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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100021g58.8736.mrna |
Orig protein id | gnl|cribi|Naga_100021g58.8736 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002464.1 | supercontig | CM002464.1:582786..584198 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4882 ID=rna4882|Name=rna4882|organism=Nannochloropsis gaditana|type=mRNA|length=7076bp AAGCAGGTATTGTCATTTTATGATAGACGACAGCTCGGACGACGAAGGGT CGCGGCGGGTCCACGAAGAGGAAAGGTCAGTGGAGGCCCCACGTGGGACA GGACATGCCAAGCAAGTAGGTGCCGTCACCACAAACGGGTCATCGAAACC GAAAGCCTTGAGTATGGCGTCCGAACTGTTCGATGACGAATTGGAACATT TTAAAGGAGGGAACATTGCGTCCGACAGTCCGACCTCCCATTCGAAAGCT GCTGTGGCCTCTCCAACCTGCCGGAGCACGTGGGGAAGCGACATCAAAAA ATCTTCTCCGACTTCACGGAACCGAATGGAGGGGTCCGCTGGCAAGGAAG TTGATGATCGGGATTCGGAAGCGGGGAAAAACGAAGAAACGCAGCGCCTT GTCTCCGCCAAAGGTGCTGTTATCTCAGAGAATGGACAAGCTCGTGGGAG TTATCACTCTGCGACCCAAACAGTGAAGCGTGTTGCGAGTGATAGGAGCA ACAGAAATATCACCCCAGAGAGTATTTCACCAGAAGATTTTCAGGCGTGT AAAAAGATGAAAAAGCAGATGAAAGCGGAAAAAGATGTATCGCCTATCAT CCAGGATACTGTGAAGTCGAAAGCCAACAGAAAGTCATCGCCGGTCAACG GATCTAAACATAATGATGATGCTGCAGGTGCACCCTCTCAAGTCTGTGGC GTGAAAAAAAGTTTAGCCGCCCGCAAGAGGAAGAAGGCTACTGTAGCCCC CGAAATGGAGAAGGAAATTCGAAAAATGGTGCGCCTGGAGGTTCAGAAGA AGCGGAGCGATGCGAAGAACAAGGTTTTGAATAAGTTTAAAAAAGAGCTC CCCTGGCTTCGCGAGCGCTCAATATTTTCACAGCCAGCTACAAATGATGA GGCGGACAGAGTCAAAGATATCGACTTGCCCCGACTCACGCCTCCTTCGC CGTCGACGCCTTCTGCGCTTTCGGCGTTGCCAGGATTGCAACGAGCCAAA CTCATATCGTGCAGCAACTTCATCTACACTTTTGCGCGGCCTCTAGGCTT GCTGGCAGTCCCGACATTACCCGAGCTGGCTCAGGCGCTCCTGGCCCTGG ACCAGCCGGAGGAGGCGGGATGCCCACTTGCGGAGGCGGAGGGCCGCAAG AAGGAGGCGGCGCGGCTGATCGAAGACTTGTGCATAGCCTTGGTGCGGGC CGTGACTCCTGACGTCGAATATGTGTTGGGGCTCAAGAGCGGCCATACGG GTGACCTGATGGAAGAAGTCTGCTCAAGCAAGAGTGGCTTGATAATGCCG TTGAACAAATTGACGTGGAAGGAGATAGCACGCCTGAGCTTGGTGATGTT CATATATTCCTACCTCGGATTCTCAGACAAGGACATCGCAGAATGTATGA GAGGTCGCATAAATCCACGCCGTAACAAGGTGACTCTCAAACTTCTTAAA GCTCGTCTGGAACGCCGCGCAGCATTGGCGGTTGGGAAACGCTCGTTAAA GTCGTCAAGCAAGGATGGGTTTGACGCGAATAATGCGGCGGAAAATACGA TTTATTCATCCACGAGAGAAGGATATCAGGAGGTAGGAGATACAGAGAAT GGTCATGTTGGGATTCACAAAGACAGTGAAAGGCTTGGGCGGGAAGAGTC TGGGGATATCAGCATCTGCTCTACCTCATGCGGCGCACGAAAGGAAGCGG CGACCGCCCCGAACGGAGGTGGAAAGGACCATGCTCGGAAGGCTAATTCT TCAGACGTTCAATTCTCCGATCGCACTAAAACGAATGATGAAGATACACT TGCTGAAACTGCCGAAGACAAAAAGCCAAGTGTCACTCCGACCTCGGCAG GGGCAGAAAAAGAGAGACTTGAGGACACCAAGTCGGATGGAGAGGAGGAA AAAGCTGTTGATGAAGAAGATGAGGAAGAGGAAGAAGAAGAAGAGATGGC CGTAGAGATGTCTCGGGAGTTAGACGCCATTCTGGAAGAAGCTTGTCGGT CTGAGCAAGAGAGACGCGTTGCATGCCTTTTAAAACGTCTCCTTCAGCAT TCATGCTCCGAAAGGGTCGGTACTGAGGGGACGGAGGACCCTGATATTGA AAGCAGTCTGTCCGATTACGTTCTGAATGTGTGGGAGCCGCTTACCGTGG CAACCTTGATTCTCAAATTGAAGAGAGGGAGTTATTCTGCGGATGGTACT GAGGCTGGGGGATTGCTGGAGCTCGTGCAGGACGTGGAATTACTTTGCCG GAATTCATGGGCTTGCAACATTGAGGATTCTGAAGCCTGGGGAGCCGCAG AGAAATTTCATGCAATATTTGATCGTCTTTTACAAGCTTGGGTTTTGGAG CAGGCGCCTGAAAAGCGTCTCTCCGTGGATGAGATGCGCGGTCTCTGTCA GGATTTGGTGGAGCCTTGCTCAGCCTGCCGTCAACCTCTCTCTCGCCACA CCGCCAAAGTTATCTGCTGCCGCTGCGCACTTACGTTACACCCAGATTGC CACCGGTCCTTAACCTATCAAGACGAAAATCGCGCAGATGTGGGGGTAGA TATAGAGACAGATCTGTGGCACTGCACGGAATGCCTTGATTTTCGGGTGC GTCGTGAGGCCTATCCTGCCTTGGGGTTCGACGAGGAAGATAAACAGGGA GATCTTCTTCCTCAGGATTACGTGGAGGCGACAGATCACTTAAGCGCACA ATCCCGAGATATGCTGCTGTGGCTCCGCATGGTAGTCGGGGAGTGGGGGC CCGGGATGTCCTTCCCGCCGTTGTTAGACGTGACAGTGAGCCGGACGGCC CTCGGAAAGATCAAGGCTGATCCTGATTTGCTAGGGATATGGGCAGCTCT TGCGCTGCTAGGGGGGCGGGTTTCAGACGCTCACAAAGAAATCGACGCGT GTAAAAAGGCTACGGAAATGACAGAGGCGGGACACCAGCTCTTGATACTG GATTCACTTTGCCAAGCTGCCTCTACGCATTCAGGCATAATTAGGTCGTT TTTGGAAAGGCAAGATCAAAAGCTGGCAGCGTTACGTAAGCGGCCACCTA AGGAAGAGGAAGAATTACGAAAAGAGCTGCAAGACATCGGAGGTGATGCG GCGGTTTTGGCGTGGAAAGATCCTATGACAGAAGAGTACATGGCGGAGGA AGCAGCAGCAGCTGCTGTTGAGGAGGGCGAAGAGGGAGACGACGAGGATG GCGAGAACGGGGAAGACCAAGGTGAAGAGGAGACAGCCGTCTGTTGTGAA TGCAAGGCTACCACAAAGGACGTTGATGATTCTCAAGTTGTCCTCTGTGA AAGCTGCCCCACAGAGATCCACCTTAGGTGCCTAAATCCAAATTTGACTG AGGCGCCAGAAAAAGAATGGTTCTGTCGCGTATGCAAGGCCAAAAAGAGG GAGATTAATAAGCAACGTCAGCGCCAACGATTTGTGGTGAAGGCTGTTGA CGTGGACGATCTTCTTGAAGGCCAACGCTTGGCTATCGAGAATGCGCTGT TGGAAGATTTCGTGGAGGAGAAAATCCAGGAGCGCCTGACGTCAGATGAG AAAAAGAAAAAAGAGAAAAAGACAGTGGGGTCATCTGGAACGCAAGAAGC TGCTTTTGTGCTTCCAGGTGGCTCCGGCGTGTTCAAGCAAGGTGAGGAGC AGAGGAGAAGTGCTGGGGATGCAGCGAAAGTAAAGGAGCAAGTGCAAGAG AAAGGGAGCTTCATTTCCACAAGCTCAGCGACCCCTTCGAGCACTTCTGA AGGTTCATTACGTATTCGCAAAGCCATGCGGCTCAAATGTGAGTACTGCG GTTACGGGGAGATGGAGGTGTGCAGTCCGTTGGTGCTCGGCCAAACGCTT GCGGAGACGGAACAGTACGTGGCATTGGAGCCAGCGAAAGACCCATGGAT CTCAGAGAACTTGCGAAAGCGAAACCCAAACAGAGAATTAGAGGTGACAA AGAAATCGAAATCTTCTTCCGAGTCATCAGATGGAAAAGGAGTGGCGGAC ATTGTGACAAGTGAGAGCGTCTCACGTGGAAAAAATGAGCAGAGTTTTTT TGCGGAGAAAATTGGCCAAAAACAGGGGCACGATGGAGGTGACGGAGAAA GTATGTCACAGTCAGGTCAACTTAATGCAGCCAGGGCTGCCGATTTGTCC ACAATATCCGCCCCACCCGCGGTGGCTCCCTATTTTCCGCGGATAGACAC TGCGGAAAGTCGTCGATTTCCTTTCTCAGCGCATTGCCCCATCGTTCACG AACGTTGTGCGATTCAAATGCTGGCATTCCGCGCGCGTGCTTTACACGAT CAGAAGCTCCAGGGACAAAGCATTGCAGCAAGTGACGACCAAGTGGCGTG TCAGCAAGGCACTGAGGGACACGGAGTCGACAAAAATAAAAAAAATGCTG TACAACAAATGAATAAGAAGGACCCAAGGGCCGTTATAGAAGCAGCGTTG AGAATAAGTGGAACACGCACCTACTCCCTAGGTCAAGACCGCCACGGTCG TTGCTATTGGAAGATTCCTGGAGACGAAATGCGCCTATACGTGTGGGTTC GGCCAGAGGAAGGCGACGCGCAGGTGAAAGGGACGGATCCACAGCTGCCT TTGCAGGGGGGGGCAGAAGGGATGGCTTCTGTTGGGCCTGGAACTTGGCT CTGTTATCAGGACAGCGAAGACATTCGTCGTCTTGCTGATTATCTGGACA CGCGTCACTCCAAAGAAGGGCGCCTTCGAGAAGCAATTGAAGCTGAGTTG CTAGGTGAGCCCAAGGTTAGGGTTCCGAGGGATGATTCGATGTTTGTGCG AAACCCCTCTGGAGACTCTGGAGGCCCAAAACTGGACGGTTTGGAAGAGG GGCTTGTCGAAGGCGCAGGATTCGATGACGATGCCAAGACCGTATCAACA GATGGTGTAGAGGAAGGAGGTGGAGAGCAGGCAATGGAGACGAAAAAAGT CTCGAGGCCGGTCGCTTTGAAATTTTGGGAAGAGAAAAACCAATCTCCGG TTCCTTCGGAGGTATTGGACATAGAAGTCGACCCTGATATTTGGGGTGAT TCGTTGGAGCGCAAAGCGGCCGTGCGAAAAACTCGCAAGTACCATGCAGT TGTTCTGGTGGACGCGGAAGATAAGGTCTGGGAGGGTCGAAATCTTGGGG TGAGATTCCAAATTTTCAAGGGTGGGGAGGAGGTTGAGGAGTCTAGCACC CCGCGGGCGCACAAGGACCATATTTTTTGGTTCAACGTGTACGAATTTCT TCTGCCTGGTTTATACACTTTGCGCTACACGGTGGATACGTTCAGCCGGG AAATCAAGCCACTTTGTCTACGAGTTGAAGTGCGGGCACGGCGAGCGGCG