Naga_100021g57, gene4715 (gene) Nannochloropsis gaditana

Overview
NameNaga_100021g57
Unique Namegene4715
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:575852..582927 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100021g57
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:575852..582927 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL007ngnoL007Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL006ngnoL006Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02280NO12G02280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4881rna4881-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4881rna4881Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4881

>rna4881-protein ID=rna4881-protein|Name=rna4881|organism=Nannochloropsis gaditana|type=polypeptide|length=2203bp
MIDDSSDDEGSRRVHEEERSVEAPRGTGHAKQVGAVTTNGSSKPKALSMA
SELFDDELEHFKGGNIASDSPTSHSKAAVASPTCRSTWGSDIKKSSPTSR
NRMEGSAGKEVDDRDSEAGKNEETQRLVSAKGAVISENGQARGSYHSATQ
TVKRVASDRSNRNITPESISPEDFQACKKMKKQMKAEKDVSPIIQDTVKS
KANRKSSPVNGSKHNDDAAGAPSQVCGVKKSLAARKRKKATVAPEMEKEI
RKMVRLEVQKKRSDAKNKVLNKFKKELPWLRERSIFSQPATNDEADRVKD
IDLPRLTPPSPSTPSALSALPGLQRAKLISCSNFIYTFARPLGLLAVPTL
PELAQALLALDQPEEAGCPLAEAEGRKKEAARLIEDLCIALVRAVTPDVE
YVLGLKSGHTGDLMEEVCSSKSGLIMPLNKLTWKEIARLSLVMFIYSYLG
FSDKDIAECMRGRINPRRNKVTLKLLKARLERRAALAVGKRSLKSSSKDG
FDANNAAENTIYSSTREGYQEVGDTENGHVGIHKDSERLGREESGDISIC
STSCGARKEAATAPNGGGKDHARKANSSDVQFSDRTKTNDEDTLAETAED
KKPSVTPTSAGAEKERLEDTKSDGEEEKAVDEEDEEEEEEEEMAVEMSRE
LDAILEEACRSEQERRVACLLKRLLQHSCSERVGTEGTEDPDIESSLSDY
VLNVWEPLTVATLILKLKRGSYSADGTEAGGLLELVQDVELLCRNSWACN
IEDSEAWGAAEKFHAIFDRLLQAWVLEQAPEKRLSVDEMRGLCQDLVEPC
SACRQPLSRHTAKVICCRCALTLHPDCHRSLTYQDENRADVGVDIETDLW
HCTECLDFRVRREAYPALGFDEEDKQGDLLPQDYVEATDHLSAQSRDMLL
WLRMVVGEWGPGMSFPPLLDVTVSRTALGKIKADPDLLGIWAALALLGGR
VSDAHKEIDACKKATEMTEAGHQLLILDSLCQAASTHSGIIRSFLERQDQ
KLAALRKRPPKEEEELRKELQDIGGDAAVLAWKDPMTEEYMAEEAAAAAV
EEGEEGDDEDGENGEDQGEEETAVCCECKATTKDVDDSQVVLCESCPTEI
HLRCLNPNLTEAPEKEWFCRVCKAKKREINKQRQRQRFVVKAVDVDDLLE
GQRLAIENALLEDFVEEKIQERLTSDEKKKKEKKTVGSSGTQEAAFVLPG
GSGVFKQGEEQRRSAGDAAKVKEQVQEKGSFISTSSATPSSTSEGSLRIR
KAMRLKCEYCGYGEMEVCSPLVLGQTLAETEQYVALEPAKDPWISENLRK
RNPNRELEVTKKSKSSSESSDGKGVADIVTSESVSRGKNEQSFFAEKIGQ
KQGHDGGDGESMSQSGQLNAARAADLSTISAPPAVAPYFPRIDTAESRRF
PFSAHCPIVHERCAIQMLAFRARALHDQKLQGQSIAASDDQVACQQGTEG
HGVDKNKKNAVQQMNKKDPRAVIEAALRISGTRTYSLGQDRHGRCYWKIP
GDEMRLYVWVRPEEGDAQVKGTDPQLPLQGGAEGMASVGPGTWLCYQDSE
DIRRLADYLDTRHSKEGRLREAIEAELLGEPKVRVPRDDSMFVRNPSGDS
GGPKLDGLEEGLVEGAGFDDDAKTVSTDGVEEGGGEQAMETKKVSRPVAL
KFWEEKNQSPVPSEVLDIEVDPDIWGDSLERKAAVRKTRKYHAVVLVDAE
DKVWEGRNLGVRFQIFKGGEEVEESSTPRAHKDHIFWFNVYEFLLPGLYT
LRYTVDTFSREIKPLCLRVEVRARRAATSVRSVLNSHLSFLNISRGGRYS
LRQSVELDIPEDADEVVGLRIALLQLKETLPNGALLESPEDLGGSIAHLG
GGGSTNIHAGDGEVGPVRAPVCYWTEALQAQWINHLMEAETPHEVMEGLL
LLESCLHPEWLKPWFHPLRRSYAATSSHLLRLGTTAAAAAFHLFILDKAI
LYDKERKVPRKSRGQSARSRGFHSTQRSVLEGESDEEDDDEEETESEEDC
DSDDNGGRKRLRSRKHKKRLATGSSSSHVRGVKHPQRSSFRKRAVVSYKE
AGDNDIFDEESDEGSSISTRESGAQSNGGSRTRPRTGAVLPIASDDEFSK
ECLALLRQLKSHPSAGPFIEDVGDNVPGYSTIVPFPVSLTTLEARVRRQV
YGTSLEKFSDDVGRLWENSVLYNGEDHAVTRMALQLKVRFEAWHRDMKPR
LRA
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Synonyms
Publications