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Properties
Property Name | Value |
Product | major facilitator superfamily |
Orig transcript id | gnl|cribi|Naga_100048g16.10272.mrna |
Orig protein id | gnl|cribi|Naga_100048g16.10272 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002464.1 | supercontig | CM002464.1:330682..333130 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4779 ID=rna4779|Name=rna4779|organism=Nannochloropsis gaditana|type=mRNA|length=1914bp TTTTCCAACAACGATACAGTCGAGGGCGCCGCAGCTTTCATTTTCAACCA GATTGAATAGATGGCTGACCATCTCCGCCGTGCTGATCGTTCTAAACAGA CGAAAAACTTCTATACGGTACTAGGGGTCGAGAAAGGCGCGTCAATAAAT CAAATCACTAAAGCATATCGGATCCTGGCCTTGCGCTATCATCCCGATCG CAACCTAAAGGATGCCCCGACGGGCGAAAAGTTTAAGGAAATTTCTACAG CGTATGCAATTTTATCGGATCCAAATAAACGGCGACGCTACGATTTGAGC GGAGGAGACACGTCAGAAATGTTTGACGACAGCACAGAGAGTCTGGATTT GGAAAATTTAAACAGCCTGCAAAAGGTTGTGTTTGCCATTATTACCAGAT TTGGTCCAAATTTTCAGACGCAAGTCAATGCGGAGACATTGATCAAGGCT AAGGATTTATGCAACGATGTGCGGGCCAAGAACCGGGGCAAGGAGAAGGG AAAGCGGGAGGAAGGGCAGCGGGTCGTCAATTTAAAGCCAGGCTTTTCCA TGGTCGGTAAAACAGTTGCGCAGCGAGGAAATTTTTATCGGCTGCAACTA TCGGAAGCAGACGCGGCGAACGGTGTCATTGTCAGCTGTTGCTCCTCCAG TCAAGATCGATTCAAGCTGATCTGTTTCGAAGCGGACGGCAGTGTCCGTT ACATGCAGGAAAGCAGCCCGCATCACGAGAAGAAAGACACCGTGGCAGAC CTGCTCTTGGTGCCCTTCCAGACAATCACCTCATACGGGACCAGCGAAAA TTATGAGATAAAGAAAACGGATCCCCTCCTCTTTTCCCGCCTCAATATCC TCACCCTGGAGGCTCGCTCCATTCAGGCTGGGGAGCATCTGCTCTGCGTG TACGGGGACAATTGGTACACGGGATCCTCTTACACGATCACCATCATGCG GGCTCATCTCGATCCCCTCCTGGTGCAAACGATGAGGGAAATGGACGACA AGCTCTACGCCAAAAAGGGCGAAATTGAGCTGCTCAAGGAGCAGTACGAT CGTGCCGAGGCTGCCTTCGAGGCCATTAAGGCCAAAGTGGACGAGGAGAG TAAGGTTACGGAGGCACTGGTGCAAGAGAGGGAAGCAGCCTACTCTCGGT TCATCACTTCATCGGTTCGAAATTATGGACCGCACCTCAGTGCAGGCCTT AAAGGTCCGCCGACATCCTCGACGGCTCAGGCGGCTCCCTCTCTTCCCTT GGCACAGGGCTCGCACATGGAGGCCCTGTCAGCTTCCACCTCGGGCGGGC TCCCGGTGGGGGTCTCTGAGACGAACAAAGACAGCAAGGAAGTGGTGTCT CCAGCAGCCCGAGCTTCCGCGGATCTAGGCGAAGGGAAGAATTGTAAATC AGCACCAGGAGCAGGCGTGACCAGAGCGGCAGAAAGATCAGGAAATAGTG