rna4756, rna4756 (mRNA) Nannochloropsis gaditana

Overview
Namerna4756
Unique Namerna4756
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1077
Alignment locationCM002464.1:261472..262768 -

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Properties
Property NameValue
Productalpha beta hydrolase
Orig transcript idgnl|cribi|Naga_100134g9.9887.mrna
Orig protein idgnl|cribi|Naga_100134g9.9887
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:261472..262768 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100134g9gene4593Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4756rna4756-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM25928.1cds4744Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4756 ID=rna4756|Name=rna4756|organism=Nannochloropsis gaditana|type=mRNA|length=1077bp
ATGCCGCCGCCGCGGGGTTTCCTATCCTTCGTGGCGGTCGCGTTGGTCCT
GATTATGTCGCCCATGTTATTTATGAGGAATCCTGCTGAAACGTATATGA
ACCTTTTGGGAACGCGAGGCTTACGGCGGGAGGCGAAGATGTCAATACCT
TGGGTGATTGAAGGAGAACCAAGGGAGCCAGCGCATGTGCGGGTGGTGAT
ACGGACTCACGCACGGGAACAACTCCAGTTGCGATCTTTAATTTACGGGT
TGCGCGCGCAAAGCGAGGGACAAGCCGGTTTTAAGGCAGATTTTGTGCTG
GTCCCAACGGAACCAGCTTCGTTGCAAACGTATCAACGACTGTGTAACGA
GATGAATGTGGGTTTTGATGACCTCTACCTGGTGGAGCTTCCAGACACAT
TTTACGAAGATGTCAAACTCAGAGATAGCCGCTTGACCTGCACCGACGCA
GTCCGAACACGATACGTGCAAGAGTTCAACGCGGATGAGGTCCACCGATA
CTGCGATTTCGACCACTACGTGTACTATGCTGCCACGGACAAGGCTCTCG
CGACGTTTGTGCTGCCTTGCAGAAGCTGTACGCATGTTCTGGTTACGAAT
GGGGACAACGGTTACGCCCCTTCCTTTTTGCGGGAGACGGTACGGCAGTC
GGCTGACCTGGCCATCGTGGGGGGTATTGGACCACGGAAGGAGACTTTTC
TTGAGCTCTTTGCCTGTCGATGCTGGGCCGAAGGAGGTGCACGATGCAGA
CTATTGGATGGTGGTCAACGCCTTGGAGCGGGGCTTGAGCTTTGCCGTGT
GCAAAAACCAGCTCCTCATGTATCACAACTGACTGATGCTCGAGCCGCGA
TTGGGAAGAATTACAACACCGTCGAGACTTCCTGTAAGCCAGGTTATTGT
GGCGGATTAATTCTCTCCGGAGTTCTAGGGAGGAATCTAAAGCAATTTTG
TATCCAATTGTATAGTTTCATTTTGGAGCCACGGATCCTCGTGTATCCCT
TGACAAGTGTTTGTTCTGAGAAAACTGACACGTCCCCAAAATCGACGCGA
TTTGCTCGATATGAATTCTCTACCTGA
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protein sequence of rna4756

>rna4756-protein ID=rna4756-protein|Name=rna4756|organism=Nannochloropsis gaditana|type=polypeptide|length=168bp
MDIAAEGLRRSKQVPEDDARRALRVVRSQLPVSARDTHKIGVIGSSAGGH
LMATLMAYNDEGNAHATNTIEQQRSRPDFGVLVYPVISMEDGLTYDPSKT
NLFGHNLTSQKRQRFVEYFSIEKHVNHLFPPVFMFHTKDDAVVSVENTYR
MVDALEKAKVSKEQKGGL
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mRNA from alignment at CM002464.1:261472..262768-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4756 ID=rna4756|Name=rna4756|organism=Nannochloropsis gaditana|type=mRNA|length=1297bp|location=Sequence derived from alignment at CM002464.1:261472..262768- (Nannochloropsis gaditana)
ATGGACATCGCTGCTGAAGGCTTGCGGTAGGTGGTTGATAGAAGCATTGG
AATGAAGGAGCAAGGAGAAGTAACGTTTCCTTTGGATTTCCTGCATCACA
ATTCTACAACTTTGAACCATCCTTTTTTGGATAAATAAAATTCTAGACGG
TCAAAGCAGGGTTTGTTTATATCTGTAGCATTTTCTGTGGCGACATTGGT
GGCATTTGCATTGATAGCCGCCTTCCAAGAGAGTCAAGGACGACACACCA
ACTTTCGAAATGACCGCTCTTCTCATGATGGGCAAGGCGCGTGCTACGAC
CCATACATTATACCGTTATGGCCACATAATGGCACAAAAGTTCAAAACCC
TCAAACGCGCTTCCTCACAGCGTACGTTCCTCAAGGTAGGCATGCAAGCA
TTCTGTTTTGAAAGTACCGCGTTATTAATAGGTTGCCTTTTCTTCGACCG
CCAGCAAACCAGTCTTGTGGGGCATCAGCCGTGATTGCTCCGGGTGGAGC
ATATTGGGACACAGCGAGAGACGTTGAGGGGACACCATATGCCAAGTGGC
TATGTGCGCAAGGCGTGGCATCTTATGTTCTACAGTACGGGTGTGCCAGC
TCGGGGTACGTCAAAAAACTCAGCATTTTATAACTCCTAAATCTGCTTCT
TAACATTATTGTCTCCTTCGATATGCATCTAGTTTTCACGCCCCAGTGCC
CGAAGACGACGCTCGTCGCGCCCTGCGTGTCGTCCGAAGTCAGCTGCCAG
TTTCCGCTCGTGATACCCACAAGGTAATCACCTCGTGTCCCCATGCTTTC
GAGAGCGGAAGGCGTTTTTCCTGATCCCCCGCTTTGCCAACAATAGATCG
GAGTGATAGGCAGTTCTGCCGGCGGACACTTGATGGCAACACTGATGGCG
TATAACGACGAAGGGAACGCGCACGCAACAAATACTATTGAGCAACAGAG
GTAGGACCCATGGGGCGATCTTAAAAGTTATCCAGCGCTCAACAACGAAT
CCCCCCCACAGAAGTCGCCCTGATTTTGGTGTCCTTGTATATCCCGTCAT
TTCCATGGAGGACGGCCTGACTTACGACCCCTCAAAGACCAACCTTTTCG
GGCACAACCTGACCTCGCAAAAACGCCAAAGATTTGTGGAGTATTTTTCT
ATCGAGAAGCACGTGAATCATCTGTTCCCGCCAGTATTCATGTTCCACAC
CAAAGACGACGCGGTTGTCAGCGTGGAAAATACCTATCGAATGGTCGATG
CACTTGAGAAGGCAAAGGTATCTAAAGAGCAAAAGGGAGGGCTGTGA
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Coding sequence (CDS) from alignment at CM002464.1:261472..262768-

>rna4756 ID=rna4756|Name=rna4756|organism=Nannochloropsis gaditana|type=CDS|length=2535bp|location=Sequence derived from alignment at CM002464.1:261472..262768- (Nannochloropsis gaditana)
AAGTCGCCCTGATTTTGGTGTCCTTGTATATCCCGTCATTTCCATGGAGG
ACGGCCTGACTTACGACCCCTCAAAGACCAACCTTTTCGGGCACAACCTG
ACCTCGCAAAAACGCCAAAGATTTGTGGAGTATTTTTCTATCGAGAAGCA
CGTGAATCATCTGTTCCCGCCAGTATTCATGTTCCACACCAAAGACGACG
CGGTTGTCAGCGTGGAAAATACCTATCGAATGGTCGATGCACTTGAGAAG
GCAAAGGTATCTAAAGAGCAAAAGGGAGGGCTGTGAATCGGAGTGATAGG
CAGTTCTGCCGGCGGACACTTGATGGCAACACTGATGGCGTATAACGACG
AAGGGAACGCGCACGCAACAAATACTATTGAGCAACAGAGTGCCCGAAGA
CGACGCTCGTCGCGCCCTGCGTGTCGTCCGAAGTCAGCTGCCAGTTTCCG
CTCGTGATACCCACAAGACGGTCAAAGCAGGATGGACATCGCTGCTGAAG
GCTTGCGAAGTCGCCCTGATTTTGGTGTCCTTGTATATCCCGTCATTTCC
ATGGAGGACGGCCTGACTTACGACCCCTCAAAGACCAACCTTTTCGGGCA
CAACCTGACCTCGCAAAAACGCCAAAGATTTGTGGAGTATTTTTCTATCG
AGAAGCACGTGAATCATCTGTTCCCGCCAGTATTCATGTTCCACACCAAA
GACGACGCGGTTGTCAGCGTGGAAAATACCTATCGAATGGTCGATGCACT
TGAGAAGGCAAAGGTATCTAAAGAGCAAAAGGGAGGGCTGTGAATCGGAG
TGATAGGCAGTTCTGCCGGCGGACACTTGATGGCAACACTGATGGCGTAT
AACGACGAAGGGAACGCGCACGCAACAAATACTATTGAGCAACAGAGTGC
CCGAAGACGACGCTCGTCGCGCCCTGCGTGTCGTCCGAAGTCAGCTGCCA
GTTTCCGCTCGTGATACCCACAAGACGGTCAAAGCAGGATGGACATCGCT
GCTGAAGGCTTGCGAAGTCGCCCTGATTTTGGTGTCCTTGTATATCCCGT
CATTTCCATGGAGGACGGCCTGACTTACGACCCCTCAAAGACCAACCTTT
TCGGGCACAACCTGACCTCGCAAAAACGCCAAAGATTTGTGGAGTATTTT
TCTATCGAGAAGCACGTGAATCATCTGTTCCCGCCAGTATTCATGTTCCA
CACCAAAGACGACGCGGTTGTCAGCGTGGAAAATACCTATCGAATGGTCG
ATGCACTTGAGAAGGCAAAGGTATCTAAAGAGCAAAAGGGAGGGCTGTGA
ATCGGAGTGATAGGCAGTTCTGCCGGCGGACACTTGATGGCAACACTGAT
GGCGTATAACGACGAAGGGAACGCGCACGCAACAAATACTATTGAGCAAC
AGAGTGCCCGAAGACGACGCTCGTCGCGCCCTGCGTGTCGTCCGAAGTCA
GCTGCCAGTTTCCGCTCGTGATACCCACAAGACGGTCAAAGCAGGATGGA
CATCGCTGCTGAAGGCTTGCGAAGTCGCCCTGATTTTGGTGTCCTTGTAT
ATCCCGTCATTTCCATGGAGGACGGCCTGACTTACGACCCCTCAAAGACC
AACCTTTTCGGGCACAACCTGACCTCGCAAAAACGCCAAAGATTTGTGGA
GTATTTTTCTATCGAGAAGCACGTGAATCATCTGTTCCCGCCAGTATTCA
TGTTCCACACCAAAGACGACGCGGTTGTCAGCGTGGAAAATACCTATCGA
ATGGTCGATGCACTTGAGAAGGCAAAGGTATCTAAAGAGCAAAAGGGAGG
GCTGTGAATCGGAGTGATAGGCAGTTCTGCCGGCGGACACTTGATGGCAA
CACTGATGGCGTATAACGACGAAGGGAACGCGCACGCAACAAATACTATT
GAGCAACAGAGTGCCCGAAGACGACGCTCGTCGCGCCCTGCGTGTCGTCC
GAAGTCAGCTGCCAGTTTCCGCTCGTGATACCCACAAGACGGTCAAAGCA
GGATGGACATCGCTGCTGAAGGCTTGCGAAGTCGCCCTGATTTTGGTGTC
CTTGTATATCCCGTCATTTCCATGGAGGACGGCCTGACTTACGACCCCTC
AAAGACCAACCTTTTCGGGCACAACCTGACCTCGCAAAAACGCCAAAGAT
TTGTGGAGTATTTTTCTATCGAGAAGCACGTGAATCATCTGTTCCCGCCA
GTATTCATGTTCCACACCAAAGACGACGCGGTTGTCAGCGTGGAAAATAC
CTATCGAATGGTCGATGCACTTGAGAAGGCAAAGGTATCTAAAGAGCAAA
AGGGAGGGCTGTGAATCGGAGTGATAGGCAGTTCTGCCGGCGGACACTTG
ATGGCAACACTGATGGCGTATAACGACGAAGGGAACGCGCACGCAACAAA
TACTATTGAGCAACAGAGTGCCCGAAGACGACGCTCGTCGCGCCCTGCGT
GTCGTCCGAAGTCAGCTGCCAGTTTCCGCTCGTGATACCCACAAGACGGT
CAAAGCAGGATGGACATCGCTGCTGAAGGCTTGCG
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Synonyms
Publications