EWM25878.1, cds4811 (CDS) Nannochloropsis gaditana

Overview
NameEWM25878.1
Unique Namecds4811
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:450069..450485 -
Alignment locationCM002464.1:449621..449911 -

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Properties
Property NameValue
Protein idEWM25878.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100054g33.5570.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:450069..450485 -
CM002464.1supercontigCM002464.1:449621..449911 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM25878.1 vs. NCBI_GenBank
Match: gi|553195249|ref|XP_005856111.1| (hypothetical protein NGA_0333100 [Nannochloropsis gaditana CCMP526] >gi|422292946|gb|EKU20247.1| hypothetical protein NGA_0333100 [Nannochloropsis gaditana CCMP526] >gi|585107746|gb|EWM25878.1| hypothetical protein Naga_100054g33 [Nannochloropsis gaditana])

HSP 1 Score: 481.485 bits (1238), Expect = 4.847e-172
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 
Query:    1 MGSLFSRITNPRRYREHYENEETSTPAGGSNSAAAATSPVAETVEEAAPFDYMPLPKERVATIKGIFGFGQWQGVSIIEWFFVLFYSMVGVIMFLSIVQAMTMGSAGLAILYMVLSPIFFVLLTMAARVFTELVISVLMVPHLLMKNQQELQRQIGILQQQQQSYLSSTQQQQQQQAGCPDLEAGHQDFTTVHLHSATGEGGREGPSSSNPSSSAVPSRRHVGENRGEEIGIAMA 235
            MGSLFSRITNPRRYREHYENEETSTPAGGSNSAAAATSPVAETVEEAAPFDYMPLPKERVATIKGIFGFGQWQGVSIIEWFFVLFYSMVGVIMFLSIVQAMTMGSAGLAILYMVLSPIFFVLLTMAARVFTELVISVLMVPHLLMKNQQELQRQIGILQQQQQSYLSSTQQQQQQQAGCPDLEAGHQDFTTVHLHSATGEGGREGPSSSNPSSSAVPSRRHVGENRGEEIGIAMA
Sbjct:    1 MGSLFSRITNPRRYREHYENEETSTPAGGSNSAAAATSPVAETVEEAAPFDYMPLPKERVATIKGIFGFGQWQGVSIIEWFFVLFYSMVGVIMFLSIVQAMTMGSAGLAILYMVLSPIFFVLLTMAARVFTELVISVLMVPHLLMKNQQELQRQIGILQQQQQSYLSSTQQQQQQQAGCPDLEAGHQDFTTVHLHSATGEGGREGPSSSNPSSSAVPSRRHVGENRGEEIGIAMA 235
The following BLAST results are available for this feature:
BLAST of EWM25878.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|553195249|ref|XP_005856111.1|4.847e-172100.00hypothetical protein NGA_0333100 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4823rna4823Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications