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Properties
Property Name | Value |
Product | dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit |
Orig transcript id | gnl|cribi|Naga_100021g27.8795.mrna |
Orig protein id | gnl|cribi|Naga_100021g27.8795 |
Gene | RPN1 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002464.1 | supercontig | CM002464.1:506768..508363 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4855 ID=rna4855|Name=rna4855|organism=Nannochloropsis gaditana|type=mRNA|length=2577bp ATGTTGCCCATCCCGCTGAAGAGCAGCACGGGCGTGAATTTCAACCCTCT GAGGGTGTACGTGTCGAACGAATACTCAAAGGAAGAGGCTGAGGCCGCCG ATGGGGACTTTAAGGCTCTGGAGCGCATGAGAAGCATGGCCCTGCAAGCT CGCGCTGCCACAGAGGCCTCGGTCAGAACTCTCCAAGCCTATTACACTCA AGTAGACCGCCTCCAGGGCATCTTCCCAGTCCACGCGGACCATGTCCGGG TGGCCTTCACCTGGCACGACGCCTTCCGCCCGACCAAGAAGTCCGCCGAG ATGGACTTCAACTTCGAGCTCGCCGGCGTGCTCTTCAACATGGGCGCCGT CAGGAGCAACATTGCTGCTTCAGTAGATCGTGCATCCGCTGAAGGGGTGA GACTCGCGTGCCGGGAGTTTCAACTGGCGGCTGGTCTCTTCAAGTGCCTT CGTGAGAAGGTGGTGGTCAACTTGAATTGCCATCTTCCCTCAGAGCTGAC GCAAGAGGGTTTGCTGATGGTGGAGAACATTATGCTAGCACAGGCGCAAG CCTGCTTCTACGAGAAGGCAATTGCCGACCAGAACAGCGCAAGCTCACGA ATGAAATCGTCCGTGGTGGCACGACTGGCAGCGCAGGCTGCAGAAACGTA CAGCGCGGCCCTCAAGTACGGCGAGTCGACTGCCATGGAGTCCGCGGGCC TGGACCGCTCGTGGCCCGTCACGCTCCGTTTCCAGCGAGACTTCTACTCT GCCGCGACTCAATACTATCAGGCGGAAGCGGTCAAGGAAAATGCCTTGGA AAACGGAAAGGGGTACGGGGAGGAAGTCGTCCGCCTCCGCCAGGCCCGCA GGTCTGTGGAGAGTGTGCTGGAGACCGCCATGCGGCAGCAAATGGGCCCC GCCATCATCGGGAAGGCCGAGCTCCTGAAGAGTAAGATCATCAGAAATCT AGCAGTAGCGGAAAAAGACAACGCGACAATTTATTTGGAGCCAATACCAG CAGAGGCGTCCTTGAAACCTGTCAGCAAAGTTTGCATGGTTAAAATATTG GAGCCGGAATTTCCTTTCGCTGCGACAGGCGACTCCCAGCCCCTTCTTTT TGTGAACATTTTGCCCAAGGCCGTCAAGGAAACCTTGACAAGGGTCGAGA GGCGATGCAGCAGCTTGGCTGCGGAGATGGAGCATGCGGGCCGTGAGGCC TCCAAGAGCGCCCGGCAGCAGCTGGCGAAGGTGGGATTGCCGGGTTCCCT CCAGGCGCATGAGAGCCCCGCGGGGCTCCCGGAGGCAACGTGGAAGAAGC TGCAAGGCTTAAGAGAAAAGCACTCAACTATACCAGACTTGCAGGGCCAG GTGGACGAGCTCCAAAGGGCGGCCGGCCAGGTTGCGGAGACGTTTTTGCA GATCGAGAAGACGCTCAAAGAGGAGGAATCGAAAAGTGAGGGCTTTCGTG CCAAATACGGTGCCGCCTGGGACGAGGTGGGGACATCCTCAGCTCAGCTG ATGGCAGACACATGGAAGGAGGTGCGACATTTCCAGACACTGTTCTCTGC GGCGCAGAAAAGCGACGAGTACCTGGCCTCCCGGCTGCAGTCCAACGAGC TCGAGGAAGTCTCTGCCCTGTTGAGAGCCTCGCGCGGGGATCTGGATTCA CGCCTGGTCCAGCCGGCCAGCTCTTCTTCCGCGGTGGTTGTAGATACGTC GCGCCTGTCCGCACTCATGTTGCGCTTGGCAAAGCTCTTGGATGAGAGAG ATTCCATCTTACAAAAGGCCAAGGCAGCACCGGAGGCAGTTTGCCTGAGG CTGAAGGGCCGCCTGGTGGCAGGCGATGCCGCAGATGAGGCCCTTCCTGA GGAGATGGCGTCGTTGGAGGCCCTAAAAAGCGAGTTGGCCGTCTCGACGG CGGGGCAAGAGCCCTTGCTGCGAGAGATTTTGCAAGAGAACGAGCGGTTT CAAGCAGGGCGAAAGGACGACCCGTCTCTGTTGGAGAGGGACCGACTGGT GCAGCAACTGGAAACAGGGGTATTGCAGTGTCACGAGCTTCATGCCCAGC TGGCAGAAGGCCGGGAGTTCTACGCTTCGGTGAGCAAACGTATACAGCAA CTGCTCCTGGTGGCGGAGGACCAAGTCTACACGCAAGACATCCAGCGTCG GGATTTTGAGATAGAGCTCGGACGGGCAGCGCATCGAAAGCAACAGGAGA GCGCGGACCAAGATGTTGCAAAAAAGCTTTTTGACCAATTGAACATACAG CATCAGGTAGAAGGCAATGCGAGCGCTCCTCCGCCCGGCCCCCCCCCACC TTACCAGCAGCAGTATGGAAACACTCAAAGCGGAGCTCCACCTCCGCCAC CTCCTAATCTCCCACCCCCTCCTGCATGTCTCTCAGCTCCGACACCTGCG GGTCCACCACCTTCTTATGAGCAAGCTCAGGCGTTGCCCGTCGCCCCACC TTACACTGATCAGGTCAAGATAGTACAGCTTACACAAATGGGGTTCCAAG AAACTGCCGCAAAGCAAGCATTGGCTCAGCATCAAGGAGACTTGCAAGCC GCTTTAAATGCGTTGCTGTCGGGATAA back to topprotein sequence of rna4855 >rna4855-protein ID=rna4855-protein|Name=rna4855|organism=Nannochloropsis gaditana|type=polypeptide|length=508bp MFSEMARLPVVHIGRSALGLLLLLCSCTFFAQAQKNIEVVRKIDLSSAVV RIDMTILANDLNGKYVVSFAKHLAPKLSFLQIAMGNQPLPWIRLPDAGDG LAHFQAEVPQGMTEAKLTVFGTLAGALVPVPAEIELTENQLVQYLDSHTF PSLYPTARQTTTFALGVSHIESFTKRDPYSRTGKDLVFGPITDIEGGAAA SLSPITIHYQNNAPFVKALQAIREIEVSHWGNVAFEDFVEVKHAGAALKG GFSRLDFQARGAPSAVRGLVAVLPLGARSIYYRDQIGNISTSVIQHGPDG VELNLQSRFPLVGGWKNQFYQGYSVPVQELLTVGPSSGGVRRFTLTVPFS VPFPEVWVEDLTVKVVLPEWAADVRVEIPFSVDEEHQTHRLTFLDSSLSG GRPVLILKKRNVVAEHMQPMVLSYSFPTRAMLLEPLYLVLAFFSFFLVCM IFARVDLRINADGGKKKSKTHNLKSSYSPSWEIAACGKVSKVEISRFAMI ECRWRLVQ back to topmRNA from alignment at CM002464.1:506768..508363- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4855 ID=rna4855|Name=rna4855|organism=Nannochloropsis gaditana|type=mRNA|length=1596bp|location=Sequence derived from alignment at CM002464.1:506768..508363- (Nannochloropsis gaditana) ATGTTTTCGGAGATGGCGCGGCTGCCCGTCGTTCATATCGGCAGGTCGGC
GCTTGGACTTCTTCTCCTTCTTTGTTCCTGCACGTTCTTCGCCCAGGCTC
AGAAAAACATAGAAGTTGTGCGCAAAATAGATTTGAGCTCAGCGGTTGTT
CGTATCGATATGACGATTTTGGCCAACGACTTGAATGGTAAATATGTCGT
TTCCTTTGCGAAACATTTGGCTCCCAAACTCTCTTTCCTTCAAATCGCAA
TGGGCAACCAGCCCCTTCCCTGGATTCGTTTGCCCGATGCCGGGGACGGG
CTGGCCCACTTCCAGGCGGAAGTGCCTCAGGGCATGACTGAAGCCAAGCT
CACTGTATTTGGTACGCTTGCTGGTGCCTTGGTGCCAGTGCCAGCCGAAA
TAGAATTGACTGAGAATCAGTTAGTACAGTATCTCGATAGCCATACGTTC
CCCTCCCTTTACCCTACGGCGCGGCAGACCACGACTTTCGCGCTGGGAGT
CTCACACATCGAAAGTTTTACTAAGCGCGACCCTTACTCGAGAACGGGCA
AAGATCTGGTGTTCGGGCCTATCACGGACATCGAGGGTGGAGCCGCAGCG
TCGCTTTCGCCGATCACGATCCATTACCAGAACAACGCCCCGTTTGTCAA
GGCTCTGCAGGCTATCCGGGAGATCGAGGTGTCGCACTGGGGCAATGTGG
CCTTTGAAGATTTCGTGGAGGTAAAGCACGCGGGCGCGGCTCTGAAGGGA
GGTTTCTCTCGGCTCGACTTCCAAGCCCGCGGAGCGCCATCCGCCGTACG
AGGCCTGGTGGCCGTGCTCCCCCTGGGCGCCCGCAGCATCTACTACCGCG
ACCAGATCGGGAACATCTCCACCTCTGTGATCCAGCACGGGCCGGACGGT
GTGGAATTGAACTTGCAGTCGCGCTTTCCGCTGGTGGGGGGCTGGAAGAA
TCAATTCTATCAGGGCTACAGCGTGCCGGTGCAGGAGCTCCTCACGGTCG
GCCCTTCGAGCGGTGGTGTGAGGCGCTTCACCCTCACAGTGCCATTTTCT
GTTCCCTTCCCGGAGGTCTGGGTGGAGGATCTGACGGTCAAGGTGGTGCT
GCCAGAGTGGGCGGCAGACGTGCGCGTGGAGATCCCCTTCTCAGTGGACG
AAGAGCACCAGACCCACCGACTTACGTTCTTGGACTCGTCCTTGAGCGGA
GGTCGTCCTGTACTGATTCTGAAAAAGAGAAACGTGGTCGCAGAGCACAT
GCAGCCCATGGTACTCTCCTATTCTTTCCCCACGCGCGCCATGCTCCTGG
AACCTCTGTATTTGGTCCTTGCCTTCTTCTCCTTCTTTCTCGTCTGCATG
ATTTTCGCGCGCGTCGATCTTCGCATTAACGCCGACGGGGGCAAAAAGAA
GAGCAAGACGCAGTGAAGAGGGAGTGAGCAGCACCCACCAAAAGTTTTCC
AGAAATAGCGCGGCCTCCTGCAGGACGGAAGCAACTTAAAAAGCAGCTAC
AGTCCGTCTTGGGAGATCGCTGCGTGCGGCAAAGTAAGCAAAGTTGAAAT
CTCACGTTTTGCAATGATTGAATGCAGATGGAGATTAGTTCAGTAA back to topCoding sequence (CDS) from alignment at CM002464.1:506768..508363- >rna4855 ID=rna4855|Name=rna4855|organism=Nannochloropsis gaditana|type=CDS|length=3054bp|location=Sequence derived from alignment at CM002464.1:506768..508363- (Nannochloropsis gaditana) CAACTTAAAAAGCAGCTACAGTCCGTCTTGGGAGATCGCTGCGTGCGGCA AAGTAAGCAAAGTTGAAATCTCACGTTTTGCAATGATTGAATGCAGATGG AGATTAGTTCAGTAAATGTTTTCGGAGATGGCGCGGCTGCCCGTCGTTCA TATCGGCAGGTCGGCGCTTGGACTTCTTCTCCTTCTTTGTTCCTGCACGT TCTTCGCCCAGGCTCAGAAAAACATAGAAGTTGTGCGCAAAATAGATTTG AGCTCAGCGGTTGTTCGTATCGATATGACGATTTTGGCCAACGACTTGAA TGGTAAATATGTCGTTTCCTTTGCGAAACATTTGGCTCCCAAACTCTCTT TCCTTCAAATCGCAATGGGCAACCAGCCCCTTCCCTGGATTCGTTTGCCC GATGCCGGGGACGGGCTGGCCCACTTCCAGGCGGAAGTGCCTCAGGGCAT GACTGAAGCCAAGCTCACTGTATTTGGTACGCTTGCTGGTGCCTTGGTGC CAGTGCCAGCCGAAATAGAATTGACTGAGAATCAGTTAGTACAGTATCTC GATAGCCATACGTTCCCCTCCCTTTACCCTACGGCGCGGCAGACCACGAC TTTCGCGCTGGGAGTCTCACACATCGAAAGTTTTACTAAGCGCGACCCTT ACTCGAGAACGGGCAAAGATCTGGTGTTCGGGCCTATCACGGACATCGAG GGTGGAGCCGCAGCGTCGCTTTCGCCGATCACGATCCATTACCAGAACAA CGCCCCGTTTGTCAAGGCTCTGCAGGCTATCCGGGAGATCGAGGTGTCGC ACTGGGGCAATGTGGCCTTTGAAGATTTCGTGGAGGTAAAGCACGCGGGC GCGGCTCTGAAGGGAGGTTTCTCTCGGCTCGACTTCCAAGCCCGCGGAGC GCCATCCGCCGTACGAGGCCTGGTGGCCGTGCTCCCCCTGGGCGCCCGCA GCATCTACTACCGCGACCAGATCGGGAACATCTCCACCTCTGTGATCCAG CACGGGCCGGACGGTGTGGAATTGAACTTGCAGTCGCGCTTTCCGCTGGT GGGGGGCTGGAAGAATCAATTCTATCAGGGCTACAGCGTGCCGGTGCAGG AGCTCCTCACGGTCGGCCCTTCGAGCGGTGGTGTGAGGCGCTTCACCCTC ACAGTGCCATTTTCTGTTCCCTTCCCGGAGGTCTGGGTGGAGGATCTGAC GGTCAAGGTGGTGCTGCCAGAGTGGGCGGCAGACGTGCGCGTGGAGATCC CCTTCTCAGTGGACGAAGAGCACCAGACCCACCGACTTACGTTCTTGGAC TCGTCCTTGAGCGGAGGTCGTCCTGTACTGATTCTGAAAAAGAGAAACGT GGTCGCAGAGCACATGCAGCCCATGGTACTCTCCTATTCTTTCCCCACGC GCGCCATGCTCCTGGAACCTCTGTATTTGGTCCTTGCCTTCTTCTCCTTC TTTCTCGTCTGCATGATTTTCGCGCGCGTCGATCTTCGCATTAACGCCGA CGGGGGCAAAAAGAAGAGCAAGACGCACAACTTAAAAAGCAGCTACAGTC CGTCTTGGGAGATCGCTGCGTGCGGCAAAGTAAGCAAAGTTGAAATCTCA CGTTTTGCAATGATTGAATGCAGATGGAGATTAGTTCAGTAAATGTTTTC GGAGATGGCGCGGCTGCCCGTCGTTCATATCGGCAGGTCGGCGCTTGGAC TTCTTCTCCTTCTTTGTTCCTGCACGTTCTTCGCCCAGGCTCAGAAAAAC ATAGAAGTTGTGCGCAAAATAGATTTGAGCTCAGCGGTTGTTCGTATCGA TATGACGATTTTGGCCAACGACTTGAATGGTAAATATGTCGTTTCCTTTG CGAAACATTTGGCTCCCAAACTCTCTTTCCTTCAAATCGCAATGGGCAAC CAGCCCCTTCCCTGGATTCGTTTGCCCGATGCCGGGGACGGGCTGGCCCA CTTCCAGGCGGAAGTGCCTCAGGGCATGACTGAAGCCAAGCTCACTGTAT TTGGTACGCTTGCTGGTGCCTTGGTGCCAGTGCCAGCCGAAATAGAATTG ACTGAGAATCAGTTAGTACAGTATCTCGATAGCCATACGTTCCCCTCCCT TTACCCTACGGCGCGGCAGACCACGACTTTCGCGCTGGGAGTCTCACACA TCGAAAGTTTTACTAAGCGCGACCCTTACTCGAGAACGGGCAAAGATCTG GTGTTCGGGCCTATCACGGACATCGAGGGTGGAGCCGCAGCGTCGCTTTC GCCGATCACGATCCATTACCAGAACAACGCCCCGTTTGTCAAGGCTCTGC AGGCTATCCGGGAGATCGAGGTGTCGCACTGGGGCAATGTGGCCTTTGAA GATTTCGTGGAGGTAAAGCACGCGGGCGCGGCTCTGAAGGGAGGTTTCTC TCGGCTCGACTTCCAAGCCCGCGGAGCGCCATCCGCCGTACGAGGCCTGG TGGCCGTGCTCCCCCTGGGCGCCCGCAGCATCTACTACCGCGACCAGATC GGGAACATCTCCACCTCTGTGATCCAGCACGGGCCGGACGGTGTGGAATT GAACTTGCAGTCGCGCTTTCCGCTGGTGGGGGGCTGGAAGAATCAATTCT ATCAGGGCTACAGCGTGCCGGTGCAGGAGCTCCTCACGGTCGGCCCTTCG AGCGGTGGTGTGAGGCGCTTCACCCTCACAGTGCCATTTTCTGTTCCCTT CCCGGAGGTCTGGGTGGAGGATCTGACGGTCAAGGTGGTGCTGCCAGAGT GGGCGGCAGACGTGCGCGTGGAGATCCCCTTCTCAGTGGACGAAGAGCAC CAGACCCACCGACTTACGTTCTTGGACTCGTCCTTGAGCGGAGGTCGTCC TGTACTGATTCTGAAAAAGAGAAACGTGGTCGCAGAGCACATGCAGCCCA TGGTACTCTCCTATTCTTTCCCCACGCGCGCCATGCTCCTGGAACCTCTG TATTTGGTCCTTGCCTTCTTCTCCTTCTTTCTCGTCTGCATGATTTTCGC GCGCGTCGATCTTCGCATTAACGCCGACGGGGGCAAAAAGAAGAGCAAGA CGCA back to top
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