EWM26081.1, cds4566 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|585108075|gb|EWM26081.1| (Replication factor Mcm10 [Nannochloropsis gaditana]) HSP 1 Score: 1336.63 bits (3458), Expect = 0.000e+0 Identity = 644/644 (100.00%), Postives = 644/644 (100.00%), Query Frame = 0 Query: 1 MMMNEAHAWAVGRPGWATLVININRNIDERSKRTEPAPLSPCKGLPLTHPCAIDAAPTKMSRLIPFELSTLKKSSDEIENSIAGRPLLQVNDIGGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSATPPSSQALSLPNRVAITAPSRAITSSLPTGTTRPCGLRGHNGKPHISRPTMSVDRPSSLIQKPGKIARYQPKKRELLEKIIKRDQPHRSYTWQPTLSRTARTVNVPESRTNQTFDGHVGGTNLGTGDRSARMDVQQTAKENGVRGIAAILAADELNKDGEVLIPEPSRIFARGPDSVAYAAFRHEQEAKRQARQVGALQYRQLQQKQSEAKAVRAMNFCKRMGGTIRMIQKPENVMLKPKPRMTVPSSAGNRRQLYADGMGLNEAESLMKSKSKHSAEARGELMEHLHGVFEALGEKETRAEYFKNLSSIEVVAVSCQECNRLFEKHPRLCAKRGHILKRLTIKKRFFICGNQGCSEEVSMLGSAAPHEACSRCGEKLWRAKGKGSKAAAGGDTRAKSNGVGVLIPAVSEWNRNADLSSLYTE 644 MMMNEAHAWAVGRPGWATLVININRNIDERSKRTEPAPLSPCKGLPLTHPCAIDAAPTKMSRLIPFELSTLKKSSDEIENSIAGRPLLQVNDIGGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSATPPSSQALSLPNRVAITAPSRAITSSLPTGTTRPCGLRGHNGKPHISRPTMSVDRPSSLIQKPGKIARYQPKKRELLEKIIKRDQPHRSYTWQPTLSRTARTVNVPESRTNQTFDGHVGGTNLGTGDRSARMDVQQTAKENGVRGIAAILAADELNKDGEVLIPEPSRIFARGPDSVAYAAFRHEQEAKRQARQVGALQYRQLQQKQSEAKAVRAMNFCKRMGGTIRMIQKPENVMLKPKPRMTVPSSAGNRRQLYADGMGLNEAESLMKSKSKHSAEARGELMEHLHGVFEALGEKETRAEYFKNLSSIEVVAVSCQECNRLFEKHPRLCAKRGHILKRLTIKKRFFICGNQGCSEEVSMLGSAAPHEACSRCGEKLWRAKGKGSKAAAGGDTRAKSNGVGVLIPAVSEWNRNADLSSLYTE Sbjct: 1 MMMNEAHAWAVGRPGWATLVININRNIDERSKRTEPAPLSPCKGLPLTHPCAIDAAPTKMSRLIPFELSTLKKSSDEIENSIAGRPLLQVNDIGGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSATPPSSQALSLPNRVAITAPSRAITSSLPTGTTRPCGLRGHNGKPHISRPTMSVDRPSSLIQKPGKIARYQPKKRELLEKIIKRDQPHRSYTWQPTLSRTARTVNVPESRTNQTFDGHVGGTNLGTGDRSARMDVQQTAKENGVRGIAAILAADELNKDGEVLIPEPSRIFARGPDSVAYAAFRHEQEAKRQARQVGALQYRQLQQKQSEAKAVRAMNFCKRMGGTIRMIQKPENVMLKPKPRMTVPSSAGNRRQLYADGMGLNEAESLMKSKSKHSAEARGELMEHLHGVFEALGEKETRAEYFKNLSSIEVVAVSCQECNRLFEKHPRLCAKRGHILKRLTIKKRFFICGNQGCSEEVSMLGSAAPHEACSRCGEKLWRAKGKGSKAAAGGDTRAKSNGVGVLIPAVSEWNRNADLSSLYTE 644
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|1045381876|dbj|GAU33635.1| (hypothetical protein TSUD_310430, partial [Trifolium subterraneum]) HSP 1 Score: 83.1889 bits (204), Expect = 2.504e-13 Identity = 42/128 (32.81%), Postives = 62/128 (48.44%), Query Frame = 0 Query: 94 GGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSA 221 G S ++ VGVL EK +K S NG +Y +W I L ++ + LFGDA + P G V L + + A SL I+ P+Q++++G S Y C G C V N+ +CK H + Sbjct: 134 GDTFSGSWVTVGVLTEKGAQKTSSNGKSYCIWKIGCLDENTVSLFLFGDAYQRNCHEPAGTVFALFNSSVRKDAKGNGFSLSIYSPNQIMKMGTSVDYGVCKGKRADGMTCTLVINKRQGTYCKYHKS 261
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|308484006|ref|XP_003104204.1| (hypothetical protein CRE_01039 [Caenorhabditis remanei] >gi|308258512|gb|EFP02465.1| hypothetical protein CRE_01039 [Caenorhabditis remanei]) HSP 1 Score: 82.4185 bits (202), Expect = 1.144e-12 Identity = 56/187 (29.95%), Postives = 91/187 (48.66%), Query Frame = 0 Query: 47 LTHPCAIDAAPTKMSRLIPFELSTL--KKSSDEIENSIAGRPLLQVNDI--GGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKG---QSIKILLFGDAVLSGENVPLGAVCLLL------DPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATC-GFIDPYGFECDKVYNRHNARFCKVH 219 LT P + +A + R F++S K SS AG L +++D+ + +GV+ EK +K+S NG ++++W + +LK Q +K+L+FGDA+ + LG+V L+ D S + +LK+ K + +++IG SAHY TC G G C N + FC H Sbjct: 112 LTKP-STEAVTVGIVRFDKFQISIRNPKISSSSFGAFTAGMKLEKLSDLKPTANFKEAWCTMGVIVEKGFKKKSANGNDFLIWKLHDLKDCQTQPVKLLMFGDAIKDHWEIKLGSVIALISAQIADDSSASGAKKPVSATLKVSKSNNIVEIGQSAHYGTCKGIRQQDGQRCSNFVNSSLSEFCVFH 297
