EWM25931.1, cds4738 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM25931.1 vs. NCBI_GenBank
Match: gi|585107802|gb|EWM25931.1| (gcn5-related n-acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 1071.23 bits (2769), Expect = 0.000e+0 Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 0 Query: 1 MSLRCYISSRSRRLQSIIVSLLPCLLVTRSVQALVTAPSLRRGPGMAAAYRSPSEIAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPKHTGLSGPSEVEGRETKGRRGTAPPAPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGADGWRLQGGWDRGAAGFWAGIPGARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWHVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM 528 MSLRCYISSRSRRLQSIIVSLLPCLLVTRSVQALVTAPSLRRGPGMAAAYRSPSEIAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPKHTGLSGPSEVEGRETKGRRGTAPPAPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGADGWRLQGGWDRGAAGFWAGIPGARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWHVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM Sbjct: 1 MSLRCYISSRSRRLQSIIVSLLPCLLVTRSVQALVTAPSLRRGPGMAAAYRSPSEIAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPKHTGLSGPSEVEGRETKGRRGTAPPAPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGADGWRLQGGWDRGAAGFWAGIPGARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWHVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM 528
BLAST of EWM25931.1 vs. NCBI_GenBank
Match: gi|553184921|ref|XP_005854169.1| (gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526] >gi|553185591|ref|XP_005854272.1| gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526] >gi|422294790|gb|EKU22090.1| gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526] >gi|422294892|gb|EKU22192.1| gcn5-related n-acetyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 963.37 bits (2489), Expect = 0.000e+0 Identity = 475/483 (98.34%), Postives = 475/483 (98.34%), Query Frame = 0 Query: 46 MAAAYRSPSEIAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPKHTGLSGPSEVEGRETKGRRGTAPPAPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGADGWRLQGGWDRGAAGFWAGIPGARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWHVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM 528 MAAAYRSPSE AAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIP HTGLSGPSEVEGRETKGR GTAPP PDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGA GWRLQGGWDRG AGFWAGIP ARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAW VGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM Sbjct: 1 MAAAYRSPSETAAAPAIRPSSDSHKEHVPVADTLTYLSHHSPSSFDLRSPYVRLEVRPANLQELNLVVDMRMEVFGPGKEASTAGSASIPNHTGLSGPSEVEGRETKGRGGTAPPVPDMSAGWKAESLQNLIARQSKGSVIFVVTARDVRHPDAQPVLVASVEASTHEFHEVGFSPCLAQVEDEEEDGEGGEEGAYGWRLQGGWDRGGAGFWAGIPDARGSSVGKASCSSSQPSVLLARTSFLDTPPENKGTGIPSPAHERKQSKLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRLPPRRALGGAWPVGQATRGPASLDGQDPLRLHWAGGGDGPGMGREVDGKGDGGAEMQGRESRRAPQAAEEGRWCAGPREAWKEQPCAWGNPGRENVVWEDRGKCLVGDGNGRDAAEGTRTLKGSRRM 483
BLAST of EWM25931.1 vs. NCBI_GenBank
Match: gi|553196177|ref|XP_005856284.1| (gnat family, partial [Nannochloropsis gaditana CCMP526] >gi|422292762|gb|EKU20064.1| gnat family, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 73.9442 bits (180), Expect = 3.706e-11 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 0 Query: 310 KLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRL 402 KLYVT + V DAFR +GVA ALL AV+ A G Y+CL+ + N +A RLY S Y V SP FA +GL AA+ Y F Y+++ Sbjct: 112 KLYVTELCVRDAFRGKGVATALLKAVDGIADSLGAAYVCLFCERLNLAASRLYISSNYHEVGHSPSVNKFAGALGL---PTAAKAYGFFYKQI 201
BLAST of EWM25931.1 vs. NCBI_GenBank
Match: gi|585106739|gb|EWM25101.1| (gnat family [Nannochloropsis gaditana]) HSP 1 Score: 74.7146 bits (182), Expect = 6.318e-11 Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 0 Query: 310 KLYVTGMMVVDAFRRQGVAAALLTAVEEYARGRGINYICLYVDAYNSSAQRLYQKSGYLVVPFSPQAEAFASKIGLYKGAYAARQYSFAYRRL 402 KLYVT + V DAFR +GVA ALL AV+ A G Y+CL+ + N +A RLY S Y V SP FA +GL AA+ Y F Y+++ Sbjct: 192 KLYVTELCVRDAFRGKGVATALLKAVDGIADSLGAAYVCLFCERLNLAASRLYISSNYHEVGHSPSVNKFAGALGL---PTAAKAYGFFYKQI 281 The following BLAST results are available for this feature:
BLAST of EWM25931.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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