EWM26016.1, cds4653 (CDS) Nannochloropsis gaditana

Overview
NameEWM26016.1
Unique Namecds4653
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002464.1:9083..9210 +
Alignment locationCM002464.1:9488..9596 +
Alignment locationCM002464.1:9737..9997 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26016.1
Producthormone-sensitive lipase
Orig transcript idgnl|cribi|Naga_100150g1.10692.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002464.1supercontigCM002464.1:9083..9210 +
CM002464.1supercontigCM002464.1:9488..9596 +
CM002464.1supercontigCM002464.1:9737..9997 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR013094AB_hydrolase_3
IPR029058AB_hydrolase
Homology
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|585107931|gb|EWM26016.1| (hormone-sensitive lipase [Nannochloropsis gaditana])

HSP 1 Score: 320.857 bits (821), Expect = 9.138e-111
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
Query:    1 MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEGVKGGAGGMDGMIVETGLMQGETGEEVACDVGAAVGGEGLLGIATEEE 165
            MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEGVKGGAGGMDGMIVETGLMQGETGEEVACDVGAAVGGEGLLGIATEEE
Sbjct:    1 MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEGVKGGAGGMDGMIVETGLMQGETGEEVACDVGAAVGGEGLLGIATEEE 165          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|553185810|ref|XP_005854311.1| (hormone-sensitive lipase, partial [Nannochloropsis gaditana CCMP526] >gi|422294750|gb|EKU22050.1| hormone-sensitive lipase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 234.572 bits (597), Expect = 6.365e-77
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query:    1 MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEG 118
            MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEG
Sbjct:   26 MADPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYGLDRAATAIMEEAGRFLAREGGGDEG 143          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|219111379|ref|XP_002177441.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411976|gb|EEC51904.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 102.064 bits (253), Expect = 3.862e-22
Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 0
Query:    3 DPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGL 91
            DP+LP GL +A++DAYLPS +    ++PL+SP +A D  L RFPPT +  G  DPLLDD+V F+ +L ++GV S LR   +LPH +LGL
Sbjct:  640 DPVLPSGLISAISDAYLPSESGISKKNPLVSPIYAADDCLRRFPPTLLFAGSNDPLLDDSVAFNKKLCYLGVESELRAVANLPHAYLGL 728          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|1210523057|dbj|GAX18108.1| (hormone-sensitive lipase [Fistulifera solaris])

HSP 1 Score: 95.9005 bits (237), Expect = 6.012e-20
Identity = 45/89 (50.56%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    3 DPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGL 91
            DP+LP GL +A+ +AY   +      DPL+SPYFA D +L RFPPT       DPLLDD V  + RLR +GV S LR  ++LPH +LGL
Sbjct:  622 DPVLPHGLISAICNAYGAGIN---KTDPLVSPYFAADSVLERFPPTLFFASSNDPLLDDAVALNQRLRSLGVESYLRAAQNLPHAYLGL 707          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|1210531392|dbj|GAX10060.1| (hormone-sensitive lipase [Fistulifera solaris])

HSP 1 Score: 94.3597 bits (233), Expect = 2.109e-19
Identity = 44/89 (49.44%), Postives = 57/89 (64.04%), Query Frame = 0
Query:    3 DPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGL 91
            DP+LP GL +A+++AY   +      DPL+SPYFA D +L  FPPT       DPLLDD V  + RLR +GV S LR  ++LPH +LGL
Sbjct:  621 DPVLPHGLISAISNAYGAGMN---KTDPLVSPYFAADSVLEHFPPTLFFASSNDPLLDDAVALNQRLRSLGVESYLRAAQNLPHAYLGL 706          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|1072231904|gb|OEU16636.1| (Abhydrolase_3-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 84.7297 bits (208), Expect = 1.423e-17
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    3 DPLLPLGLFTAVADAYLPSLTTDPSRDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGL 91
            DP+LP  L +A++DAYLP       +DPL SP++A D +L RFPPT +     DPLLDD+V F+ RL  +GV S L    ++PH +LGL
Sbjct:   64 DPVLPNALISAISDAYLPPGFN--KKDPLASPHYAPDSVLRRFPPTLLFASSKDPLLDDSVTFNERLSVLGVDSELMAVNNVPHAYLGL 150          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|953503521|emb|CEG35531.1| (hormone-sensitive lipase [Plasmopara halstedii])

HSP 1 Score: 88.5817 bits (218), Expect = 1.944e-17
Identity = 50/112 (44.64%), Postives = 63/112 (56.25%), Query Frame = 0
Query:    3 DPLLPLGLFTAVADAYLPSLTTDPS-----RDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYG--LDRAATAIMEEAGR 107
            DP+LP G+       Y PS            DP +SP  A D LL +FPPT + VG  DPLLDD+VDF  RL ++ VPS+L++   L HGFL +YG  +  A TAI E   R
Sbjct:  595 DPVLPRGILELALTTYYPSHGHSNQYKHNIHDPCVSPGLAEDSLLEKFPPTSLVVGDLDPLLDDSVDFYTRLSYLKVPSSLKIYSGLSHGFL-IYGDLVPEAQTAIDETCER 705          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|301105164|ref|XP_002901666.1| (hormone-sensitive lipase, putative [Phytophthora infestans T30-4] >gi|262100670|gb|EEY58722.1| hormone-sensitive lipase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 86.6557 bits (213), Expect = 8.333e-17
Identity = 50/112 (44.64%), Postives = 62/112 (55.36%), Query Frame = 0
Query:    3 DPLLPLGLFTAVADAYLPSLTTDPS-----RDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYG--LDRAATAIMEEAGR 107
            DP+LP G+      +Y PS            DP +SP  A D LL +FPPT + VG  DPLLDD+VDF  RL  + VPSTL++   L HGFL +YG  +  A  AI E   R
Sbjct:  595 DPVLPRGILELALTSYYPSHGHSNQYKLNIHDPCVSPGLAEDSLLEKFPPTSLVVGDLDPLLDDSVDFYTRLSFLKVPSTLKIYSGLSHGFL-IYGDLVPEAQKAIDETCER 705          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|970635157|gb|KUF80137.1| (Esterase [Phytophthora nicotianae])

HSP 1 Score: 86.2705 bits (212), Expect = 1.251e-16
Identity = 50/112 (44.64%), Postives = 62/112 (55.36%), Query Frame = 0
Query:    3 DPLLPLGLFTAVADAYLPSLTTDPS-----RDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYG--LDRAATAIMEEAGR 107
            DP+LP G+      +Y PS            DP +SP  A D LL +FPPT + VG  DPLLDD+VDF  RL  + VPSTL++   L HGFL +YG  +  A  AI E   R
Sbjct:  595 DPVLPRGILELALTSYYPSHGHSNQYKLNIHDPCVSPGLAEDSLLEKFPPTSLVVGDLDPLLDDSVDFYTRLSFLKVPSTLKIYSGLSHGFL-IYGDLVPEAQKAIDETCER 705          
BLAST of EWM26016.1 vs. NCBI_GenBank
Match: gi|675195479|ref|XP_008906624.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568093021|gb|ETN07820.1| hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 86.2705 bits (212), Expect = 1.251e-16
Identity = 50/112 (44.64%), Postives = 62/112 (55.36%), Query Frame = 0
Query:    3 DPLLPLGLFTAVADAYLPSLTTDPS-----RDPLISPYFAHDKLLSRFPPTFIGVGGFDPLLDDTVDFDCRLRHVGVPSTLRLGRDLPHGFLGLYG--LDRAATAIMEEAGR 107
            DP+LP G+      +Y PS            DP +SP  A D LL +FPPT + VG  DPLLDD+VDF  RL  + VPSTL++   L HGFL +YG  +  A  AI E   R
Sbjct:  595 DPVLPRGILELALTSYYPSHGHSNQYKLNIHDPCVSPGLAEDSLLEKFPPTSLVVGDLDPLLDDSVDFYTRLSFLKVPSTLKIYSGLSHGFL-IYGDLVPEAQKAIDETCER 705          
The following BLAST results are available for this feature:
BLAST of EWM26016.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585107931|gb|EWM26016.1|9.138e-111100.00hormone-sensitive lipase [Nannochloropsis gaditana... [more]
gi|553185810|ref|XP_005854311.1|6.365e-77100.00hormone-sensitive lipase, partial [Nannochloropsis... [more]
gi|219111379|ref|XP_002177441.1|3.862e-2251.69predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1210523057|dbj|GAX18108.1|6.012e-2050.56hormone-sensitive lipase [Fistulifera solaris][more]
gi|1210531392|dbj|GAX10060.1|2.109e-1949.44hormone-sensitive lipase [Fistulifera solaris][more]
gi|1072231904|gb|OEU16636.1|1.423e-1748.31Abhydrolase_3-domain-containing protein [Fragilari... [more]
gi|953503521|emb|CEG35531.1|1.944e-1744.64hormone-sensitive lipase [Plasmopara halstedii][more]
gi|301105164|ref|XP_002901666.1|8.333e-1744.64hormone-sensitive lipase, putative [Phytophthora i... [more]
gi|970635157|gb|KUF80137.1|1.251e-1644.64Esterase [Phytophthora nicotianae][more]
gi|675195479|ref|XP_008906624.1|1.251e-1644.64hypothetical protein, variant [Phytophthora parasi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4665rna4665Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications