EWM26019.1, cds4662 (CDS) Nannochloropsis gaditana

Overview
NameEWM26019.1
Unique Namecds4662
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:29819..29899 +
Alignment locationCM002464.1:30195..30257 +
Alignment locationCM002464.1:30410..30549 +
Alignment locationCM002464.1:30646..30772 +
Alignment locationCM002464.1:30953..31054 +
Alignment locationCM002464.1:31240..31330 +
Alignment locationCM002464.1:31402..31457 +
Alignment locationCM002464.1:31585..31642 +
Alignment locationCM002464.1:31809..31903 +
Alignment locationCM002464.1:32047..32157 +
Alignment locationCM002464.1:32292..32366 +
Alignment locationCM002464.1:32496..32582 +
Alignment locationCM002464.1:32701..32757 +
Alignment locationCM002464.1:32852..32935 +
Alignment locationCM002464.1:33099..33239 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26019.1
Productcop9 signalosome complex subunit 2
Orig transcript idgnl|cribi|Naga_100150g11.10695.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:29819..29899 +
CM002464.1supercontigCM002464.1:30195..30257 +
CM002464.1supercontigCM002464.1:30410..30549 +
CM002464.1supercontigCM002464.1:30646..30772 +
CM002464.1supercontigCM002464.1:30953..31054 +
CM002464.1supercontigCM002464.1:31240..31330 +
CM002464.1supercontigCM002464.1:31402..31457 +
CM002464.1supercontigCM002464.1:31585..31642 +
CM002464.1supercontigCM002464.1:31809..31903 +
CM002464.1supercontigCM002464.1:32047..32157 +
CM002464.1supercontigCM002464.1:32292..32366 +
CM002464.1supercontigCM002464.1:32496..32582 +
CM002464.1supercontigCM002464.1:32701..32757 +
CM002464.1supercontigCM002464.1:32852..32935 +
CM002464.1supercontigCM002464.1:33099..33239 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR011991WHTH_DNA-bd_dom
IPR000717PCI_dom
IPR013143PAM
Homology
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|585107934|gb|EWM26019.1| (cop9 signalosome complex subunit 2 [Nannochloropsis gaditana])

HSP 1 Score: 944.495 bits (2440), Expect = 0.000e+0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0
Query:    1 MSDDEGEVYAYSDDEGSDVDYAYGSDEDQDEQDHEIVNSYYEGEEFMQQNQLPEALEKMERVVGVAAERGGDDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATGSIVAQTYAKTLASTEGNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLRPEGRSSSGKHAALARWADALQAGTGSGKCDEGDDGWAH 455
            MSDDEGEVYAYSDDEGSDVDYAYGSDEDQDEQDHEIVNSYYEGEEFMQQNQLPEALEKMERVVGVAAERGGDDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATGSIVAQTYAKTLASTEGNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLRPEGRSSSGKHAALARWADALQAGTGSGKCDEGDDGWAH
Sbjct:    1 MSDDEGEVYAYSDDEGSDVDYAYGSDEDQDEQDHEIVNSYYEGEEFMQQNQLPEALEKMERVVGVAAERGGDDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATGSIVAQTYAKTLASTEGNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLRPEGRSSSGKHAALARWADALQAGTGSGKCDEGDDGWAH 455          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|298708899|emb|CBJ30856.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 357.836 bits (917), Expect = 8.635e-118
Identity = 175/347 (50.43%), Postives = 244/347 (70.32%), Query Frame = 0
Query:   97 MLAAYERLLSYTSAVTRNESTDAINSVLDTISGATG-SIVAQTYAKTLAST--EGNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLR-PEGRSSSGKHAALARWADALQA 439
            M   Y+ LL++ S+VTRNES+D++N +LDT+S +    +V+Q Y  TL++   EGNER+ F T ++ AK YL   D  +V   I+ LH  CR  +G DD SK   L+EVY + I  CT T +   MKE+ P+T+ LNA+V DPRIMG+IRE+GGK++M    W  AY+EF EGFR YQEAGN  AK CLKY  L+N+L  S INPFAA EAKV+Q+++E++AMM+LR+AY+ NDL +FERTL  K N I +D F+  Y+  LR+R+RE VL+ + +PY K+T+  +A EL L   E+E LL+DLILD+R+ G+IDQI GF+LL  P   ++S KH A+ RW+++L++
Sbjct:    1 MQQRYKELLTHVSSVTRNESSDSVNGILDTVSVSEDLRMVSQMYETTLSALKEEGNERMWFNTYVKLAKVYLQIPDYVKVQTTIDTLHDSCRLANGQDDPSKGNQLLEVYGITIQLCTATNNNILMKEVYPKTIDLNASVEDPRIMGVIREQGGKMYMSMGNWGQAYNEFYEGFRNYQEAGNPNAKVCLKYVVLANMLDLSRINPFAAREAKVFQEEKEIVAMMDLRMAYEGNDLAKFERTLHDKRNRITEDPFVMTYLGPLRQRIRESVLIHLCKPYKKITMGFMAGELSLKTAEVEKLLIDLILDRRLNGKIDQIEGFLLLDGPLETTTSRKHDAMERWSNSLRS 347          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|669159168|ref|XP_008615146.1| (hypothetical protein SDRG_10908 [Saprolegnia diclina VS20] >gi|530733063|gb|EQC31305.1| hypothetical protein SDRG_10908 [Saprolegnia diclina VS20])

HSP 1 Score: 360.147 bits (923), Expect = 3.242e-117
Identity = 193/424 (45.52%), Postives = 273/424 (64.39%), Query Frame = 0
Query:   24 GSDEDQDEQDHEIVNSYYEGEEFMQQNQLP-EALEKMERVVGVAAE---RGGDDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATGSIVAQTYAKTLAS--TEGNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGG--FVLLRPEGRSSSGKHA-ALARWADALQ 438
            G +E  DE   +I N++YE ++   +N  P  AL+   +VV + +E   +  D+ ++ F  LE IV L   LG+ ++M+  Y  +L     VTRNE TD+INS+LD +S  + +I+++ Y  TL +     N+RL F T I+  K YL  GD   + RV+E LH  C+ PDGSDD SKAT L++VY LEI  CT T D  +MK + P+TL L+AA+SDPRIMG+IREEGGK++M +  W DAY+EF E FR YQEAGN+RAKQCLKY  L+N+LA+S INPF + EAKV++D  E+ AM+ LR AYD+ND+ +FE+ L++  N I  D  M  Y++ L R +R QV+L +  PY  + LA +A ++ +  E++E L+V+LI D R+  +IDQ  G  F L     R ++ K   ALA+W  ALQ
Sbjct:   25 GEEEMVDETAVKIENTFYEADDC--KNSDPTRALQLFLQVVSLQSESTSKEKDNTKYRFMSLENIVKLCAHLGKPDEMVGHYAEMLQLLPNVTRNECTDSINSILDIVSSLSATIISKMYTMTLDALRVASNDRLWFQTNIKLGKLYLELGDYAPLHRVLEELHASCKLPDGSDDTSKATSLLDVYCLEIQLCTATNDTKKMKVLYPKTLGLDAAISDPRIMGVIREEGGKMYMSESLWMDAYNEFFESFRNYQEAGNARAKQCLKYVVLANMLASSDINPFDSREAKVFKDVDEINAMLLLRAAYDSNDIQQFEKILKNPKNQISSDPLMKRYLDPLLRNIRSQVILKLVGPYQSVLLASIASDMNIPVEDVELLMVELINDGRLHRKIDQQRGVLFSLEHQRSRETNVKTVEALAKWTSALQ 446          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|813118890|ref|XP_012196093.1| (hypothetical protein SPRG_02152 [Saprolegnia parasitica CBS 223.65] >gi|641539536|gb|KDO33345.1| hypothetical protein SPRG_02152 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 356.681 bits (914), Expect = 7.923e-116
Identity = 190/424 (44.81%), Postives = 268/424 (63.21%), Query Frame = 0
Query:   24 GSDEDQDEQDHEIVNSYYEGEEFMQQNQLP-EALEKMERVVGVAAERGG---DDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATGSIVAQTYAKTLAS--TEGNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLLRPEGRSSSGKHA---ALARWADALQ 438
            G +E  DE   +I N++YE ++   +N  P  AL+   +VV + +E      D  ++ F  LE IV L   LG+ ++M+  Y  +L     VTRNE TD+INS+LD +S  + +I+++ Y  TL +     N+RL F T I+  K YL  GD   + RV+E LH  C+ PDGSDD SKAT L++VY LEI  CT T D  +MK + P+TL L+AA+SDPRIMG+IREEGGK++M +  W DAY+EF E FR YQEAGN+RAKQCLKY  L+N+LA+S INPF + EAKV++D  E+ AM+ LR AYD+ND+ +FE+ L++  N I  D  M  Y+  L R +R QV+L +  PY  + L+ +A ++ +  E++E L+V+LI D R+  +IDQ  G +  +   RS         ALA+W  ALQ
Sbjct:   25 GEEEMIDETAVKIENTFYEADDC--KNSDPTRALQLFLQVVSLQSESNSKEKDHTKYRFMSLENIVKLCAHLGKPDEMVGHYAEMLQLLPNVTRNECTDSINSILDIVSSLSATIISKMYTMTLDALRVASNDRLWFQTNIKLGKLYLELGDYAPLHRVLEELHASCKLPDGSDDTSKATSLLDVYCLEIQLCTATNDTKKMKVLYPKTLGLDAAISDPRIMGVIREEGGKMYMSESLWMDAYNEFFESFRNYQEAGNARAKQCLKYVVLANMLASSDINPFDSREAKVFKDVDEINAMLLLRAAYDSNDIQQFEKILKNPKNQISSDPLMKRYLNPLLRNIRSQVILKLVGPYQSVLLSSIASDMNIPVEDVELLMVELINDGRLHRKIDQQRGVLFSQEHQRSRETNVKTVEALAKWTQALQ 446          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|1173942779|gb|OQR91725.1| (COP9 signalosome complex subunit [Achlya hypogyna])

HSP 1 Score: 352.443 bits (903), Expect = 4.406e-114
Identity = 190/425 (44.71%), Postives = 275/425 (64.71%), Query Frame = 0
Query:   24 GSDEDQDEQDHEIVNSYYEGEEFMQQNQLP-EALEKMERVVGVAAERGGDD---LRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATGSIVAQTYAKTLAS--TEGNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGG--FVLLRPEGRSSSGKHA-ALARWADALQA 439
            G +E  DE   +I N++YE ++   +N  P  AL+   +V+ + A+   D+    ++ F  LE IV L   LG+ ++M+A YE +L     VTRNE TD+INS+LD +S  + +I+++ Y  TL +  T  N+RL F T I+  K YL  G+   + RV+E+L   C+  DGSDD SKAT L++VY LEI  CT T D A+MK + P+TL L+AA+SDPRIMG+IREEGGK++M +  WS+AY+EF E FR YQEAGN+RAKQCLKY  L+N+LA+S INPF + EAKV++D  E+ AM+ LR AYD ND+ +FE+ L++  N I  D  M  Y++ L R +R  V+L +  PY  + L+ +A+++ +S +++E L+V+LI D R+  +IDQ  G  + L   + R    K   ALA+W  AL A
Sbjct:   25 GEEEMIDETAVKIENTFYEADDC--KNTDPTRALQLFLQVISLQADAPKDNKDHTKYQFMSLENIVKLCANLGKPDEMIAHYEEMLQLLPNVTRNECTDSINSILDIVSSLSSTIISKMYTITLQALRTANNDRLWFQTNIKLGKLYLELGEYANLHRVLEQLQASCKLADGSDDTSKATSLLDVYCLEIQLCTATNDTAKMKVLYPKTLGLDAAISDPRIMGVIREEGGKMYMSEGLWSEAYNEFFESFRNYQEAGNARAKQCLKYVVLANMLASSDINPFDSREAKVFKDVDEINAMLLLRAAYDTNDIQQFEKILKNPKNQISSDPLMKRYLDPLLRNIRCHVILKLVGPYQSVLLSSIAQDMNISVQDVELLMVELINDGRLHRKIDQQNGVLYSLEHQKAREIGSKTVEALAKWTQALSA 447          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|301095465|ref|XP_002896833.1| (COP9 signalosome complex subunit, putative [Phytophthora infestans T30-4] >gi|262108716|gb|EEY66768.1| COP9 signalosome complex subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 345.125 bits (884), Expect = 4.902e-111
Identity = 192/461 (41.65%), Postives = 281/461 (60.95%), Query Frame = 0
Query:    1 MSDDEGEVYAY-------SDDEGSDVDYAYGSDEDQDEQDHE----IVNSYYEGEEFMQQNQLPEALEKMERVVGVAAERGG-DDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATG--------SIVAQTYAKTLASTE--GNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLL--RPEGRSSSGKHAALARWADAL 437
            MSD E   Y Y       SDD+GS VD   G    Q     E    + N++YE E+F Q+  L +ALE  +RVV +  E    ++ +W F+ LE +V +     + E ML  YE++L + + VTRNEST++I+S+LD +S ATG           ++ Y  TL   +   N+RL F+  ++  K YL      ++ R++ +L+  C+ PDG  D SKAT L+EVYALEI  C  T + A+M+ I P+TL L+AAV+DPRIMG+IREEGGK+++ + +W  AY+EF E FR YQEAGN+RA QCLKY  L+N+LA+S INPF + EAKVYQD  E+ AM+ LR AY+AND+ +FE+TL++    +L D  M  Y+  L R +R QV+  + +PY  + L  ++K + ++  ++E + V LI +  +  +IDQ  G ++L  R + R +S  + AL RW  AL
Sbjct:    1 MSDSEEYEYEYDSDEQFDSDDQGSAVDGEEGEAAQQRSAAREAQIALENTFYEAEDFRQRGDLAQALEYFQRVVALEKEATPLEERKWSFQSLEHVVKICVSRRQWEGMLRHYEQMLEHLAFVTRNESTESISSILDVVSSATGMEKEKDSAKYTSKMYELTLDKLKDVNNDRLWFSMNVKLGKLYLDMQAFDQLQRLLNQLYDYCQTPDGVQDHSKATSLLEVYALEIQLCVATKNSAKMRVIYPKTLDLDAAVADPRIMGVIREEGGKMYLEEKEWMLAYNEFFESFRNYQEAGNARATQCLKYVVLANMLASSDINPFDSREAKVYQDVEEIGAMLLLRGAYEANDIVQFEKTLKNPKYKLLSDPIMKRYLNPLLRNIRCQVMKKLVRPYQAIRLESLSKSMNITAADVEDIAVALIQNLELDAKIDQSRGLLVLQTRQKARDASKMYDALDRWTRAL 461          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|567968750|gb|ETK93870.1| (hypothetical protein L915_03003 [Phytophthora parasitica])

HSP 1 Score: 344.739 bits (883), Expect = 5.703e-111
Identity = 189/461 (41.00%), Postives = 283/461 (61.39%), Query Frame = 0
Query:    1 MSDDEGEVYAY-------SDDEGSDVDYAYGSDEDQDEQDHE----IVNSYYEGEEFMQQNQLPEALEKMERVVGVAAERGG-DDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATG--------SIVAQTYAKTLASTE--GNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLL--RPEGRSSSGKHAALARWADAL 437
            MSD E   Y Y       SDD+GS +D   G    Q     E    + N++YE E+F Q+  L +ALE  +RVV +  E    ++ +W F+ LE +V +     + E+ML  YE++L + + VTRNEST++I+S+LD +S ATG           ++ Y  TL   +   N+RL F+  ++  K YL      ++ +++ +L+  C+ PDG  D SKAT L+EVYALEI  C  T + A+M+ I P+TL L+AAV+DPRIMG+IREEGGK+++ + +W  AY+EF E FR YQEAGN+RAKQCLKY  L+N+LA+S INPF + EAKVYQD  E+ AM+ LR AY+AND+ +FE+ L++    +L D  M  Y+  L R +R QV+  + +PY  + +  ++K + ++ E++E + V LI +  +  +IDQ  G ++L  R + R +S  + +L RW  AL
Sbjct:    1 MSDSEEYEYEYDSDEQFDSDDQGSAIDGEDGEAAQQRNAAREAQIALENTFYEAEDFRQRGDLTQALEYFQRVVALEKEATPLEERKWSFQALEHVVKICVSRRQWEEMLRNYEQMLEHLAFVTRNESTESISSILDVVSNATGMEKEKDSTKYTSKMYELTLDKLKDVNNDRLWFSMNVKLGKLYLDMQQFDQLQKLLSQLYDYCQTPDGVQDHSKATSLLEVYALEIQLCVATKNSAKMRLIYPKTLDLDAAVADPRIMGVIREEGGKMYLEEKEWMLAYNEFFESFRNYQEAGNARAKQCLKYVVLANMLASSDINPFDSREAKVYQDVEEIGAMLLLRGAYEANDVVQFEKILKNPKYKLLSDPIMKRYLNPLLRNIRCQVMKKLVRPYQAIRIDSLSKSMNITSEDVEDIAVALIQNLELDAKIDQSRGLLVLQTRQKARDASKMYDSLDRWTQAL 461          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|567997172|gb|ETL47261.1| (hypothetical protein L916_02976 [Phytophthora parasitica])

HSP 1 Score: 344.354 bits (882), Expect = 7.394e-111
Identity = 189/461 (41.00%), Postives = 283/461 (61.39%), Query Frame = 0
Query:    1 MSDDEGEVYAY-------SDDEGSDVDYAYGSDEDQDEQDHE----IVNSYYEGEEFMQQNQLPEALEKMERVVGVAAERGG-DDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATG--------SIVAQTYAKTLASTE--GNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLL--RPEGRSSSGKHAALARWADAL 437
            MSD E   Y Y       SDD+GS +D   G    Q     E    + N++YE E+F Q+  L +ALE  +RVV +  E    ++ +W F+ LE +V +     + E+ML  YE++L + + VTRNEST++I+S+LD +S ATG           ++ Y  TL   +   N+RL F+  ++  K YL      ++ +++ +L+  C+ PDG  D SKAT L+EVYALEI  C  T + A+M+ I P+TL L+AAV+DPRIMG+IREEGGK+++ + +W  AY+EF E FR YQEAGN+RAKQCLKY  L+N+LA+S INPF + EAKVYQD  E+ AM+ LR AY+AND+ +FE+ L++    +L D  M  Y+  L R +R QV+  + +PY  + +  ++K + ++ E++E + V LI +  +  +IDQ  G ++L  R + R +S  + +L RW  AL
Sbjct:    1 MSDSEEYEYEYDSDEQFDSDDQGSAIDGEDGEAAQQRNAAREAQIALENTFYEAEDFRQRGDLTQALEYFQRVVALEKEATPLEERKWSFQALEHVVKICVSRRQWEEMLRNYEQMLEHLAFVTRNESTESISSILDVVSNATGMEKEKDSTKYTSKMYELTLDKLKDVNNDRLWFSMNVKLGKLYLDMQQFDQLQKLLSQLYDYCQTPDGVQDHSKATSLLEVYALEIQLCVATKNSAKMRLIYPKTLDLDAAVADPRIMGVIREEGGKMYLEEKEWMLAYNEFFESFRNYQEAGNARAKQCLKYVVLANMLASSDINPFDSREAKVYQDVEEIGAMLLLRGAYEANDVVQFEKILKNPKYKLLSDPIMKRYLNPLLRNIRCQVMKKLVRPYQAIRIDSLSKSMNITSEDVEDIAVALIQNLELDAKIDQSRGLLVLQTRQKARDASKMYDSLDRWTQAL 461          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|568026388|gb|ETM00377.1| (hypothetical protein L917_02892 [Phytophthora parasitica])

HSP 1 Score: 343.969 bits (881), Expect = 1.034e-110
Identity = 189/461 (41.00%), Postives = 283/461 (61.39%), Query Frame = 0
Query:    1 MSDDEGEVYAY-------SDDEGSDVDYAYGSDEDQDEQDHE----IVNSYYEGEEFMQQNQLPEALEKMERVVGVAAERGG-DDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATG--------SIVAQTYAKTLASTE--GNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLL--RPEGRSSSGKHAALARWADAL 437
            MSD E   Y Y       SDD+GS +D   G    Q     E    + N++YE E+F Q+  L +ALE  +RVV +  E    ++ +W F+ LE +V +     + E+ML  YE++L + + VTRNEST++I+S+LD +S ATG           ++ Y  TL   +   N+RL F+  ++  K YL      ++ +++ +L+  C+ PDG  D SKAT L+EVYALEI  C  T + A+M+ I P+TL L+AAV+DPRIMG+IREEGGK+++ + +W  AY+EF E FR YQEAGN+RAKQCLKY  L+N+LA+S INPF + EAKVYQD  E+ AM+ LR AY+AND+ +FE+ L++    +L D  M  Y+  L R +R QV+  + +PY  + +  ++K + ++ E++E + V LI +  +  +IDQ  G ++L  R + R +S  + +L RW  AL
Sbjct:    1 MSDSEEYEYEYDSDEQFDSDDQGSAIDGEDGEAAQQRNAAREAQIALENTFYEAEDFRQRGDLTQALEYFQRVVALEKEATPLEERKWSFQALEHVVKICVSRRQWEEMLRNYEQMLEHLAFVTRNESTESISSILDVVSSATGMEKEKDSAKYTSKMYELTLDKLKDVNNDRLWFSMNVKLGKLYLDMQQFDQLQKLLSQLYDYCQTPDGVQDHSKATSLLEVYALEIQLCVATKNSAKMRLIYPKTLDLDAAVADPRIMGVIREEGGKMYLEEKEWMLAYNEFFESFRNYQEAGNARAKQCLKYVVLANMLASSDINPFDSREAKVYQDVEEIGAMLLLRGAYEANDVVQFEKILKNPKYKLLSDPIMKRYLNPLLRNIRCQVMKKLVRPYQAIRIDSLSKSMNITSEDVEDIAVALIQNLELDAKIDQSRGLLVLQTRQKARDASKMYDSLDRWTRAL 461          
BLAST of EWM26019.1 vs. NCBI_GenBank
Match: gi|570958848|gb|ETP23827.1| (hypothetical protein F441_03103 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 343.969 bits (881), Expect = 1.127e-110
Identity = 189/461 (41.00%), Postives = 283/461 (61.39%), Query Frame = 0
Query:    1 MSDDEGEVYAY-------SDDEGSDVDYAYGSDEDQDEQDHE----IVNSYYEGEEFMQQNQLPEALEKMERVVGVAAERGG-DDLRWCFKGLECIVMLLFKLGEHEKMLAAYERLLSYTSAVTRNESTDAINSVLDTISGATG--------SIVAQTYAKTLASTE--GNERLHFTTMIRQAKAYLAQGDLKEVGRVIERLHQLCRNPDGSDDESKATYLMEVYALEISYCTHTCDMARMKEILPRTLKLNAAVSDPRIMGIIREEGGKLHMRQCQWSDAYSEFNEGFRAYQEAGNSRAKQCLKYAALSNILANSSINPFAATEAKVYQDDREVMAMMELRIAYDANDLPRFERTLEHKPNHILDDSFMAVYIEELRRRMREQVLLSITQPYSKMTLAHVAKELRLSREEIESLLVDLILDKRIKGQIDQIGGFVLL--RPEGRSSSGKHAALARWADAL 437
            MSD E   Y Y       SDD+GS +D   G    Q     E    + N++YE E+F Q+  L +ALE  +RVV +  E    ++ +W F+ LE +V +     + E+ML  YE++L + + VTRNEST++I+S+LD +S ATG           ++ Y  TL   +   N+RL F+  ++  K YL      ++ +++ +L+  C+ PDG  D SKAT L+EVYALEI  C  T + A+M+ I P+TL L+AAV+DPRIMG+IREEGGK+++ + +W  AY+EF E FR YQEAGN+RAKQCLKY  L+N+LA+S INPF + EAKVYQD  E+ AM+ LR AY+AND+ +FE+ L++    +L D  M  Y+  L R +R QV+  + +PY  + +  ++K + ++ E++E + V LI +  +  +IDQ  G ++L  R + R +S  + +L RW  AL
Sbjct:    1 MSDSEEYEYEYDSDEQFDSDDQGSAIDGEDGEAAQQRNAAREAQIALENTFYEAEDFRQRGDLTQALEYFQRVVALEKEATPLEERKWSFQALEHVVKICVSRRQWEEMLRNYEQMLEHLAFVTRNESTESISSILDVVSNATGMEKEKDSAKYTSKMYELTLDKLKDVNNDRLWFSMNVKLGKLYLDMQQFDQLQKLLSQLYDYCQTPDGVQDHSKATSLLEVYALEIQLCVATKNSAKMRLIYPKTLDLDAAVADPRIMGVIREEGGKMYLEEKEWMLAYNEFFESFRNYQEAGNARAKQCLKYVVLANMLASSDINPFDSREAKVYQDVEEIGAMLLLRGAYEANDVVQFEKILKNPKYKLLSDPIMKRYLNPLLRNIRCQVMKKLVRPYQAIRIDSLSKSMNITSEDVEDIAVALIQNLELDAKIDQSRGLLVLQTRQKARDASKMYDSLDRWTRAL 461          
The following BLAST results are available for this feature:
BLAST of EWM26019.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107934|gb|EWM26019.1|0.000e+0100.00cop9 signalosome complex subunit 2 [Nannochloropsi... [more]
gi|298708899|emb|CBJ30856.1|8.635e-11850.43conserved unknown protein [Ectocarpus siliculosus][more]
gi|669159168|ref|XP_008615146.1|3.242e-11745.52hypothetical protein SDRG_10908 [Saprolegnia dicli... [more]
gi|813118890|ref|XP_012196093.1|7.923e-11644.81hypothetical protein SPRG_02152 [Saprolegnia paras... [more]
gi|1173942779|gb|OQR91725.1|4.406e-11444.71COP9 signalosome complex subunit [Achlya hypogyna][more]
gi|301095465|ref|XP_002896833.1|4.902e-11141.65COP9 signalosome complex subunit, putative [Phytop... [more]
gi|567968750|gb|ETK93870.1|5.703e-11141.00hypothetical protein L915_03003 [Phytophthora para... [more]
gi|567997172|gb|ETL47261.1|7.394e-11141.00hypothetical protein L916_02976 [Phytophthora para... [more]
gi|568026388|gb|ETM00377.1|1.034e-11041.00hypothetical protein L917_02892 [Phytophthora para... [more]
gi|570958848|gb|ETP23827.1|1.127e-11041.00hypothetical protein F441_03103 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4674rna4674Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications