rna4623, rna4623 (mRNA) Nannochloropsis gaditana

Overview
Namerna4623
Unique Namerna4623
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length898
Alignment locationCM002463.1:1084501..1084903 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100850g1.5853.mrna
Orig protein idgnl|cribi|Naga_100850g1.5853
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:1084501..1084903 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100850g1gene4459Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4623rna4623-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26061.1cds4611Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4623 ID=rna4623|Name=rna4623|organism=Nannochloropsis gaditana|type=mRNA|length=898bp
CCTGAGACCCTAGTAATCCGTTCGATTTCACTGAAAACCTCAAAGCCACC
CACACATATCGACGCACACTCATGCACGTAAGAATTATGTAGAATTACAT
GGGCCGTCCACGCTTCTGACGGGCCATCGCGCGCGTTTCCCTTTATTTAT
TCGCCAATCGTGGCCCATCGCCTCCTCCCTATGCGTCCTTCCCCTCCCTT
CCCATTTACCACCCCACCTACACTTTCAACCACCGTGACATCGTTTCGCC
CCCCCATCTTTGGCAAAATAATGAGATGTACCACGGAATATGGGCGAGCC
TGCATTCCTGTACATCTTCCCTGGCGTCGATTGGACAAGAAAGTGTCGAA
AACCAAGCTACCCATCTCCACCACTATGCACTCGTCGTCTTCAGCATTAT
TGGAAACGCCCTTGCATTCGACTTTCTTCTTCTGCCAATCACTCCTAAGA
AACTCACTTCTGAAACATACAGGAATCCATGAGGAGAAGAGCGTTCTTGT
TCTTTGCTTGGGTGCTCACGAGTAGCCTAGGCTGGGGTCAGACACAGCCT
GCGGAGGACGCCGGCCCGGTGTCCTCCCAGACGCTTCAGACGCAGCAGGA
GCAACAGGCGCAATTCTTCCCTCCCCGGAGACAGGAGGAGGAGGAGGAGG
AAGAGGGAGGAAGAGAGGGAAGAAAGGAGCATGGGCGTTCAAATCCTATC
CCTCAAAGCAGGGAGGGGGAAGGTGATGAGGAGGGAAGGATGGAGGAGGA
GGAATCTGAGAGGTAGGGAGGGAGGGAGGGAGGGAAGGCTGCGAACACCT
CCTTGAATGACGCGGCTCCAGTGTACTCAAGCCTGCTCTCCTCTTTTTCT
CATCCTTGAATATTGTCGGCGGCCTTTTGTTTCCCCCCTGCTCGCTTC
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protein sequence of rna4623

>rna4623-protein ID=rna4623-protein|Name=rna4623|organism=Nannochloropsis gaditana|type=polypeptide|length=71bp
MAGEWRGSGQPWHPSASFEGKDGYRRVRATIERHEKKYANRFCETCRGGK
GGGGREDVGRERGEGQRRRRI
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mRNA from alignment at CM002463.1:1084501..1084903+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4623 ID=rna4623|Name=rna4623|organism=Nannochloropsis gaditana|type=mRNA|length=403bp|location=Sequence derived from alignment at CM002463.1:1084501..1084903+ (Nannochloropsis gaditana)
ggggagacgagCGACGTTCGGCTTGTCCCTTTCCCTGGTAAGATGGGTAG
TCCCTCCCACGCAAAATTcaaatttgaatttgaattcGAAGGTGGCGTAG
GAAGATATGGCCGGAGAATGGAGGGGCAGTGGACAGCCCTGGCAcccctc
tgcttcttttgagggaaaggatggataTAGGAGGGTAAGAGCTACCATCG
AACGCCACGAAAAAAAATACGCCAACAGATTCTGTGAAACGTGtagaggt
gggaaagggggggggggaagggaggatgtaggaagggaaaggggagaagg
acagagaaggagaagaatttaaaaaaggaaaggccGGAAGAAAGTAAGAA
AGAAAGTGTTAAGGAAAGCGAATTGAATAATAATAGAAGCGTCTGCCAAG
CAA
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Coding sequence (CDS) from alignment at CM002463.1:1084501..1084903+

>rna4623 ID=rna4623|Name=rna4623|organism=Nannochloropsis gaditana|type=CDS|length=216bp|location=Sequence derived from alignment at CM002463.1:1084501..1084903+ (Nannochloropsis gaditana)
ATGGCCGGAGAATGGAGGGGCAGTGGACAGCCCTGGCAcccctctgcttc
ttttgagggaaaggatggataTAGGAGGGTAAGAGCTACCATCGAACGCC
ACGAAAAAAAATACGCCAACAGATTCTGTGAAACGTGtagaggtgggaaa
gggggggggggaagggaggatgtaggaagggaaaggggagaaggacagag
aaggagaagaatttaa
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Synonyms
Publications