EWM25928.1, cds4744 (CDS) Nannochloropsis gaditana

Overview
NameEWM25928.1
Unique Namecds4744
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:262743..262768 -
Alignment locationCM002464.1:262609..262622 -
Alignment locationCM002464.1:261996..262072 -
Alignment locationCM002464.1:261819..261922 -
Alignment locationCM002464.1:261472..261757 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25928.1
Productalpha beta hydrolase
Orig transcript idgnl|cribi|Naga_100134g9.9887.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:262743..262768 -
CM002464.1supercontigCM002464.1:262609..262622 -
CM002464.1supercontigCM002464.1:261996..262072 -
CM002464.1supercontigCM002464.1:261819..261922 -
CM002464.1supercontigCM002464.1:261472..261757 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR013094AB_hydrolase_3
Homology
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|585107799|gb|EWM25928.1| (alpha beta hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 350.132 bits (897), Expect = 3.319e-122
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
Query:    1 MDIAAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKEQKGGL 168
            MDIAAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKEQKGGL
Sbjct:    1 MDIAAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKEQKGGL 168          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|521962136|ref|WP_020473741.1| (alpha/beta hydrolase [Zavarzinella formosa])

HSP 1 Score: 125.561 bits (314), Expect = 3.841e-32
Identity = 65/151 (43.05%), Postives = 88/151 (58.28%), Query Frame = 0
Query:   13 QVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKE 163
              P  D +RA+R VR+       D  ++GV G SAGGHL +T   + D G A A + I++   RPDF +L YPVISME G T+  S+ NL G    ++  ++ VE+FS EK V    PP ++FHT DD  V VEN  +  +AL+KA V  E
Sbjct:  105 NAPMHDVQRAIRYVRANAEKYKIDPKRVGVWGFSAGGHLASTAATHFDAGKADAADPIDKVSCRPDFAILAYPVISMETGTTHGGSRNNLIG----AKPDEKLVEFFSNEKQVTKDTPPTYIFHTADDKAVPVENAKKFYEALKKAGVPAE 251          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|499127746|ref|WP_010856565.1| (alpha/beta hydrolase [Lunatimonas lonarensis] >gi|496561074|gb|EON75281.1| Endo-1,4-beta-xylanase B precursor [Lunatimonas lonarensis])

HSP 1 Score: 125.561 bits (314), Expect = 5.517e-32
Identity = 66/160 (41.25%), Postives = 95/160 (59.38%), Query Frame = 0
Query:    4 AAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKE 163
            +AE       VP  DA+RA+R+VRS+      D  KIG++G SAGGHL ++L  + D G+  A++ +E+   RPDF +L YPVIS +   T+  S+ NL G     Q   ++VEYFS EK V    PP F+FH++DD VV + ++ R  +AL   +V  E
Sbjct:  116 SAENQTEPHLVPLSDAQRAMRLVRSRAAEWHIDPGKIGIMGFSAGGHLASSLATHFDGGDPSASDVVEKFSCRPDFAILAYPVISFDPAYTHIGSRNNLIGQ----QPDSKWVEYFSNEKQVTSETPPSFLFHSQDDTVVPISHSIRFYEALTLHQVPAE 271          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|919351848|ref|WP_052808183.1| (alpha/beta hydrolase [Methylococcaceae bacterium 73a])

HSP 1 Score: 124.02 bits (310), Expect = 2.904e-31
Identity = 64/147 (43.54%), Postives = 89/147 (60.54%), Query Frame = 0
Query:   14 VPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKV 160
            +P DDAR+ALRVVR +      +  ++GV G SAGGHL +TL    D G   AT+ IE+Q SRPDF +L YPVISM++G+T+ PS+ NL G     +     +  +S ++ V+   PP F+ H  DD VV VEN+ +    L K +V
Sbjct:  136 IPADDARQALRVVRQRAAEWNINPQRVGVWGFSAGGHLASTLSTAFDAGQPAATDPIERQSSRPDFSILFYPVISMDEGVTHGPSRRNLLGPTPAPE----LIARYSNDQQVSAQTPPTFLLHAGDDTVVPVENSLQYYRQLVKHQV 278          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1130434135|ref|WP_075602804.1| (esterase [Labilibacter aurantiacus])

HSP 1 Score: 123.25 bits (308), Expect = 3.873e-31
Identity = 67/149 (44.97%), Postives = 92/149 (61.74%), Query Frame = 0
Query:   13 QVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVS 161
            Q P  DA+RA+R +RS  P    + +K+GVIG SAGGHL +++  + +       ++I+   +RPDF +L+YPVISM+DG+T+  SK NL G N + +     VE FS E  V +  PP FM H+ DD  V VEN+ RM  AL K KVS
Sbjct:  124 QAPLQDAQRAMRWIRSNAPDYNVNVNKVGVIGFSAGGHLASSIGTHYEMPIYDRKDSIDALSARPDFMMLIYPVISMQDGVTHKGSKKNLLGKNPSPE----LVEEFSNELQVTNDTPPTFMVHSADDKAVPVENSIRMYQALVKHKVS 268          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1057368430|ref|WP_068728615.1| (alpha/beta hydrolase [Paenibacillus sp. DMB5] >gi|974711828|gb|KUP21419.1| esterase [Paenibacillus sp. DMB5])

HSP 1 Score: 120.939 bits (302), Expect = 1.311e-30
Identity = 59/143 (41.26%), Postives = 83/143 (58.04%), Query Frame = 0
Query:   18 DARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKV 160
            DA+RALR +R +      D  ++G++G SAGGHL +T     D GN  A   +E+Q  RPDF +L YPVISM DG+T++ S+TNL G N      +  +   S E  V    PP F++HT DD  V VEN+  +  AL + ++
Sbjct:   86 DAQRALRTIRFRAGEYGIDPERVGILGFSAGGHLASTASGLFDRGNKEAEEALERQSCRPDFSILCYPVISMTDGVTHEGSRTNLLGDN----PSEELIRRLSGELQVTPDTPPAFLWHTADDGAVPVENSLLLASALRRQQI 224          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1054570924|ref|WP_066340133.1| (alpha/beta hydrolase [Bacillus litoralis] >gi|1033887148|gb|OAS82562.1| esterase [Bacillus litoralis])

HSP 1 Score: 120.553 bits (301), Expect = 1.437e-30
Identity = 66/150 (44.00%), Postives = 87/150 (58.00%), Query Frame = 0
Query:   14 VPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKE 163
            VP  DA+RA+R VR        D  KIG++G SAGGHL AT+   N E N   ++TI+Q+  RPD  +L YPVIS      ++ S TNL G N T Q R     + S E++V+   PP F++HT DDA V VEN+     AL K+K+  E
Sbjct:   82 VPLLDAKRAIRYVRHYAEEWNLDKQKIGILGFSAGGHLAATVSTNNSEENTETSDTIDQESCRPDLAILCYPVISFTQHF-HEGSMTNLLGENSTEQLRA----FLSNEQNVSTSTPPTFLWHTADDAAVPVENSLLYAQALSKSKIPYE 226          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1087394429|emb|SDI24781.1| (Acetyl esterase/lipase [Paenibacillus typhae])

HSP 1 Score: 119.783 bits (299), Expect = 3.086e-30
Identity = 59/144 (40.97%), Postives = 83/144 (57.64%), Query Frame = 0
Query:   17 DDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKV 160
            +DA+RALR +R        D  ++G++G SAGGHL +T     D GN  A   +E+Q  RPDF +L YPVISM DG+T++ S+TNL G N      +  +   S E  V    PP F++HT DD  V VEN+  +  AL + ++
Sbjct:   85 EDAQRALRTIRFHAGEYGVDPERVGILGFSAGGHLASTASGLFDRGNLEAEEALERQSCRPDFSILCYPVISMTDGVTHEGSRTNLLGDN----PSEELIRRLSGELQVTPDTPPAFLWHTADDDAVPVENSLLLASALRRQQI 224          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|522104903|ref|WP_020616112.1| (alpha/beta hydrolase [Paenibacillus daejeonensis])

HSP 1 Score: 119.783 bits (299), Expect = 3.310e-30
Identity = 64/143 (44.76%), Postives = 85/143 (59.44%), Query Frame = 0
Query:   18 DARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKV 160
            DA+RA+R VR    V   D  KIG++G SAGGHL AT    +DEGN  A + +++  SRPD  VL YPVI+M+D  T+  S+TN  G   T ++    +   S E HVN   PP F++HT +DA V VEN+     AL +A V
Sbjct:   90 DAQRAIRYVRFHAAVWGLDASKIGLLGFSAGGHLTATAGTRHDEGNPDAADPVDRVSSRPDLIVLCYPVITMKDPYTHQGSRTNQLGDQPTEEQ----ITLLSNELHVNEQTPPTFLWHTSEDAAVPVENSLSFAAALSRAGV 228          
BLAST of EWM25928.1 vs. NCBI_GenBank
Match: gi|1120222609|ref|WP_073089909.1| (alpha/beta hydrolase [Cyclobacterium lianum] >gi|1110439756|emb|SHM31761.1| Acetyl esterase/lipase [Cyclobacterium lianum])

HSP 1 Score: 120.553 bits (301), Expect = 4.051e-30
Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:   14 VPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGHLMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKTNLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYRMVDALEKAKVSKE 163
            VP  D +RA+R+VR        D  +IG++G SAGGHL +TL  + DEGN    + IEQQ SRPDF +L YPVIS  + +T+  S+ NL G +      Q++VEYFS EK V    PP F+FH++DD  V V+++      L + ++  E
Sbjct:  126 VPMADGQRAIRLVRHHAEDWGIDPEQIGIMGFSAGGHLASTLGTHFDEGNPGDEDPIEQQSSRPDFMILGYPVISFTEHITHIGSRNNLIGKD----PEQKWVEYFSNEKQVRADSPPTFIFHSQDDTGVPVQHSLLFYQGLLEKQIPAE 271          
The following BLAST results are available for this feature:
BLAST of EWM25928.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107799|gb|EWM25928.1|3.319e-122100.00alpha beta hydrolase [Nannochloropsis gaditana][more]
gi|521962136|ref|WP_020473741.1|3.841e-3243.05alpha/beta hydrolase [Zavarzinella formosa][more]
gi|499127746|ref|WP_010856565.1|5.517e-3241.25alpha/beta hydrolase [Lunatimonas lonarensis] >gi|... [more]
gi|919351848|ref|WP_052808183.1|2.904e-3143.54alpha/beta hydrolase [Methylococcaceae bacterium 7... [more]
gi|1130434135|ref|WP_075602804.1|3.873e-3144.97esterase [Labilibacter aurantiacus][more]
gi|1057368430|ref|WP_068728615.1|1.311e-3041.26alpha/beta hydrolase [Paenibacillus sp. DMB5] >gi|... [more]
gi|1054570924|ref|WP_066340133.1|1.437e-3044.00alpha/beta hydrolase [Bacillus litoralis] >gi|1033... [more]
gi|1087394429|emb|SDI24781.1|3.086e-3040.97Acetyl esterase/lipase [Paenibacillus typhae][more]
gi|522104903|ref|WP_020616112.1|3.310e-3044.76alpha/beta hydrolase [Paenibacillus daejeonensis][more]
gi|1120222609|ref|WP_073089909.1|4.051e-3042.67alpha/beta hydrolase [Cyclobacterium lianum] >gi|1... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4756rna4756Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications