EWM25928.1, cds4744 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|585107799|gb|EWM25928.1| (alpha beta hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 350.132 bits (897), Expect = 3.319e-122 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0 Query: 1 MDIAAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKEQKGGL 168 MDIAAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKEQKGGL Sbjct: 1 MDIAAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKEQKGGL 168
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|521962136|ref|WP_020473741.1| (alpha/beta hydrolase [Zavarzinella formosa]) HSP 1 Score: 125.561 bits (314), Expect = 3.841e-32 Identity = 65/151 (43.05%), Postives = 88/151 (58.28%), Query Frame = 0 Query: 13 QVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKE 163 P D +RA+R VR+ D ++GV G SAGGHL +T + D G A A + I++ RPDF +L YPVISME G T+ S+ NL G ++ ++ VE+FS EK V PP ++FHT DD V VEN + +AL+KA V E Sbjct: 105 NAPMHDVQRAIRYVRANAEKYKIDPKRVGVWGFSAGGHLASTAATHFDAGKADAADPIDKVSCRPDFAILAYPVISMETGTTHGGSRNNLIG----AKPDEKLVEFFSNEKQVTKDTPPTYIFHTADDKAVPVENAKKFYEALKKAGVPAE 251
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|499127746|ref|WP_010856565.1| (alpha/beta hydrolase [Lunatimonas lonarensis] >gi|496561074|gb|EON75281.1| Endo-1,4-beta-xylanase B precursor [Lunatimonas lonarensis]) HSP 1 Score: 125.561 bits (314), Expect = 5.517e-32 Identity = 66/160 (41.25%), Postives = 95/160 (59.38%), Query Frame = 0 Query: 4 AAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKE 163 +AE VP DA+RA+R+VRS+ D KIG++G SAGGHL ++L + D G+ A++ +E+ RPDF +L YPVIS + T+ S+ NL G Q ++VEYFS EK V PP F+FH++DD VV + ++ R +AL +V E Sbjct: 116 SAENQTEPHLVPLSDAQRAMRLVRSRAAEWHIDPGKIGIMGFSAGGHLASSLATHFDGGDPSASDVVEKFSCRPDFAILAYPVISFDPAYTHIGSRNNLIGQ----QPDSKWVEYFSNEKQVTSETPPSFLFHSQDDTVVPISHSIRFYEALTLHQVPAE 271
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|919351848|ref|WP_052808183.1| (alpha/beta hydrolase [Methylococcaceae bacterium 73a]) HSP 1 Score: 124.02 bits (310), Expect = 2.904e-31 Identity = 64/147 (43.54%), Postives = 89/147 (60.54%), Query Frame = 0 Query: 14 VPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKV 160 +P DDAR+ALRVVR + + ++GV G SAGGHL +TL D G AT+ IE+Q SRPDF +L YPVISM++G+T+ PS+ NL G + + +S ++ V+ PP F+ H DD VV VEN+ + L K +V Sbjct: 136 IPADDARQALRVVRQRAAEWNINPQRVGVWGFSAGGHLASTLSTAFDAGQPAATDPIERQSSRPDFSILFYPVISMDEGVTHGPSRRNLLGPTPAPE----LIARYSNDQQVSAQTPPTFLLHAGDDTVVPVENSLQYYRQLVKHQV 278
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1130434135|ref|WP_075602804.1| (esterase [Labilibacter aurantiacus]) HSP 1 Score: 123.25 bits (308), Expect = 3.873e-31 Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 0 Query: 13 QVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVS 161 Q P DA+RA+R +RS P + +K+GVIG SAGGHL +++ + + ++I+ +RPDF +L+YPVISM+DG+T+ SK NL G N + + VE FS E V + PP FM H+ DD V VEN+ RM AL K KVS Sbjct: 124 QAPLQDAQRAMRWIRSNAPDYNVNVNKVGVIGFSAGGHLASSIGTHYEMPIYDRKDSIDALSARPDFMMLIYPVISMQDGVTHKGSKKNLLGKNPSPE----LVEEFSNELQVTNDTPPTFMVHSADDKAVPVENSIRMYQALVKHKVS 268
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1057368430|ref|WP_068728615.1| (alpha/beta hydrolase [Paenibacillus sp. DMB5] >gi|974711828|gb|KUP21419.1| esterase [Paenibacillus sp. DMB5]) HSP 1 Score: 120.939 bits (302), Expect = 1.311e-30 Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 18 DARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKV 160 DA+RALR +R + D ++G++G SAGGHL +T D GN A +E+Q RPDF +L YPVISM DG+T++ S+TNL G N + + S E V PP F++HT DD V VEN+ + AL + ++ Sbjct: 86 DAQRALRTIRFRAGEYGIDPERVGILGFSAGGHLASTASGLFDRGNKEAEEALERQSCRPDFSILCYPVISMTDGVTHEGSRTNLLGDN----PSEELIRRLSGELQVTPDTPPAFLWHTADDGAVPVENSLLLASALRRQQI 224
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1054570924|ref|WP_066340133.1| (alpha/beta hydrolase [Bacillus litoralis] >gi|1033887148|gb|OAS82562.1| esterase [Bacillus litoralis]) HSP 1 Score: 120.553 bits (301), Expect = 1.437e-30 Identity = 66/150 (44.00%), Postives = 87/150 (58.00%), Query Frame = 0 Query: 14 VPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKE 163 VP DA+RA+R VR D KIG++G SAGGHL AT+ N E N ++TI+Q+ RPD +L YPVIS ++ S TNL G N T Q R + S E++V+ PP F++HT DDA V VEN+ AL K+K+ E Sbjct: 82 VPLLDAKRAIRYVRHYAEEWNLDKQKIGILGFSAGGHLAATVSTNNSEENTETSDTIDQESCRPDLAILCYPVISFTQHF-HEGSMTNLLGENSTEQLRA----FLSNEQNVSTSTPPTFLWHTADDAAVPVENSLLYAQALSKSKIPYE 226
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1087394429|emb|SDI24781.1| (Acetyl esterase/lipase [Paenibacillus typhae]) HSP 1 Score: 119.783 bits (299), Expect = 3.086e-30 Identity = 59/144 (40.97%), Postives = 83/144 (57.64%), Query Frame = 0 Query: 17 DDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKV 160 +DA+RALR +R D ++G++G SAGGHL +T D GN A +E+Q RPDF +L YPVISM DG+T++ S+TNL G N + + S E V PP F++HT DD V VEN+ + AL + ++ Sbjct: 85 EDAQRALRTIRFHAGEYGVDPERVGILGFSAGGHLASTASGLFDRGNLEAEEALERQSCRPDFSILCYPVISMTDGVTHEGSRTNLLGDN----PSEELIRRLSGELQVTPDTPPAFLWHTADDDAVPVENSLLLASALRRQQI 224
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|522104903|ref|WP_020616112.1| (alpha/beta hydrolase [Paenibacillus daejeonensis]) HSP 1 Score: 119.783 bits (299), Expect = 3.310e-30 Identity = 64/143 (44.76%), Postives = 85/143 (59.44%), Query Frame = 0 Query: 18 DARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKV 160 DA+RA+R VR V D KIG++G SAGGHL AT +DEGN A + +++ SRPD VL YPVI+M+D T+ S+TN G T ++ + S E HVN PP F++HT +DA V VEN+ AL +A V Sbjct: 90 DAQRAIRYVRFHAAVWGLDASKIGLLGFSAGGHLTATAGTRHDEGNPDAADPVDRVSSRPDLIVLCYPVITMKDPYTHQGSRTNQLGDQPTEEQ----ITLLSNELHVNEQTPPTFLWHTSEDAAVPVENSLSFAAALSRAGV 228
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1120222609|ref|WP_073089909.1| (alpha/beta hydrolase [Cyclobacterium lianum] >gi|1110439756|emb|SHM31761.1| Acetyl esterase/lipase [Cyclobacterium lianum]) HSP 1 Score: 120.553 bits (301), Expect = 4.051e-30 Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 0 Query: 14 VPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKE 163 VP D +RA+R+VR D +IG++G SAGGHL +TL + DEGN + IEQQ SRPDF +L YPVIS + +T+ S+ NL G + Q++VEYFS EK V PP F+FH++DD V V+++ L + ++ E Sbjct: 126 VPMADGQRAIRLVRHHAEDWGIDPEQIGIMGFSAGGHLASTLGTHFDEGNPGDEDPIEQQSSRPDFMILGYPVISFTEHITHIGSRNNLIGKD----PEQKWVEYFSNEKQVRADSPPTFIFHSQDDTGVPVQHSLLFYQGLLEKQIPAE 271 The following BLAST results are available for this feature:
BLAST of EWM25928.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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