EWM26121.1, cds4571 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|585108115|gb|EWM26121.1| (farnesyltransferase beta subunit [Nannochloropsis gaditana]) HSP 1 Score: 1038.48 bits (2684), Expect = 0.000e+0 Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0 Query: 1 MTSLPCASRPLSRVVGKTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL 500 MTSLPCASRPLSRVVGKTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL Sbjct: 1 MTSLPCASRPLSRVVGKTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL 500
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|585108116|gb|EWM26122.1| (farnesyltransferase beta subunit [Nannochloropsis gaditana]) HSP 1 Score: 892.878 bits (2306), Expect = 0.000e+0 Identity = 428/428 (100.00%), Postives = 428/428 (100.00%), Query Frame = 0 Query: 73 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL 500 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL Sbjct: 1 MKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVLLL 428
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|553196485|ref|XP_005856356.1| (protein farnesyltransferase subunit beta, partial [Nannochloropsis gaditana CCMP526] >gi|422292710|gb|EKU20012.1| protein farnesyltransferase subunit beta, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 374.785 bits (961), Expect = 2.342e-126 Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 0 Query: 17 KTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVD 197 KTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDG VD Sbjct: 1 KTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGYVD 181
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|953491778|emb|CEG45787.1| (farnesyltransferase beta subunit [Plasmopara halstedii]) HSP 1 Score: 345.895 bits (886), Expect = 1.447e-111 Identity = 210/478 (43.93%), Postives = 266/478 (55.65%), Query Frame = 0 Query: 18 TRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGG--PYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHL-SGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFS-LQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREG 491 TRT EQ +CE+SC+ L + +LQ N + L+RE+HVAYL +GLT L GF+ LDASRPW+ YWILH+L+LL L ++ +V T+ C N G G P Q+ H A YA+ L L +LGT +A +++DR +LY++F++RKH +G F HD GEVDVR TY VISIAS+ +LT +L AGVV+Y+LSCQTYEGGFGGE EAHGGY FC+ A L IL D + FS L W+A RQM EGG+QGRTNKLVDGCYSFWQGA L+ +E R+ FGD + P + CH + LQRYIL C Q + GGLRDKP KPRD YHTCY LSGLS AQ+G + R G P+V+GD NL+ T+P YNI DKV +A+ +F +G Sbjct: 22 TRTSSEQEDCESSCSLFFFPLPELPLDQQLELQQLNFVNTDLEPLLMREKHVAYLKRGLTRLSAGFVTLDASRPWIIYWILHALELLDALPD--------EMTERVIGTLKPCWNDDHDGGFGGGPKQLGHTATNYASCLTLALLGTLDALESVDRLSLYRFFMSRKHAATGAFMAHDGGEVDVRVTYCVISIASLYGILTDELKAGVVDYILSCQTYEGGFGGEPGNEAHGGYAFCSVATLYILEAVDQIRDFSGLLHWLANRQMPFEGGYQGRTNKLVDGCYSFWQGAIPALLA------SEVRR--------------------------------RFGD------IVPYQ-------------CH---------REQLQRYILLCGQEISGGLRDKPGKPRDHYHTCYCLSGLSVAQYG---------DGR-----GSPVVFGDASNLVARTHPAYNISYDKVIKAIEYFKSKG 411
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|1205944321|ref|XP_002458458.2| (protein farnesyltransferase subunit beta isoform X1 [Sorghum bicolor] >gi|1174561094|gb|OQU87492.1| hypothetical protein SORBI_3003G289400 [Sorghum bicolor]) HSP 1 Score: 337.806 bits (865), Expect = 1.672e-107 Identity = 203/489 (41.51%), Postives = 271/489 (55.42%), Query Frame = 0 Query: 5 PCASRP-LSRVVGKTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALH-GETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPL-VYGDIGNLLEITNPIYNIRQDKVDRALRFFYRE 490 P A+ P L R+ T T+ EQ + EA + + +++ + + L R++H+ YL +GL HLGP F LDA+RPWLCYW++H L LL +L + + CQ+ GG+ GGP Q+ H A TYAAV L+ +G+E A +I+R LYK+ L K +SG F MHD GE+DVR +YT IS+AS++N+L +LA GV +Y+ SCQTYEGG GE EAHGGY FC AALI+L+E + VDL SL GW+A RQ VE GFQGRTNKLVDGCYSFWQGA L + L + + + ++ + G C+ SY G + K+F D V I+ S +G + ALQ+YIL C+Q L+GG RDKP K RD YH+CY LSGLS Q+ + + C P V G NLLE +P+YN+ DK A FF +E Sbjct: 51 PAAADPELPRL---TVTQVEQMKVEARVGDIYRALSGAAPNTKSIM-----------LELWRDQHIEYLTRGLRHLGPAFHVLDANRPWLCYWMVHPLALL-------DEALDDNLEDDIIDFLARCQDKDGGYSGGPGQLPHLATTYAAVNTLVTIGSERALSSINRGNLYKFMLRMKDVSGAFRMHDGGEIDVRASYTAISVASLVNILDVELAKGVGDYIASCQTYEGGIAGEPYAEAHGGYTFCGLAALILLNEAEKVDLPSLIGWVAFRQ-GVECGFQGRTNKLVDGCYSFWQGAAIALTQKLLTIVDKQLKSSYSCKRPSGGDA--CSTSSY-------GCTAKNFSSAVDYAKV---------GFDFIQQSNQIGPLFHNI---ALQQYILLCSQVLEGGFRDKPGKNRDHYHSCYCLSGLSVCQYSALTD---------ADSCPLPQHVLGPYSNLLEPIHPLYNVVLDKYHTAYDFFSKE 487
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|1050646937|ref|XP_017646788.1| (PREDICTED: protein farnesyltransferase subunit beta [Gossypium arboreum]) HSP 1 Score: 334.339 bits (856), Expect = 1.539e-106 Identity = 200/485 (41.24%), Postives = 261/485 (53.81%), Query Frame = 0 Query: 18 TRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYT--EDLRDSGVSG--------KDFGD---TTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYR 489 T T+ +Q E + ++ NL SS+ + + L RE HV YL KGLT LGP F LDA+RPW+CYWILHS+ LL +L ++ CQ GG+ GGP Q+ H A TYAAV +L+ LG E+A +I+R LY + K SGGF MHD GE+DVR YT IS+AS+LN+L +L V Y+LSCQTYEGG GE EAHGGY FC A +I+++E D +DL L W+ RQ VEGGFQGRTNKLVDGCYSFWQG L++ L+ E + + E G +PQ+ T + + G++G + GD T+ +V + N+EP + ALQ+YIL C+Q L+GGLRDKP K RD YHTCY LSGLS Q ++ R V G NLLE +P+YN+ D+ A FF + Sbjct: 8 TVTQRDQILVEQQVFDIFKTFYNLPPSSQSFM-----------LELQRENHVEYLTKGLTGLGPSFCVLDANRPWICYWILHSIALL-------DEFVDPELEDNTIDFLSRCQGPNGGYAGGPGQMPHLATTYAAVNSLVTLGGEKALSSINREKLYMFLRQMKDASGGFRMHDGGEIDVRACYTAISVASLLNILDDELVQNVGNYILSCQTYEGGISGEPGSEAHGGYTFCGLATMILINEVDSLDLSGLTDWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGIFALLK-RLNSTKEVKPIPLGDGEGSGEE---SPQTTTSSDAAGEEGLNGDLSLGGSHSEIGDQHNTSSQDNVIDIDHNHSKGHANVEP---------LFNSLALQQYILLCSQELNGGLRDKPGKSRDHYHTCYCLSGLSVCQRSWLEDEDSPPLPRA--------VLGPYSNLLEPIHPLYNVVLDRYREAYEFFTK 452
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|1029008830|ref|XP_016668301.1| (PREDICTED: protein farnesyltransferase subunit beta-like [Gossypium hirsutum]) HSP 1 Score: 333.954 bits (855), Expect = 2.037e-106 Identity = 200/485 (41.24%), Postives = 262/485 (54.02%), Query Frame = 0 Query: 18 TRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQSYT--EDLRDSGVSG--------KDFGD---TTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYR 489 T T+ +Q E + ++ NL SS+ + + L RE HV YL KGLT LGP F LDA+RPW+CYWILHS+ LL +L ++ CQ GG+ GGP Q+ H A TYAAV +L+ LG ++A +I+R LY + K SGGF MHD GE+DVR YT IS+AS+LN+L +L V Y+LSCQTYEGG GE EAHGGY FC A +I+++E D +DL SL W+ RQ VEGGFQGRTNKLVDGCYSFWQG L++ L+ E + + E G +PQ+ T + + G++G + GD T+ +V + N+EP + ALQ+YIL C+Q L+GGLRDKP K RD YHTCY LSGLS Q ++ R V G NLLE +P+YN+ D+ A FF + Sbjct: 8 TVTQRDQILVEQQVFDIFKTFYNLPPSSQSFM-----------LELQRENHVEYLTKGLTGLGPSFCVLDANRPWICYWILHSIALL-------DEFVDPELENNTIDFLSRCQGPNGGYAGGPGQMPHLATTYAAVNSLVTLGGDKALSSINREKLYMFLRQMKDASGGFRMHDGGEIDVRACYTAISVASLLNILDDELVQNVGNYILSCQTYEGGISGEPGSEAHGGYTFCGLATMILINEVDRLDLSSLTDWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGIFALLKR-LNSTKEVKPIPLGDGEGSGEE---SPQTTTSSDAAGEEGLNGDLSLGGSHSEIGDQHNTSSQDNVIDIDHNHSKGHANVEP---------LFNSLALQQYILLCSQELNGGLRDKPGKSRDHYHTCYCLSGLSVCQRSWLEDEDSPPLPRA--------VLGPYSNLLEPIHPLYNVVLDRYRDAYEFFTK 452
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|1205944323|ref|XP_021312379.1| (protein farnesyltransferase subunit beta isoform X2 [Sorghum bicolor] >gi|1174561093|gb|OQU87491.1| hypothetical protein SORBI_3003G289400 [Sorghum bicolor]) HSP 1 Score: 334.724 bits (857), Expect = 2.957e-106 Identity = 203/489 (41.51%), Postives = 273/489 (55.83%), Query Frame = 0 Query: 5 PCASRP-LSRVVGKTRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALH-GETETRKVVGWRKENDGRIVLCAPQSYTEDLRDSGVSGKDFGDTTDLRSVCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPL-VYGDIGNLLEITNPIYNIRQDKVDRALRFFYRE 490 P A+ P L R+ T T+ EQ + EA + + +++ + + L R++H+ YL +GL HLGP F LDA+RPWLCYW++H L LL +L + + CQ+ GG+ GGP Q+ H A TYAAV L+ +G+E A +I+R LYK+ L K +SG F MHD GE+DVR +YT IS+AS++N+L +LA GV +Y+ SCQTYEGG GE EAHGGY FC AALI+L+E + VDL SL GW+A RQ VE GFQGRTNKLVDGCYSFWQGA L + L + + + ++ + G C+ SY G + K+F ++D V I+ S +G + ALQ+YIL C+Q L+GG RDKP K RD YH+CY LSGLS Q+ + + C P V G NLLE +P+YN+ DK A FF +E Sbjct: 51 PAAADPELPRL---TVTQVEQMKVEARVGDIYRALSGAAPNTKSIM-----------LELWRDQHIEYLTRGLRHLGPAFHVLDANRPWLCYWMVHPLALL-------DEALDDNLEDDIIDFLARCQDKDGGYSGGPGQLPHLATTYAAVNTLVTIGSERALSSINRGNLYKFMLRMKDVSGAFRMHDGGEIDVRASYTAISVASLVNILDVELAKGVGDYIASCQTYEGGIAGEPYAEAHGGYTFCGLAALILLNEAEKVDLPSLIGWVAFRQ-GVECGFQGRTNKLVDGCYSFWQGAAIALTQKLLTIVDKQLKSSYSCKRPSGGDA--CSTSSY-------GCTAKNF--SSDYAKV---------GFDFIQQSNQIGPLFHNI---ALQQYILLCSQVLEGGFRDKPGKNRDHYHSCYCLSGLSVCQYSALTD---------ADSCPLPQHVLGPYSNLLEPIHPLYNVVLDKYHTAYDFFSKE 485
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|823167845|ref|XP_012483791.1| (PREDICTED: protein farnesyltransferase subunit beta [Gossypium raimondii] >gi|763766544|gb|KJB33759.1| hypothetical protein B456_006G029800 [Gossypium raimondii]) HSP 1 Score: 331.643 bits (849), Expect = 1.468e-105 Identity = 201/486 (41.36%), Postives = 259/486 (53.29%), Query Frame = 0 Query: 18 TRTEEEQAECEASCTSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNSGGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQGATAILVEMALHGETETRKVVGWRKENDGRIVLCAPQS-----------YTEDLRDSGVSGKDFGDTTDLRS---VCPRETAMKSDMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYR 489 T T+ +Q E + ++ NL SS+ + + L RE HV YL KGLT LGP F LDA+RPW+CYWILHS+ LL +L ++ CQ GG+ GGP Q+ H A TYAAV +L+ LG ++A+ +I+R LY + K SGGF MHD GE+DVR YT IS+AS+LN+L +L V Y+LSCQTYEGG GE EAHGGY FC A +I+++E D +DL SL W+ RQ VEGGFQGRTNKLVDGCYSFWQG L++ L+ + + E G +PQ+ EDL G S + GD + S V + N+EP + ALQ+YIL C+Q L+GGLRDKP K RD YHTCY LSGLS Q ++ R V G NLLE +P+YN+ D+ A FF + Sbjct: 8 TVTQRDQILVEQQVFDIFKTFYNLPPSSQSFM-----------LELQRENHVEYLTKGLTGLGPSFCVLDANRPWICYWILHSIALL-------DEFVDPELEDNTIDFLSRCQGPNGGYAGGPGQMPHLATTYAAVNSLVTLGGDKAFSSINREKLYMFLRQMKDASGGFRMHDGGEIDVRACYTAISVASLLNILDDELVQNVGNYILSCQTYEGGISGEPGSEAHGGYTFCGLATMILINEVDRLDLSSLTDWVVFRQ-GVEGGFQGRTNKLVDGCYSFWQGGIFALLKR-LNSTKGVKPIPLGDGEGSGEE---SPQTTASSDAAGEEGLNEDLSLGG-SHSEIGDQNNTSSQVNVIDIDHNHSKGHANVEP---------LFNSLALQQYILLCSQELNGGLRDKPGKSRDHYHTCYCLSGLSVCQRSWLEDEDSPPLPRA--------VLGPYSNLLEPIHPLYNVVLDRYRGAHEFFTK 452
BLAST of EWM26121.1 vs. NCBI_GenBank
Match: gi|298711034|emb|CBJ26429.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 332.413 bits (851), Expect = 1.112e-104 Identity = 171/321 (53.27%), Postives = 218/321 (67.91%), Query Frame = 0 Query: 18 TRTEEEQAECEASC--TSLLNSWCNLDQSSRGKLQASGLFNDSGDIRLLRERHVAYLMKGLTHLGPGFICLDASRPWLCYWILHSLDLLRGLESRSHSIFRADLARKVTITMNSCQNS-GGGFGGGPYQISHCAPTYAAVLALLILGTEEAYKTIDRPALYKWFLARKHLSGGFCMHDDGEVDVRGTYTVISIASMLNMLTPQLAAGVVEYLLSCQTYEGGFGGETDQEAHGGYVFCAFAALIILSETDGVDLFSLQGWIARRQMSVEGGFQGRTNKLVDGCYSFWQ-GATAILVEMALHGETETRKVVGWRKENDGRIVL 334 T T +Q+ECE C L L+ + G+ N +G+ L+R +H YLM+GL LGPGFI LDASRPW+ YWILHSLDLL + ++ +++ T+ SCQ++ GGFGGGP Q+ HCAP YA+VL+LLILGT EAY I+R ALY+ F++ KH SGGF MHDDGEVD RGTYTVI++AS+LNMLTP+L+ GV ++ CQTYEGGFGGE EAHGGY FCAFA+L+IL + DL L+ W+ RQM EGGFQGRTNKLVDGCYSFWQ GA AIL + E+E +++ GR+++ Sbjct: 32 TATSRQQSECERMCELNFLPLRPGALEDEELAEFTDQGIVNAAGEAVLMRTKHEVYLMRGLCGLGPGFISLDASRPWMVYWILHSLDLLDHFPQQ-------EMTQRILRTVLSCQDTINGGFGGGPQQLPHCAPMYASVLSLLILGTPEAYAGIERSALYRLFMSLKHASGGFRMHDDGEVDARGTYTVIAVASLLNMLTPELSEGVADFAARCQTYEGGFGGEPWNEAHGGYTFCAFASLVILGAGERADLEGLRHWLCARQMRAEGGFQGRTNKLVDGCYSFWQGGAVAILDYVTAGRESEVS-----HRDSSGRLLV 340 HSP 2 Score: 100.523 bits (249), Expect = 7.079e-19 Identity = 57/126 (45.24%), Postives = 69/126 (54.76%), Query Frame = 0 Query: 373 DMPNIEPSCHVGGNLECLSQHALQRYILHCAQALDGGLRDKPDKPRDFYHTCYNLSGLSCAQWGQMDSLKESKNARGLNPCGHPLVYGDIGNLLEITNPIYNIRQDKVDRALRFFYREGPESHEVL 498 D+ +E G+ S+ LQ Y+L C+Q DGGLRDKP KPRDFYHTCY LSGLS AQ S P V G+ NLL TNP+YNI +DKV RA+ +F + P H L Sbjct: 424 DVEILEVGADEDGDGLVFSRKRLQEYVLMCSQQSDGGLRDKPGKPRDFYHTCYTLSGLSVAQHCLSSS---------------PTVVGNSSNLLRPTNPVYNIAEDKVLRAISYF-QALPSDHATL 533 The following BLAST results are available for this feature:
BLAST of EWM26121.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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