EWM25981.1, cds4682 (CDS) Nannochloropsis gaditana

Overview
NameEWM25981.1
Unique Namecds4682
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:89019..89138 -
Alignment locationCM002464.1:88779..88925 -
Alignment locationCM002464.1:88427..88547 -
Alignment locationCM002464.1:87729..88246 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM25981.1
Productendoglucanase a
Orig transcript idgnl|cribi|Naga_100151g12.9615.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:89019..89138 -
CM002464.1supercontigCM002464.1:88779..88925 -
CM002464.1supercontigCM002464.1:88427..88547 -
CM002464.1supercontigCM002464.1:87729..88246 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|585107882|gb|EWM25981.1| (endoglucanase a [Nannochloropsis gaditana])

HSP 1 Score: 622.854 bits (1605), Expect = 0.000e+0
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0
Query:    1 MKGRMRNIIMLVMASCQIGAGIQSLYGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHGTEAVGVRTGERGGEGPRAVDSRILGVLARSDPSAVFSPILSSPWFFPPSRHLLDAVRHSCHSPHGRVPSMVPLSRHRRPPRLASRPGSPHRQCHGDRQLQGGESIWQPALAGFRAERVDVFRCHCPPFFID 301
            MKGRMRNIIMLVMASCQIGAGIQSLYGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHGTEAVGVRTGERGGEGPRAVDSRILGVLARSDPSAVFSPILSSPWFFPPSRHLLDAVRHSCHSPHGRVPSMVPLSRHRRPPRLASRPGSPHRQCHGDRQLQGGESIWQPALAGFRAERVDVFRCHCPPFFID
Sbjct:    1 MKGRMRNIIMLVMASCQIGAGIQSLYGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHGTEAVGVRTGERGGEGPRAVDSRILGVLARSDPSAVFSPILSSPWFFPPSRHLLDAVRHSCHSPHGRVPSMVPLSRHRRPPRLASRPGSPHRQCHGDRQLQGGESIWQPALAGFRAERVDVFRCHCPPFFID 301          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|917371914|ref|WP_051978626.1| (hypothetical protein [Edaphobacter aggregans])

HSP 1 Score: 102.834 bits (255), Expect = 8.955e-23
Identity = 61/148 (41.22%), Postives = 81/148 (54.73%), Query Frame = 0
Query:   26 YGTSPFADEKMQGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQV---PIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHG 170
            Y  +P+ D+K + PQ IPG V  A++D+GG+ VAYH  D VNHGS ELNP    D  Y + FR  E    SYTK  N     DR   N   +   P +Q+Y GW   G W  +S+ V   G YT  L  TSN GG++ + V+ + + G
Sbjct:    5 YKGAPYLDDKQRVPQTIPGVVECAFYDKGGEGVAYHDTDPVNHGSGELNPA---DGSYLHEFRMHEAVDISYTKFNNS---PDRTDDNPWTIVLPPANQLYVGWTEPGEWFNISVDVHHAGTYTADLLYTSNRGGSISIDVNGHPASG 146          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|959928013|ref|WP_058186623.1| (hypothetical protein [Terracidiphilus gabretensis])

HSP 1 Score: 97.4413 bits (241), Expect = 1.506e-20
Identity = 55/153 (35.95%), Postives = 78/153 (50.98%), Query Frame = 0
Query:   13 MASCQIGAGIQSLYGTSPFADEKMQ-GPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164
            M +       QS Y  +P+ D + Q GPQ IPG+V+ A++D GG+ +AYH  D+ NHGS ELNP    D  Y + FR  EG  TS+ K        D    + +  P D +Y GW   G W  +++   +   YT     TSN G T+ + V+
Sbjct:    1 MTAAAHPQSFQSQYKGTPYGDSRYQDGPQKIPGRVFCAYYDLGGEGIAYHDIDEKNHGSGELNPA---DGTYLHEFRMHEGVDTSFVKFDRKPDQVDDNPYDRALPPRDMLYVGWTEPGEWFNITVNAAKTETYTADFLYTSNRGATISIDVN 150          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|499843138|ref|WP_011523872.1| (hypothetical protein [Candidatus Koribacter versatilis] >gi|94552147|gb|ABF42071.1| hypothetical protein Acid345_3070 [Candidatus Koribacter versatilis Ellin345])

HSP 1 Score: 95.5153 bits (236), Expect = 8.462e-20
Identity = 64/163 (39.26%), Postives = 79/163 (48.47%), Query Frame = 0
Query:    8 IIMLVMASCQIGAGI-----QSLYGTSPFADEKMQ-GPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164
             I   +A+  I A +      S Y  SP+ D + Q G Q IPGKV+ A++D GG+ VAYH  D  NHGS ELNP    D  Y N FR  EG   SYTK        D    N    P D  Y GW     W  V++ V + G Y      TSN GGT+ + V+
Sbjct:    6 FISFFVAASMIPATLFSQSPSSEYQGSPYHDSRYQAGAQKIPGKVFCAYYDLGGEGVAYHDTDPQNHGSGELNPA---DGSYLNEFRIHEGVDISYTKFNRKPNLIDDNPFNKVVPPADLPYVGWTEPSEWFNVTVEVAQTGTYAADFLYTSNRGGTISIDVN 165          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|1110563584|emb|SHG66032.1| (Carbohydrate binding module (family 6) [Chryseolinea serpens])

HSP 1 Score: 95.1301 bits (235), Expect = 1.048e-19
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 0
Query:   40 QNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164
            Q+IPG+V   ++D GG+ VAYH  D VN+GS +LNP  G    Y N FR +EG   SYTK    G   D    N     +DQ+Y GW   G W+  +L ++E G YTV L  TS+  GT+ L +D
Sbjct:   33 QSIPGRVQCEFYDEGGEGVAYHDADAVNNGSGKLNPANG---TYLNEFRMNEGVDISYTK----GKDIDNNPYNTVAPEMDQLYVGWTQPGEWIHYTLQIKEAGTYTVGLMYTSHDDGTIALDLD 150          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|1180652749|ref|WP_084137936.1| (hypothetical protein [Chryseolinea serpens])

HSP 1 Score: 94.7449 bits (234), Expect = 1.127e-19
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 0
Query:   40 QNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164
            Q+IPG+V   ++D GG+ VAYH  D VN+GS +LNP  G    Y N FR +EG   SYTK    G   D    N     +DQ+Y GW   G W+  +L ++E G YTV L  TS+  GT+ L +D
Sbjct:   26 QSIPGRVQCEFYDEGGEGVAYHDADAVNNGSGKLNPANG---TYLNEFRMNEGVDISYTK----GKDIDNNPYNTVAPEMDQLYVGWTQPGEWIHYTLQIKEAGTYTVGLMYTSHDDGTIALDLD 143          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|557347130|gb|ESQ86709.1| (hypothetical protein ABAC460_22545 [Asticcacaulis sp. AC460])

HSP 1 Score: 96.6709 bits (239), Expect = 9.721e-19
Identity = 61/163 (37.42%), Postives = 82/163 (50.31%), Query Frame = 0
Query:    4 RMRNIIMLVMASCQI-GAGIQSLYGTSPFADEKMQG-PQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164
            R+  +++ VM++    G  + +      F D +  G  Q IPG V  A++D GG+ VAYH  D VNHGS  LNP   +D  Y + FR  EG   S+TK  N     D    N    P DQ+Y GW   G W  +++ V   GDY   L  TS  GGT+ + VD
Sbjct:   10 RLAWLLVAVMSAFAAPGFAVGADRAGIAFGDSRYTGGAQEIPGTVHAAYYDAGGEGVAYHDTDSVNHGSGALNP---LDGSYLHAFRAGEGVDISFTKFGNPSVAVDDSPFNRVVPPADQLYVGWTEPGEWFNLTVDVAHDGDYVGDLLYTSQRGGTIAIDVD 169          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|1175168768|ref|WP_081716689.1| (hypothetical protein [Asticcacaulis sp. AC460])

HSP 1 Score: 96.2857 bits (238), Expect = 1.372e-18
Identity = 57/135 (42.22%), Postives = 70/135 (51.85%), Query Frame = 0
Query:   31 FADEKMQG-PQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164
            F D +  G  Q IPG V  A++D GG+ VAYH  D VNHGS  LNP   +D  Y + FR  EG   S+TK  N     D    N    P DQ+Y GW   G W  +++ V   GDY   L  TS  GGT+ + VD
Sbjct:   20 FGDSRYTGGAQEIPGTVHAAYYDAGGEGVAYHDTDSVNHGSGALNP---LDGSYLHAFRAGEGVDISFTKFGNPSVAVDDSPFNRVVPPADQLYVGWTEPGEWFNLTVDVAHDGDYVGDLLYTSQRGGTIAIDVD 151          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|1113279098|gb|OJV44199.1| (hypothetical protein BGO25_10605 [Acidobacteriales bacterium 59-55])

HSP 1 Score: 90.8929 bits (224), Expect = 3.583e-18
Identity = 57/146 (39.04%), Postives = 75/146 (51.37%), Query Frame = 0
Query:   26 YGTSPFADEKM-QGPQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQVPIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVDDYASHG 170
            Y  +P+ D+    G Q+IPG+V  A +DRGG+ VAYH  +  N GS  LNP    D  Y N FR DEG   SYTK  N     D    +  Q P  Q+Y GW   G W  V++     G Y+  L  TSN GG + + ++  A+ G
Sbjct:   15 YKGTPYKDDHHPNGAQSIPGRVECALYDRGGEGVAYHDTEAKNLGSGTLNPA---DGTYLNQFRMDEGVDISYTKFHNAPDRIDDNPYDLVQPPDHQLYVGWTEPGEWFNVTVQAARAGVYSADLLYTSNRGGAISVDLNGKAASG 157          
BLAST of EWM25981.1 vs. NCBI_GenBank
Match: gi|522207939|ref|WP_020715406.1| (hypothetical protein [Acidobacteriaceae bacterium KBS 89])

HSP 1 Score: 90.5077 bits (223), Expect = 4.261e-18
Identity = 57/143 (39.86%), Postives = 76/143 (53.15%), Query Frame = 0
Query:   26 YGTSPFADEKMQG-PQNIPGKVWMAWFDRGGQNVAYHSYDDVNHGSCELNPCTGVDAVYKNVFRKDEGASTSYTKPPNGGWPGDRFAGNNSQV---PIDQMYWGWNALGNWVRVSLLVQEPGDYTVSLFGTSNSGGTLLLTVD 164
            Y  +P+ D    G  Q IPG+V  A++D GG+ VAYH  D  N+GS  LNP    D  Y N FR +EG  TSYTK        D+   N  +V   P + +Y GW   G W ++++ V   G Y+  L  TSN GGT+ L V+
Sbjct:   16 YKGTPYHDNHHSGVAQAIPGQVDCAYYDLGGEGVAYHDTDAKNNGSGALNPA---DGTYLNQFRMNEGVDTSYTK------FHDQIDDNPYEVIHPPENLLYVGWTEPGEWFKITVEVAHAGIYSADLLYTSNRGGTIALDVN 149          
The following BLAST results are available for this feature:
BLAST of EWM25981.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107882|gb|EWM25981.1|0.000e+0100.00endoglucanase a [Nannochloropsis gaditana][more]
gi|917371914|ref|WP_051978626.1|8.955e-2341.22hypothetical protein [Edaphobacter aggregans][more]
gi|959928013|ref|WP_058186623.1|1.506e-2035.95hypothetical protein [Terracidiphilus gabretensis][more]
gi|499843138|ref|WP_011523872.1|8.462e-2039.26hypothetical protein [Candidatus Koribacter versat... [more]
gi|1110563584|emb|SHG66032.1|1.048e-1943.20Carbohydrate binding module (family 6) [Chryseolin... [more]
gi|1180652749|ref|WP_084137936.1|1.127e-1943.20hypothetical protein [Chryseolinea serpens][more]
gi|557347130|gb|ESQ86709.1|9.721e-1937.42hypothetical protein ABAC460_22545 [Asticcacaulis ... [more]
gi|1175168768|ref|WP_081716689.1|1.372e-1842.22hypothetical protein [Asticcacaulis sp. AC460][more]
gi|1113279098|gb|OJV44199.1|3.583e-1839.04hypothetical protein BGO25_10605 [Acidobacteriales... [more]
gi|522207939|ref|WP_020715406.1|4.261e-1839.86hypothetical protein [Acidobacteriaceae bacterium ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4694rna4694Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications