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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100054g33.5570.mrna |
| Orig protein id | gnl|cribi|Naga_100054g33.5570 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002464.1 | supercontig | CM002464.1:449428..450974 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4823 ID=rna4823|Name=rna4823|organism=Nannochloropsis gaditana|type=mRNA|length=621bp
ACTCGTACGCTCTCTTCTCTTCACCTTGTGCTTCTACAGTCTCACGCCTC
CAGTGCGACTATCACAGGCCAAAGAATGTGGAAGCGCGCTTCAACGATGA
ATAAGGCCATCGTGGTGACCAGGTGCGGCAAACTTCATATTTTCCCAGTG
TTTTTCCTGACTACCAGGCGTAGTGTCTCGCGCAGCATCAAGGCTTTTTC
CTCCTCATCTACTTCTGCCGGTCAGGTCGCGCCGGAGACGATACAAGTTG
ACTTCGGTGAAGCAACAGGTGCCCTTTTTGATCGCATTGAAAAGGGCGTG
GCAGGCATGCAAGAGCTCAACGACTTCTTTGTGGTAAATCGACAAAATAA
AGTCGAACTGGTGATTGACTTGGGTCCGGGCAAGGGTGCTTTCACCTTGC
AAAGAGACTGGGCTCACAATCAGCTGGTCTATCTCTCGCCAGTGTCCGGA
TGCAACAAGTACGAGTACGAGCAAGCCGGAAGGAGGTGGCTGAGCATTGC
CGAGGATAAACACGATCTGACAGGCATTTTGACGCGGGACTTGATCCGGA
TGTGTGTAGGCTGTCCAGAACTATAACGATCTTAAAACAAGAGGAAGCGA
AAGCGTTTTTAGTCGACATTC back to topprotein sequence of rna4823 >rna4823-protein ID=rna4823-protein|Name=rna4823|organism=Nannochloropsis gaditana|type=polypeptide|length=235bp
MGSLFSRITNPRRYREHYENEETSTPAGGSNSAAAATSPVAETVEEAAPF
DYMPLPKERVATIKGIFGFGQWQGVSIIEWFFVLFYSMVGVIMFLSIVQA
MTMGSAGLAILYMVLSPIFFVLLTMAARVFTELVISVLMVPHLLMKNQQE
LQRQIGILQQQQQSYLSSTQQQQQQQAGCPDLEAGHQDFTTVHLHSATGE
GGREGPSSSNPSSSAVPSRRHVGENRGEEIGIAMA back to topmRNA from alignment at CM002464.1:449428..450974- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4823 ID=rna4823|Name=rna4823|organism=Nannochloropsis gaditana|type=mRNA|length=1547bp|location=Sequence derived from alignment at CM002464.1:449428..450974- (Nannochloropsis gaditana)
TCTACCTTTTATCTTCGGACTGGCGACAAAGCGCTCGCAAGGATGCCGCA
GCTCTCGAATTTAGAGAGAGGTTGGTGGACATTATACCATCTTGTCGGAA
GAGAGAGACAGCAGGCAGCGTCTGGCTCGGATCAAGAAGGCCGGACTAAA
GGAGCTGTTCGAGTGGGAGGTTGCTCGTAAACATACAAGACGTCGCTCCT
CAACGTAAAAGCGTGAGACCCGGCCTTTATTATTGTTCGTGCACCACGCT
CTTGCCCTGGCGGATCTATATGATGCGCGTGTCTTGCAGCGTTTACCCAC
TTTCATGATGGACATGCATATTAAAAATGCGACGAACACTTCGCGTAATA
AGCCTTTCAATGCCCATGTCGTAGCCTTGATGAAGATGTGGGATTGGAAG
ATAGGGATAATTTGAAAACTTGCAGGAGCAATCGCAAGCAGCTCATCCTC
TTTCTCTTGTTGTTCCTTGTCATACCAGCCACGGACGCTATGGGATCTCT
CTTCTCTCGCATCACGAACCCTCGTCGCTACAGAGAGCACTACGAGAACG
AGGAGACCTCTACTCCTGCAGGAGGAAGCAACTCTGCTGCCGCTGCGACC
TCCCCGGTGGCGGAAACGGTGGAGGAAGCTGCACCATTCGATTATATGCC
TCTCCCTAAAGAGCGTGTGGCGACGATCAAGGGGATCTTTGGTTTCGGCC
AGTGGCAGGGCGTGTCCATTATTGAATGGTTCTTCGTACTCTTTTACAGT
ATGGTTGGAGTGATAATGTTCTTGTCGATTGTGCAGGCAATGACCATGGG
CTCAGCAGGCCTGGCAATTCTCTACATGGTGCTGTCGCCCATCTTTTTCG
TGCTCCTCACGATGGCCGCGCGGGTCTTCACTGAGCTTGTGATATCTGTC
CTGATGGTAGGTAGTGCGGAATGTTATCACGCGGGAGAATGGGTTGGTTG
CAGCAACGACCACGGAAACGCATATAAAGATAAAAGAATCGTGCATTGGA
TGCGCCTGATGCTGCAGGTCTGGTTGTGCGGCTTGATACTCCTCCTTCCT
TCCTCCCCCCCAGGTCCCCCACCTCCTCATGAAGAACCAGCAGGAGCTCC
AGCGGCAGATAGGCATCCTCCAACAGCAGCAGCAGTCCTACCTTTCATCA
ACCCAGCAGCAACAGCAGCAGCAAGCAGGCTGCCCGGACCTGGAGGCGGG
CCATCAGGACTTCACTACTGTGCACCTGCACTCCGCCACAGGGGAAGGAG
GGAGGGAGGGGCCCTCCAGCAGCAACCCCTCGTCATCGGCCGTCCCGTCG
CGTCGTCACGTGGGGGAGAATCGCGGCGAGGAGATTGGGATCGCTATGGC
CTAGATCGTCAAGGCGTCTCATTCATAAAAGATGTGTATACTCGAGGGCG
GAGGTAGACGCGGGCACGGGGCCAGGCGTGGGTGTGATACAGAGCGGGGC
GGAAGCTTCGCACTTCGGAAAAGACTAAGATGAACAAAGATATGCAACCA
ATTATGACAGAGTTTAAAAGCACACAACGCACGAATGTCGACTAAAA back to topCoding sequence (CDS) from alignment at CM002464.1:449428..450974- >rna4823 ID=rna4823|Name=rna4823|organism=Nannochloropsis gaditana|type=CDS|length=1416bp|location=Sequence derived from alignment at CM002464.1:449428..450974- (Nannochloropsis gaditana)
GTCCCCCACCTCCTCATGAAGAACCAGCAGGAGCTCCAGCGGCAGATAGG
CATCCTCCAACAGCAGCAGCAGTCCTACCTTTCATCAACCCAGCAGCAAC
AGCAGCAGCAAGCAGGCTGCCCGGACCTGGAGGCGGGCCATCAGGACTTC
ACTACTGTGCACCTGCACTCCGCCACAGGGGAAGGAGGGAGGGAGGGGCC
CTCCAGCAGCAACCCCTCGTCATCGGCCGTCCCGTCGCGTCGTCACGTGG
GGGAGAATCGCGGCGAGGAGATTGGGATCGCTATGGCCTAGATGGGATCT
CTCTTCTCTCGCATCACGAACCCTCGTCGCTACAGAGAGCACTACGAGAA
CGAGGAGACCTCTACTCCTGCAGGAGGAAGCAACTCTGCTGCCGCTGCGA
CCTCCCCGGTGGCGGAAACGGTGGAGGAAGCTGCACCATTCGATTATATG
CCTCTCCCTAAAGAGCGTGTGGCGACGATCAAGGGGATCTTTGGTTTCGG
CCAGTGGCAGGGCGTGTCCATTATTGAATGGTTCTTCGTACTCTTTTACA
GTATGGTTGGAGTGATAATGTTCTTGTCGATTGTGCAGGCAATGACCATG
GGCTCAGCAGGCCTGGCAATTCTCTACATGGTGCTGTCGCCCATCTTTTT
CGTGCTCCTCACGATGGCCGCGCGGGTCTTCACTGAGCTTGTGATATCTG
TCCTGATGGTCCCCCACCTCCTCATGAAGAACCAGCAGGAGCTCCAGCGG
CAGATAGGCATCCTCCAACAGCAGCAGCAGTCCTACCTTTCATCAACCCA
GCAGCAACAGCAGCAGCAAGCAGGCTGCCCGGACCTGGAGGCGGGCCATC
AGGACTTCACTACTGTGCACCTGCACTCCGCCACAGGGGAAGGAGGGAGG
GAGGGGCCCTCCAGCAGCAACCCCTCGTCATCGGCCGTCCCGTCGCGTCG
TCACGTGGGGGAGAATCGCGGCGAGGAGATTGGGATCGCTATGGCCTAGA
TGGGATCTCTCTTCTCTCGCATCACGAACCCTCGTCGCTACAGAGAGCAC
TACGAGAACGAGGAGACCTCTACTCCTGCAGGAGGAAGCAACTCTGCTGC
CGCTGCGACCTCCCCGGTGGCGGAAACGGTGGAGGAAGCTGCACCATTCG
ATTATATGCCTCTCCCTAAAGAGCGTGTGGCGACGATCAAGGGGATCTTT
GGTTTCGGCCAGTGGCAGGGCGTGTCCATTATTGAATGGTTCTTCGTACT
CTTTTACAGTATGGTTGGAGTGATAATGTTCTTGTCGATTGTGCAGGCAA
TGACCATGGGCTCAGCAGGCCTGGCAATTCTCTACATGGTGCTGTCGCCC
ATCTTTTTCGTGCTCCTCACGATGGCCGCGCGGGTCTTCACTGAGCTTGT
GATATCTGTCCTGATG back to top
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