEILLRLPLAYPLRNVEV
ECTRSLGVSADKLNRWQLQIITLLSMRDGSIVDAVALWVKNLQREFEGMG
PCPICMSIIEARNLSLPERECRTCHNRFHNSCILKWFATSGKNRCVLCQQ
PTIG
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Synonyms
Publications