EWM25889.1, cds4784 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25889.1 vs. NCBI_GenBank
Match: gi|585107757|gb|EWM25889.1| (hypothetical protein Naga_100054g2 [Nannochloropsis gaditana]) HSP 1 Score: 1316.21 bits (3405), Expect = 0.000e+0 Identity = 643/643 (100.00%), Postives = 643/643 (100.00%), Query Frame = 0 Query: 1 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEKQEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGEGAKDSSQSGVDAVNSLFSIVGEMWTEMSP 643 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEKQEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGEGAKDSSQSGVDAVNSLFSIVGEMWTEMSP Sbjct: 1 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEKQEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGEGAKDSSQSGVDAVNSLFSIVGEMWTEMSP 643
BLAST of EWM25889.1 vs. NCBI_GenBank
Match: gi|585107756|gb|EWM25888.1| (hypothetical protein Naga_100054g2 [Nannochloropsis gaditana]) HSP 1 Score: 1314.67 bits (3401), Expect = 0.000e+0 Identity = 643/643 (100.00%), Postives = 643/643 (100.00%), Query Frame = 0 Query: 1 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEKQEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGEGAKDSSQSGVDAVNSLFSIVGEMWTEMSP 643 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEKQEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGEGAKDSSQSGVDAVNSLFSIVGEMWTEMSP Sbjct: 75 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEKQEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYYLRRPPRDTRDGLEAGGRDENGEALEIVDEEDEVEMERIGGGSEGARKMTLYDGQELGVLPPCMTRGKCPHASGEGAKDSSQSGVDAVNSLFSIVGEMWTEMSP 717
BLAST of EWM25889.1 vs. NCBI_GenBank
Match: gi|585109295|gb|EWM27118.1| (hypothetical protein Naga_100046g25 [Nannochloropsis gaditana]) HSP 1 Score: 169.474 bits (428), Expect = 2.302e-41 Identity = 97/229 (42.36%), Postives = 129/229 (56.33%), Query Frame = 0 Query: 3 IRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGI--------VYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAE 223 + +G+E K+ + S PYARY S+Q+Y + +S SLRDVDI+P NGPNCY NLTAA G +QGGY + +T+ GD + NELRAL D SG F LFFRIY + PP + +G Y + EWGWA PP + KR + G++ +P C YRR+ G ++ +PP P+V APN N FLP + KFA+KDA Y+ S AE Sbjct: 167 MSKGDEFKLVAESFPYARYCSYQTYDLRTLMSHQSLRDVDIVPDANGPNCYANLTAAQEGLRQGGYTLYMTARGDQNYTNELRALPDSIESGQFDLFFRIYVEEALQGPPQAP--------WGHLPPYGKDLAFEWGWAPPPRLYAKRA--HLKDGEWREVPFCQYRRRKGFKLLAYLSEIWPAPSPPFAGHPAV-APNKANNVFLPKYTDRQGKFASKDANYVASVAE 384 HSP 2 Score: 142.124 bits (357), Expect = 5.651e-32 Identity = 90/246 (36.59%), Postives = 125/246 (50.81%), Query Frame = 0 Query: 296 SGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRD-FRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTCEKQEGEGTEPLHVLSNYLCCGPAAPEWCHDPRFVASKMRDFYPLVEYY 540 +G LWARVTG LPR SLY PP++AN +DYDVRYVSLS+V R++P+R + T+ D ITEHY + P DR F +W+ PPQ S P V +E + + WG F G + + G+LYRQ++++ QVVG A +A +G + G GP G GA +A +G P+ E ++ CC AP C P +V +M +YP VEY+ Sbjct: 390 NGSEAMLWARVTGTLPRVPGSLYTPPYVANATDYDVRYVSLSAVHRTIPFRNHATVADTQITEHYQKRLPPGVEWDRKFTIWVVPPQ----VESAYPRQVMDENPVIMKWGASLFGGGIVEYTGLLYRQVMARSQVVGLEQGALSA---SGVVNIVPEACQSGQVGP-----HGEGADAAMKAGDPL-----------EMEQ-------------FCCSTEAPMECFLPEYVRYRMGPYYPQVEYF 599
BLAST of EWM25889.1 vs. NCBI_GenBank
Match: gi|585105664|gb|EWM24273.1| (protein of unknown function DUF1214 [Nannochloropsis gaditana]) HSP 1 Score: 132.494 bits (332), Expect = 3.395e-29 Identity = 91/241 (37.76%), Postives = 124/241 (51.45%), Query Frame = 0 Query: 1 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLP-PMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRR--------KHGIV-----YNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWV 227 M++ GEE + S SLPY+R+FSFQ+YS+ S LRD +I+ S NGPN Y N++AA G KQGGY + +T G G+ NEL+ L + SG+F+L FRIY VG P PM+ A R PQ WGW PP V+V+R R+ G + +P C R+ K I+ D+ PP + P NF LP D++ F++ D + L S A P V Sbjct: 89 MFLNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIV-SQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYD--VGDFPHPMAPWAH--------LSRGDARQPQRWGWTPPPRVSVRRTMRQ---GSWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPH-DHL---FSSVDTRTLVSAAAIPAV 311 HSP 2 Score: 95.1301 bits (235), Expect = 6.103e-17 Identity = 55/126 (43.65%), Postives = 70/126 (55.56%), Query Frame = 0 Query: 301 ELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHY-LREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQIL 425 ++WARV +LPRT +SLY PPFIAN SDYDVRY+S +S R+ P ++TL D I +HY R GP D F LW+GP + P R E L + WG R P +LY Q+L Sbjct: 315 DVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGP------VNAPPPEQARLENALIMRWGEVAR------PALLYNQLL 428
BLAST of EWM25889.1 vs. NCBI_GenBank
Match: gi|585101524|gb|EWM21339.1| (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 89.3521 bits (220), Expect = 4.881e-15 Identity = 107/427 (25.06%), Postives = 169/427 (39.58%), Query Frame = 0 Query: 5 RGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLPPMSELADDMGECFGPR-GRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRRKHGIVYNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWVPEKSKGAGGWSFWKGQRSPVEEGREREENREGATKKETHRKPVARDKPSEDGEVEGEGRKRAPEAGRGSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLRE-FGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIP-FPGILYRQILSQG 428 + EE+ PY RYFSF Y S ++L D DI PS G N + ++ + G YE+ V+ G G+ NE+ AL D S Y +L FR+ + PR G + +EWG+ P V + L+ R G+++ + C + T VI +L FN + P K+ + C A +S + +++P+ R G + + + P E G+ ++ R+TG+LPRT L++ +A+ + YD RYVS +S Y Y+T+HD DI HY + FG W DR + L + +LA + G+ + + L R H+P P I+ R +L G Sbjct: 154 KEEEVYRIRGKFPYVRYFSFTVYD-ASLQSISTLHDTDIRPSS-GKNPFNDI--EVTEDNMGTYEIYVSKDGSKGYPNEMAALRPDSTSPYALLAFRL-------------------QLLDPRAGEDRSGKNREWGYVDMPLVEI--LNHR--NGEWDIIRRCSDE------FQARTEEVI-----ENLDLTFNTWWP-----------KNLQIGTEC-----------NATEFSLFDPEQNPII--------RRGVAVRNANENYIFWCMPKEIGK-------------------KDYIIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDW--DRMYNL-VATSDVNLAKKC---GLYNRAEDVLLQLTRSPTFTHLPHVPAIVMRHLLPGG 487
BLAST of EWM25889.1 vs. NCBI_GenBank
Match: gi|585102674|gb|EWM22223.1| (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana]) HSP 1 Score: 71.633 bits (174), Expect = 1.837e-9 Identity = 55/190 (28.95%), Postives = 86/190 (45.26%), Query Frame = 0 Query: 295 GSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVR----EEKGLFL-PWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGA 479 G G L A +TG LP + L+ PPF+A+F+ + RY+SLS+ ++P QTL D+DI + Y + +G +L + QY + A + L R +FL WG+ R + +P ++ R+ILSQ +G + + C +S+ GVGA T S A Sbjct: 258 GGGVQGNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLR-----NSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTAR---VSYPALVLREILSQSSRIGDTANNTQSIHNIKQAC---------------ESIAGVGAKCETSSFA 424
BLAST of EWM25889.1 vs. NCBI_GenBank
Match: gi|553186469|ref|XP_005854425.1| (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >gi|422294638|gb|EKU21938.1| hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 70.8626 bits (172), Expect = 4.156e-9 Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = 0 Query: 295 GSGEGRELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHYLREFGPAWLED-RSFKLWLGPPQYSLAARSHLPGIVR----EEKGLFL-PWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGA 479 G G L A +TG LP + L+ PPF+A+F+ + RY+SLS+ ++P QTL D+DI + Y + +G +L + R+ + QY + A + L R +FL WG+ R + +P ++ R+ILSQ +G + + C +S+ GVGA T S A Sbjct: 360 GGGVQGNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSR------QYKIVAAADLASAKRCGHLTRDAMFLSTWGQTAR---VSYPALVLREILSQSSRIGDTANNTQSIHNIKQAC---------------ESIAGVGAKCETSSFA 526 The following BLAST results are available for this feature:
BLAST of EWM25889.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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