ATAAATCTATCTCCGGCACTAGTCCAACGAAGAGGTCGTCTTTTTCCTTT CTCGCAGGTTTCAGACGGGGGGGAAGAGGAGGATCAATTGTGCAACAAGA AGAGTTGCAGGCCTCAAAGGCATAATCTCCAGTAAATGGCTATAGATGGA TAGGTTTCTGCGTATGTACACTGGTAACTAACATTGATTGACCGATCGAG AGACTCGTAATCCTACGGAGCATTTCGGAGACTACACGGCGATCTTGCTT TTGGCAAAAGTACTTCTGGGTAACAGACATTTGCTGTGATTTGTGTGACT TTTGCTTCTTTTTCAAACGTTTGCTTCCACGGGGTTCAAGTGATCGCCTT TTTCCCCTCTTCGTACAAAGCTTGGGCAGCGCGGTCGGAGAAACGAACCA TGTTCATCAGCGAAGTGGATCACTCACAAAATCATTACGACAGCATTGAA AAATGCGAAAATTC back to topprotein sequence of rna4779 >rna4779-protein ID=rna4779-protein|Name=rna4779|organism=Nannochloropsis gaditana|type=polypeptide|length=589bp MMIIPFLRTGPKAAILGGFLLHLVMGTLYTFGSLTVYLTSYLRVYDPTVT YNNTIVIYACTIAGQALLMFLGGKIELRVGPRAAAAIGSCCLVGAPLLSS MVTSLWAMTCTYGLLFGFGGGLTYTVPLVCGYRWEPERKGLVSGVILSGF GLSALVFNQIQSVLVNPHNLKPDVVYKNKRYFGPGPVTDAVPGLLVKLGL LYSLLCVTGTLLLQDPIYKKIEDGAEEEEEDKKERGCLSASSHYLDIVGA ESTALVAAGDGPAHDSRVHKRDAPCEVAGGSSPLRRRGWEEEGAMEISTL EYQRLREDREPVGEGGKGREGGRGGVAVGNGGHKNGVGEEVKGGGRDLAG KEPRLGGTQVDKGSDKDVNGERARPGAEEEEEVEVSPSELVCLPQAWHVS LSFTLGALSGLVTLATYKSIGISTFLDDHFMSAVVGSVSSVANALGRIFW GWMSDRAGAYRTLYILCLCQAGFLFAWGLTVGAWKSRWLFALCVAGVAFS HGGNFAIYPALIATLFGKTNSAPNFGLIFLFYGLASLVGLSVLPWLSPEL TPLCDVLGGIALTSAGSVWGLQAWYTPKLKAGGRHPLLR back to topmRNA from alignment at CM002464.1:330682..333130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4779 ID=rna4779|Name=rna4779|organism=Nannochloropsis gaditana|type=mRNA|length=2449bp|location=Sequence derived from alignment at CM002464.1:330682..333130+ (Nannochloropsis gaditana) CACCACAGCCAGCCGGAGGTTACTGCTTATCTTCTCCCGAATAGCCCCCT
CGGCGAGGTGCTTCATGATGATTATCCCCTTCCTACGCACGGGCCCCAAA
GCAGCAATTTTGGGAGGTTTCCTGCTCCATTTGGTCATGGGCACGTAAGT
GATGACTCGCTACTTCTCATTTACTGTGAGGACATTGTTGCCATTTTGGA
AAGGGATTTTTAATGCCAATTTATGGCTCCTTGGTCTGCACGGGATATTT
TGATGTTACCTTCTTCTGCAGCATTGCAATGGTGCAGGTGACTCacgcct
ccatcctttttGGAAAGAGCCAAATTGATGGACTtatctttcttctttcc
ttcgttTTTAACCTCACTAATGATACAGCAATTCTTTTCTATCTCTACAA
CTCCATACCATCATCTACAGGCTCTATACTTTCGGCTCCCTGACCGTGTA
TCTCACTTCCTACCTACGCGTTTATGATCCTACCGTTACCTACAACAACA
CCATCGTAATTTATGCGTGTACAATAGCTGGGCAAGCTCTTTTGATGTTT
CTTGGTGGAAAAATTGAACTTCGCGTGGGTCCTCGCGCGGCCGCTGCCAT
TGGTTCATGCTGCTTGGTCGGCGctcccttgctctcttcAATGGTGACGA
GCCTGTGGGCGATGACATGCACCTATGGGCTACTGTTTGGgtttggagga
ggcctgaCGTATACCGTGCCCCTCGTGTGCGGGTACCGGTGGGAGCCAGA
GCGCAAGGGACTGGTCAGCGGCGTGATTCTGAGCGGCTTCggcctctccg
ccttggTCTTCAATCAGATCCAGTCCGTCCTCGTCAATCCGCACAATTTG
AAGCCGGACGTGGTCTACAAGGTGTGTCTATGTGAAGATGGACAGCCCAT
GGCAAAGCCCAGTGTTTCTCCAGGGCTCCTGGCGCAGATTTATGAATTTG
CGCTTTTACACGTGTCCCGAATCGGTCTAAACTGAGCCATCTCTTCCACT
CTTGTGCCCCCCTTTTTAATTCAGAATAAGCGATACTTCGGGCCCGGCCC
TGTGACCGACGCGGTCCCGGGCTTGCTGGTAAAGCTCGGCCTCCTATACT
CCCTGCTCTGCGTCACCGGCACCCTTCTGTTGCAGGACCCTATCTACAAG
AAGatcgaggacggggcggaggaagaggaggaggacaagaaagagagagg
ctgtttgtccgcttcctcccactacCTGGACATTGTCGGGGCTGAGTCGA
CCGCCCTGGTGGCAGCCGGCGACGGGCCCGCTCACGACAGTCGTGTCCAC
AAGAGAGACGCCCCGTGCGAGGTAGCTGGGGGTTCCTCGCCGCTCCGACg
gcgtgggtgggaggaggaaggggctaTGGAAATCTCGACTCTGGAATACC
AGCGGTTgcgggaagacagggagccggtgggagagggagggaaggggagg
gaaggagggagaggaggagtcgCGGTAGGGAATGGAGGACATAAAAATGG
TGTCGGGGAAGAGgtaaagggaggagggagggacttggcagggaaggagc
cAAGGTTAGGAGGTACGCAGGTCGATAAGGGCTCAGACAAGGACGTAAAC
GGGGAAAGGGCCAGGccgggagcggaggaggaggaggaggtggaggtatC
ACCGTCGGAACTCGTCTGCCTGCCGCAAGCGTGGCACGTGTCCCTGTCGT
TCACCTTAGGGGCCTTGAGCGGGCTGGTAACCCTGGCCACCTACAAGAGT
ATCGGCATCTCCACCTTCCTGGACGACCACTTCATGTCCGCAGTTGTGGG
CAGCGTGTCCTCCGTGGCCAACGCCCTCGGGCGGATTTTTTGGGGCTGGA
TGAGCGACCGTGCGGGTGCTTATCGCACGCTCTACATCCTCTGCCTGTGT
CAGGCAGGCTTCCTTTTTGCCTGGGGCCTGACGGTGGGCGCGTGGAAGAG
CCGGTGGCTGTTTGCGCTCTGCGTCGCCGGGGTGGCCTTCTCCCACGGGG
GCAATTTTGCAATTTACCCGGCCCTGATCGCCACCCTCTTTGGGAAGACG
AACAGCGCTCCGAATTTTGGGCTGATCTTCTTGTTCTATGGCCTTGCCTC
CCTGGTCGGGCTCAGTGTCCTACCCTGGTTGTCTCCTGAGCTGACCCCAT
TGTGCGATGTGCTGGGAGGGATCGCACTGACCTCGGCGGGGTCCGTGTGG
GGGCTGCAGGCCTGGTACACACCCAAGCtgaaagcgggggggaggcatcC
GCTTTTGcgatgaaaggaggggggttgTGGACGTGttgggggaagagaag
cggaacgggggagggaggagccggggCTCTCCCTGGAAGACCCCCGGGCC
TTGTACATCAGTGAGACCGCTCGGCACCATCGATGATGACGGGTCTCGTG
TTACATAGGACAAGGAAAATAGCATATAGCACACCAAATGACCAAGACG back to topCoding sequence (CDS) from alignment at CM002464.1:330682..333130+ >rna4779 ID=rna4779|Name=rna4779|organism=Nannochloropsis gaditana|type=CDS|length=5310bp|location=Sequence derived from alignment at CM002464.1:330682..333130+ (Nannochloropsis gaditana) ATGATGATTATCCCCTTCCTACGCACGGGCCCCAAAGCAGCAATTTTGGG AGGTTTCCTGCTCCATTTGGTCATGGGCACGCTCTATACTTTCGGCTCCC TGACCGTGTATCTCACTTCCTACCTACGCGTTTATGATCCTACCGTTACC TACAACAACACCATCGTAATTTATGCGTGTACAATAGCTGGGCAAGCTCT TTTGATGTTTCTTGGTGGAAAAATTGAACTTCGCGTGGGTCCTCGCGCGG CCGCTGCCATTGGTTCATGCTGCTTGGTCGGCGctcccttgctctcttcA ATGGTGACGAGCCTGTGGGCGATGACATGCACCTATGGGCTACTGTTTGG gtttggaggaggcctgaCGTATACCGTGCCCCTCGTGTGCGGGTACCGGT GGGAGCCAGAGCGCAAGGGACTGGTCAGCGGCGTGATTCTGAGCGGCTTC ggcctctccgccttggTCTTCAATCAGATCCAGTCCGTCCTCGTCAATCC GCACAATTTGAAGCCGGACGTGGTCTACAAGAATAAGCGATACTTCGGGC CCGGCCCTGTGACCGACGCGGTCCCGGGCTTGCTGGTAAAGCTCGGCCTC CTATACTCCCTGCTCTGCGTCACCGGCACCCTTCTGTTGCAGGACCCTAT CTACAAGAAGatcgaggacggggcggaggaagaggaggaggacaagaaag agagaggctgtttgtccgcttcctcccactacCTGGACATTGTCGGGGCT GAGTCGACCGCCCTGGTGGCAGCCGGCGACGGGCCCGCTCACGACAGTCG TGTCCACAAGAGAGACGCCCCGTGCGAGGTAGCTGGGGGTTCCTCGCCGC TCCGACggcgtgggtgggaggaggaaggggctaTGGAAATCTCGACTCTG GAATACCAGCGGTTgcgggaagacagggagccggtgggagagggagggaa ggggagggaaggagggagaggaggagtcgCGGTAGGGAATGGAGGACATA AAAATGGTGTCGGGGAAGAGgtaaagggaggagggagggacttggcaggg aaggagccAAGGTTAGGAGGTACGCAGGTCGATAAGGGCTCAGACAAGGA CGTAAACGGGGAAAGGGCCAGGccgggagcggaggaggaggaggaggtgg aggtatCACCGTCGGAACTCGTCTGCCTGCCGCAAGCGTGGCACGTGTCC CTGTCGTTCACCTTAGGGGCCTTGAGCGGGCTGGTAACCCTGGCCACCTA CAAGAGTATCGGCATCTCCACCTTCCTGGACGACCACTTCATGTCCGCAG TTGTGGGCAGCGTGTCCTCCGTGGCCAACGCCCTCGGGCGGATTTTTTGG GGCTGGATGAGCGACCGTGCGGGTGCTTATCGCACGCTCTACATCCTCTG CCTGTGTCAGGCAGGCTTCCTTTTTGCCTGGGGCCTGACGGTGGGCGCGT GGAAGAGCCGGTGGCTGTTTGCGCTCTGCGTCGCCGGGGTGGCCTTCTCC CACGGGGGCAATTTTGCAATTTACCCGGCCCTGATCGCCACCCTCTTTGG GAAGACGAACAGCGCTCCGAATTTTGGGCTGATCTTCTTGTTCTATGGCC TTGCCTCCCTGGTCGGGCTCAGTGTCCTACCCTGGTTGTCTCCTGAGCTG ACCCCATTGTGCGATGTGCTGGGAGGGATCGCACTGACCTCGGCGGGGTC CGTGTGGGGGCTGCAGGCCTGGTACACACCCAAGCtgaaagcggggggga ggcatcCGCTTTTGcgatgaATGATGATTATCCCCTTCCTACGCACGGGC CCCAAAGCAGCAATTTTGGGAGGTTTCCTGCTCCATTTGGTCATGGGCAC GCTCTATACTTTCGGCTCCCTGACCGTGTATCTCACTTCCTACCTACGCG TTTATGATCCTACCGTTACCTACAACAACACCATCGTAATTTATGCGTGT ACAATAGCTGGGCAAGCTCTTTTGATGTTTCTTGGTGGAAAAATTGAACT TCGCGTGGGTCCTCGCGCGGCCGCTGCCATTGGTTCATGCTGCTTGGTCG GCGctcccttgctctcttcAATGGTGACGAGCCTGTGGGCGATGACATGC ACCTATGGGCTACTGTTTGGgtttggaggaggcctgaCGTATACCGTGCC CCTCGTGTGCGGGTACCGGTGGGAGCCAGAGCGCAAGGGACTGGTCAGCG GCGTGATTCTGAGCGGCTTCggcctctccgccttggTCTTCAATCAGATC CAGTCCGTCCTCGTCAATCCGCACAATTTGAAGCCGGACGTGGTCTACAA GAATAAGCGATACTTCGGGCCCGGCCCTGTGACCGACGCGGTCCCGGGCT TGCTGGTAAAGCTCGGCCTCCTATACTCCCTGCTCTGCGTCACCGGCACC CTTCTGTTGCAGGACCCTATCTACAAGAAGatcgaggacggggcggagga agaggaggaggacaagaaagagagaggctgtttgtccgcttcctcccact acCTGGACATTGTCGGGGCTGAGTCGACCGCCCTGGTGGCAGCCGGCGAC GGGCCCGCTCACGACAGTCGTGTCCACAAGAGAGACGCCCCGTGCGAGGT AGCTGGGGGTTCCTCGCCGCTCCGACggcgtgggtgggaggaggaagggg ctaTGGAAATCTCGACTCTGGAATACCAGCGGTTgcgggaagacagggag ccggtgggagagggagggaaggggagggaaggagggagaggaggagtcgC GGTAGGGAATGGAGGACATAAAAATGGTGTCGGGGAAGAGgtaaagggag gagggagggacttggcagggaaggagccAAGGTTAGGAGGTACGCAGGTC GATAAGGGCTCAGACAAGGACGTAAACGGGGAAAGGGCCAGGccgggagc ggaggaggaggaggaggtggaggtatCACCGTCGGAACTCGTCTGCCTGC CGCAAGCGTGGCACGTGTCCCTGTCGTTCACCTTAGGGGCCTTGAGCGGG CTGGTAACCCTGGCCACCTACAAGAGTATCGGCATCTCCACCTTCCTGGA CGACCACTTCATGTCCGCAGTTGTGGGCAGCGTGTCCTCCGTGGCCAACG CCCTCGGGCGGATTTTTTGGGGCTGGATGAGCGACCGTGCGGGTGCTTAT CGCACGCTCTACATCCTCTGCCTGTGTCAGGCAGGCTTCCTTTTTGCCTG GGGCCTGACGGTGGGCGCGTGGAAGAGCCGGTGGCTGTTTGCGCTCTGCG TCGCCGGGGTGGCCTTCTCCCACGGGGGCAATTTTGCAATTTACCCGGCC CTGATCGCCACCCTCTTTGGGAAGACGAACAGCGCTCCGAATTTTGGGCT GATCTTCTTGTTCTATGGCCTTGCCTCCCTGGTCGGGCTCAGTGTCCTAC CCTGGTTGTCTCCTGAGCTGACCCCATTGTGCGATGTGCTGGGAGGGATC GCACTGACCTCGGCGGGGTCCGTGTGGGGGCTGCAGGCCTGGTACACACC CAAGCtgaaagcgggggggaggcatcCGCTTTTGcgatgaATGATGATTA TCCCCTTCCTACGCACGGGCCCCAAAGCAGCAATTTTGGGAGGTTTCCTG CTCCATTTGGTCATGGGCACGCTCTATACTTTCGGCTCCCTGACCGTGTA TCTCACTTCCTACCTACGCGTTTATGATCCTACCGTTACCTACAACAACA CCATCGTAATTTATGCGTGTACAATAGCTGGGCAAGCTCTTTTGATGTTT CTTGGTGGAAAAATTGAACTTCGCGTGGGTCCTCGCGCGGCCGCTGCCAT TGGTTCATGCTGCTTGGTCGGCGctcccttgctctcttcAATGGTGACGA GCCTGTGGGCGATGACATGCACCTATGGGCTACTGTTTGGgtttggagga ggcctgaCGTATACCGTGCCCCTCGTGTGCGGGTACCGGTGGGAGCCAGA GCGCAAGGGACTGGTCAGCGGCGTGATTCTGAGCGGCTTCggcctctccg ccttggTCTTCAATCAGATCCAGTCCGTCCTCGTCAATCCGCACAATTTG AAGCCGGACGTGGTCTACAAGAATAAGCGATACTTCGGGCCCGGCCCTGT GACCGACGCGGTCCCGGGCTTGCTGGTAAAGCTCGGCCTCCTATACTCCC TGCTCTGCGTCACCGGCACCCTTCTGTTGCAGGACCCTATCTACAAGAAG atcgaggacggggcggaggaagaggaggaggacaagaaagagagaggctg tttgtccgcttcctcccactacCTGGACATTGTCGGGGCTGAGTCGACCG CCCTGGTGGCAGCCGGCGACGGGCCCGCTCACGACAGTCGTGTCCACAAG AGAGACGCCCCGTGCGAGGTAGCTGGGGGTTCCTCGCCGCTCCGACggcg tgggtgggaggaggaaggggctaTGGAAATCTCGACTCTGGAATACCAGC GGTTgcgggaagacagggagccggtgggagagggagggaaggggagggaa ggagggagaggaggagtcgCGGTAGGGAATGGAGGACATAAAAATGGTGT CGGGGAAGAGgtaaagggaggagggagggacttggcagggaaggagccAA GGTTAGGAGGTACGCAGGTCGATAAGGGCTCAGACAAGGACGTAAACGGG GAAAGGGCCAGGccgggagcggaggaggaggaggaggtggaggtatCACC GTCGGAACTCGTCTGCCTGCCGCAAGCGTGGCACGTGTCCCTGTCGTTCA CCTTAGGGGCCTTGAGCGGGCTGGTAACCCTGGCCACCTACAAGAGTATC GGCATCTCCACCTTCCTGGACGACCACTTCATGTCCGCAGTTGTGGGCAG CGTGTCCTCCGTGGCCAACGCCCTCGGGCGGATTTTTTGGGGCTGGATGA GCGACCGTGCGGGTGCTTATCGCACGCTCTACATCCTCTGCCTGTGTCAG GCAGGCTTCCTTTTTGCCTGGGGCCTGACGGTGGGCGCGTGGAAGAGCCG GTGGCTGTTTGCGCTCTGCGTCGCCGGGGTGGCCTTCTCCCACGGGGGCA ATTTTGCAATTTACCCGGCCCTGATCGCCACCCTCTTTGGGAAGACGAAC AGCGCTCCGAATTTTGGGCTGATCTTCTTGTTCTATGGCCTTGCCTCCCT GGTCGGGCTCAGTGTCCTACCCTGGTTGTCTCCTGAGCTGACCCCATTGT GCGATGTGCTGGGAGGGATCGCACTGACCTCGGCGGGGTCCGTGTGGGGG CTGCAGGCCTGGTACACACCCAAGCtgaaagcgggggggaggcatcCGCT TTTGcgatga back to top
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