ACTTCCGTGCGATCGGTTCTCAACAGCCACTTGAGCTTTTTGAATATTTC ACGGGGCGGTCGTTACAGCTTACGGCAGTCGGTTGAACTAGACATCCCAG AAGATGCTGATGAGGTAGTAGGTTTGCGCATTGCCTTGCTTCAGCTCAAA GAAACCTTGCCAAATGGAGCGCTTCTCGAGAGCCCTGAGGACTTGGGTGG CAGCATTGCTCATTTGGGCGGTGGAGGCAGTACTAATATCCATGCGGGTG ACGGAGAGGTAGGGCCTGTTCGAGCGCCTGTTTGCTATTGGACGGAGGCG CTTCAAGCACAGTGGATAAACCATTTGATGGAGGCAGAGACACCCCACGA GGTAATGGAGGGGCTTCTGCTTCTGGAATCATGCTTGCATCCGGAATGGC TCAAGCCTTGGTTCCATCCTCTCCGCCGATCTTATGCTGCAACCTCTTCC CATTTGTTGCGCTTGGGTACTACTGCCGCGGCAGCCGCATTTCATCTCTT CATTTTGGACAAAGCAATCTTGTACGACAAAGAAAGAAAGGTGCCTCGTA AAAGTCGAGGCCAGTCAGCCAGAAGCAGAGGGTTCCATTCCACTCAACGC TCTGTCTTGGAAGGAGAAAGTGATGAAGAAGACGATGATGAAGAAGAGAC CGAGAGCGAGGAGGATTGTGACTCGGACGACAACGGCGGCCGTAAGCGTC TGAGGTCCCGCAAACACAAAAAACGGTTGGCCACAGGTTCCTCATCTTCT CATGTCCGTGGCGTCAAACACCCACAACGGTCATCATTTCGTAAACGGGC TGTTGTCTCGTACAAAGAAGCGGGAGACAACGACATATTCGACGAGGAGT CTGACGAAGGCTCGTCTATTTCAACGAGAGAGTCAGGAGCCCAGAGCAAT GGAGGTAGCAGGACCAGGCCCAGAACAGGCGCCGTGTTGCCAATTGCGTC TGATGATGAATTTTCGAAAGAGTGTTTGGCCTTGTTGCGGCAGCTCAAAA GTCATCCCTCGGCAGGACCTTTTATAGAAGACGTCGGTGACAATGTTCCA GGGTACAGTACCATCGTACCTTTTCCAGTGAGTTTGACAACCTTAGAAGC GCGAGTCAGGCGTCAAGTGTATGGTACTTCTTTGGAGAAATTTTCGGATG ATGTGGGGCGCTTGTGGGAAAACAGCGTCCTCTACAATGGGGAAGATCAC GCGGTGACACGAATGGCGCTGCAACTCAAGGTCCGTTTTGAGGCATGGCA CCGCGATATGAAGCCACGACTAAGGGCTTAAGACAGAGCAAGCGAATTCG AGTCGCTGGTACAGTGATACGTTCGAGAGAGAGAATGATTCCAAATAGGC TGAGGCGGCTCTTTCGATTGAGGGAGGATGCGTGGAAGTGACGAGCAATT GCTCCAGCAGAGAATAGGCGAACAGCGGCGAGTGGCCGTGTGGTGGAGTA ATTGTCTTAATAGAAAAGCGTGAACGCCAAAAGCAATTGAACGTGTAGCG ACAGAAAACCTCTTTGTGTACGTAGCTGGCGGCGTAGCTTTGTTTATGCT TCTCCCTCGGCGATTCTTTCATATCACGAAGACGTCAGGGGTACTTTTGA GGCTCACGTGAATTCTCAACAGGAACCTTGGCCAGCATGAAGCTCAGATC AGGGAGATATATCTCCGAAAGCACGGCTGTAGCCTTTTCAGAAAGGGTTT CATAGCCAAGCATCAAATTCTCTCGG back to topprotein sequence of rna4882 >rna4882-protein ID=rna4882-protein|Name=rna4882|organism=Nannochloropsis gaditana|type=polypeptide|length=470bp MVEEEGNKPQSPGSAHEEPWTTQSTLSAFDSLQVTDNEVNDASLEAMQCR QSSGEQARIGAETYEPLPMRIGEPGLAHISTVVETDAELQKEIARARKVT ANVNKKRIGRSVQPIVAAEEDECQPHGHHDAKAARQYHSLTDSKPQRALG PCDESIGVRRNFSTSRRPLFDSFFEEGEPNDDFGDFAGPVVLSDDYTSIR QDPKPAISGNSFESCLSSQRSSEKRAKSYKSSCRSFFHASGDLTPLTMAA NKHQAHRAIHELEAVDINGLFALNQMKWKNARTCFWFDAVLCKILHSQAR CSFHCLPFTRLSEKANLHENVESMNKEEPGEILPIVDVASAQPRTLAPGG SLSRKHAPVTERMRHEGDKFFREKQRDFEKNMQDQVMDDYRGGTRIVEEQ EIAGDCVECENETREEPFHSKHTSRENLMLGYETLSEKATAVLSEIYLPD LSFMLAKVPVENSREPQKYP back to topmRNA from alignment at CM002464.1:582786..584198- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4882 ID=rna4882|Name=rna4882|organism=Nannochloropsis gaditana|type=mRNA|length=1413bp|location=Sequence derived from alignment at CM002464.1:582786..584198- (Nannochloropsis gaditana) ATGGTTGAGGAGGAAGGAAACAAGCCTCAGAGTCCCGGATCTGCGCATGA
GGAACCGTGGACGACCCAGTCTACACTATCTGCATTTGATTCTTTGCAAG
TTACTGATAATGAAGTCAATGATGCTAGCTTGGAAGCTATGCAATGCCGT
CAATCTTCAGGAGAGCAGGCAAGGATCGGCGCTGAAACGTATGAGCCCCT
ACCAATGCGAATTGGGGAGCCGGGGTTAGCGCATATTTCAACCGTTGTCG
AGACGGATGCAGAGCTTCAAAAGGAAATTGCGAGGGCTCGAAAAGTAACA
GCGAATGTAAACAAGAAAAGAATTGGCAGGAGCGTCCAGCCAATTGTCGC
GGCTGAAGAGGATGAATGTCAACCCCATGGTCACCATGATGCAAAAGCTG
CCCGTCAGTACCATTCATTGACCGATTCAAAACCACAAAGAGCTTTGGGC
CCTTGTGATGAGTCAATTGGAGTAAGACGTAATTTTTCCACATCAAGACG
CCCTTTGTTCGATAGTTTCTTCGAAGAGGGGGAACCAAACGATGACTTCG
GCGATTTCGCTGGGCCAGTCGTTCTCTCAGATGACTATACGTCTATAAGG
CAGGACCCGAAGCCTGCCATATCGGGAAATTCCTTTGAAAGTTGTCTATC
CTCACAACGGAGCTCAGAAAAGCGTGCGAAGTCCTACAAATCTTCGTGTC
GATCTTTCTTTCATGCCTCTGGCGATTTGACGCCCTTGACGATGGCTGCC
AACAAACACCAGGCGCATCGCGCGATTCATGAACTCGAGGCAGTGGACAT
TAATGGACTGTTTGCATTAAATCAGATGAAGTGGAAGAATGCGAGAACGT
GCTTTTGGTTCGACGCTGTCTTGTGCAAGATTCTGCATTCGCAAGCCAGG
TGCTCTTTCCATTGTCTTCCTTTCACGCGGCTATCTGAAAAAGCTAATCT
TCATGAAAACGTGGAAAGCATGAATAAAGAAGAGCCGGGGGAAATTCTAC
CAATAGTAGATGTTGCGAGTGCTCAACCACGAACTTTAGCGCCAGGAGGT
TCATTATCACGTAAGCATGCACCGGTCACAGAGAGAATGAGACACGAGGG
CGATAAGTTCTTCAGAGAGAAGCAGAGAGATTTTGAAAAAAATATGCAAG
ACCAAGTTATGGATGATTATCGTGGCGGTACAAGGATCGTGGAAGAGCAA
GAAATCGCAGGGGACTGCGTTGAATGTGAGAACGAAACTCGAGAGGAGCC
CTTTCACTCGAAACATACATCCCGAGAGAATTTGATGCTTGGCTATGAAA
CCCTTTCTGAAAAGGCTACAGCCGTGCTTTCGGAGATATATCTCCCTGAT
CTGAGCTTCATGCTGGCCAAGGTTCCTGTTGAGAATTCACGTGAGCCTCA
AAAGTACCCCTGA back to topCoding sequence (CDS) from alignment at CM002464.1:582786..584198- >rna4882 ID=rna4882|Name=rna4882|organism=Nannochloropsis gaditana|type=CDS|length=1413bp|location=Sequence derived from alignment at CM002464.1:582786..584198- (Nannochloropsis gaditana) ATGGTTGAGGAGGAAGGAAACAAGCCTCAGAGTCCCGGATCTGCGCATGA GGAACCGTGGACGACCCAGTCTACACTATCTGCATTTGATTCTTTGCAAG TTACTGATAATGAAGTCAATGATGCTAGCTTGGAAGCTATGCAATGCCGT CAATCTTCAGGAGAGCAGGCAAGGATCGGCGCTGAAACGTATGAGCCCCT ACCAATGCGAATTGGGGAGCCGGGGTTAGCGCATATTTCAACCGTTGTCG AGACGGATGCAGAGCTTCAAAAGGAAATTGCGAGGGCTCGAAAAGTAACA GCGAATGTAAACAAGAAAAGAATTGGCAGGAGCGTCCAGCCAATTGTCGC GGCTGAAGAGGATGAATGTCAACCCCATGGTCACCATGATGCAAAAGCTG CCCGTCAGTACCATTCATTGACCGATTCAAAACCACAAAGAGCTTTGGGC CCTTGTGATGAGTCAATTGGAGTAAGACGTAATTTTTCCACATCAAGACG CCCTTTGTTCGATAGTTTCTTCGAAGAGGGGGAACCAAACGATGACTTCG GCGATTTCGCTGGGCCAGTCGTTCTCTCAGATGACTATACGTCTATAAGG CAGGACCCGAAGCCTGCCATATCGGGAAATTCCTTTGAAAGTTGTCTATC CTCACAACGGAGCTCAGAAAAGCGTGCGAAGTCCTACAAATCTTCGTGTC GATCTTTCTTTCATGCCTCTGGCGATTTGACGCCCTTGACGATGGCTGCC AACAAACACCAGGCGCATCGCGCGATTCATGAACTCGAGGCAGTGGACAT TAATGGACTGTTTGCATTAAATCAGATGAAGTGGAAGAATGCGAGAACGT GCTTTTGGTTCGACGCTGTCTTGTGCAAGATTCTGCATTCGCAAGCCAGG TGCTCTTTCCATTGTCTTCCTTTCACGCGGCTATCTGAAAAAGCTAATCT TCATGAAAACGTGGAAAGCATGAATAAAGAAGAGCCGGGGGAAATTCTAC CAATAGTAGATGTTGCGAGTGCTCAACCACGAACTTTAGCGCCAGGAGGT TCATTATCACGTAAGCATGCACCGGTCACAGAGAGAATGAGACACGAGGG CGATAAGTTCTTCAGAGAGAAGCAGAGAGATTTTGAAAAAAATATGCAAG ACCAAGTTATGGATGATTATCGTGGCGGTACAAGGATCGTGGAAGAGCAA GAAATCGCAGGGGACTGCGTTGAATGTGAGAACGAAACTCGAGAGGAGCC CTTTCACTCGAAACATACATCCCGAGAGAATTTGATGCTTGGCTATGAAA CCCTTTCTGAAAAGGCTACAGCCGTGCTTTCGGAGATATATCTCCCTGAT CTGAGCTTCATGCTGGCCAAGGTTCCTGTTGAGAATTCACGTGAGCCTCA AAAGTACCCCTGA back to top
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