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|268572549|ref|XP_002641350.1| (Hypothetical protein CBG13203 [Caenorhabditis briggsae]) HSP 1 Score: 81.6481 bits (200), Expect = 1.494e-12 Identity = 57/187 (30.48%), Postives = 91/187 (48.66%), Query Frame = 0 Query: 47 LTHPCAIDAAPTKMSRLIPFELSTL--KKSSDEIENSIAGRPLLQVNDIGGV--LSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKG---QSIKILLFGDAVLSGENVPLGAVCLLL------DPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATC-GFIDPYGFECDKVYNRHNARFCKVH 219 LT P + +A + R F++S K SS AG L +++D+ + +GV+ EK +K+S NG ++++W + +LK Q +K+L+FGDA+ + LG+V L+ D S + + +LK+ K +I+IG SAHY TC G G C N + FC H Sbjct: 5 LTKP-STEAVTVGIVRFDKFQISIRNPKVSSTSFGAFTAGMKLEKLSDLKPTSNFKEAWCTLGVIVEKGFKKKSANGNDFLIWKLHDLKDCQTQPVKLLMFGDAIKEHWEIKLGSVIGLISAQIADDSTASGTKKNVSATLKVAKSSNIIEIGQSAHYGTCKGTRQQDGQRCSNYVNTSLSEFCVFH 190
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|1044569057|ref|XP_017420964.1| (PREDICTED: protein MCM10 homolog [Vigna angularis] >gi|965661751|dbj|BAT77460.1| hypothetical protein VIGAN_02003900 [Vigna angularis var. angularis]) HSP 1 Score: 80.4925 bits (197), Expect = 1.739e-12 Identity = 58/189 (30.69%), Postives = 85/189 (44.97%), Query Frame = 0 Query: 38 PLSPCKGL-PLTHPCAIDAAPTKMSRL-IPFELST---LKKSSDEIENSIAGRPLLQVNDIGGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSA 221 P P K L P P D+ K S L I +L T LK+ +I +++ + IG S N+A VGVL EK +K S G ++ +W I L +I + LFGDA G V L + + + SL I+ P Q++++G S Y C G C V N+ + +CK H + Sbjct: 67 PYDPPKALKPTNKPVTNDSQLEKFSGLRIKNQLLTHAELKEQFSDIR--FVRLSVIKNSLIGDSFSGNWATVGVLTEKGSQKTSSTGKSFSIWKIGCLDECTISLFLFGDAYQRNMQEQAGTVFALFNCAVRKDSAGNGFSLSIYSPRQIVKMGTSVDYGVCKGKRTDGIACTLVINKRHGTYCKYHKS 253
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|1150730874|ref|XP_020276236.1| (protein MCM10 homolog isoform X1 [Asparagus officinalis]) HSP 1 Score: 80.4925 bits (197), Expect = 2.101e-12 Identity = 49/145 (33.79%), Postives = 67/145 (46.21%), Query Frame = 0 Query: 86 PLLQVNDIGGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSATPPSSQALS 230 P+++ G S +A VGVL EK K S +G NY VW + L ++ + LFGDA N P+GAV L + R S SL ++ + +IG S Y C G C V N+ +CK HS+ SQ S Sbjct: 118 PVIRNLIAGDKFSGCWATVGVLIEKVTTKMSSSGKNYCVWKMGCLDETNVSVFLFGDAYTMNSNEPVGAVFALFN-ASLRKDASNGFSLSVYSASNISKIGTSTDYGICKGKRKDGVPCTMVINKRKGAYCKFHSSRSSLSQRYS 261
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|1150730876|ref|XP_020276237.1| (protein MCM10 homolog isoform X2 [Asparagus officinalis] >gi|1141983277|gb|ONK64500.1| uncharacterized protein A4U43_C07F26720 [Asparagus officinalis]) HSP 1 Score: 80.4925 bits (197), Expect = 2.172e-12 Identity = 49/145 (33.79%), Postives = 67/145 (46.21%), Query Frame = 0 Query: 86 PLLQVNDIGGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSATPPSSQALS 230 P+++ G S +A VGVL EK K S +G NY VW + L ++ + LFGDA N P+GAV L + R S SL ++ + +IG S Y C G C V N+ +CK HS+ SQ S Sbjct: 116 PVIRNLIAGDKFSGCWATVGVLIEKVTTKMSSSGKNYCVWKMGCLDETNVSVFLFGDAYTMNSNEPVGAVFALFN-ASLRKDASNGFSLSVYSASNISKIGTSTDYGICKGKRKDGVPCTMVINKRKGAYCKFHSSRSSLSQRYS 259
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|309359901|emb|CAP32028.2| (Protein CBG13203 [Caenorhabditis briggsae]) HSP 1 Score: 80.8777 bits (198), Expect = 2.744e-12 Identity = 57/187 (30.48%), Postives = 91/187 (48.66%), Query Frame = 0 Query: 47 LTHPCAIDAAPTKMSRLIPFELSTL--KKSSDEIENSIAGRPLLQVNDI--GGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKG---QSIKILLFGDAVLSGENVPLGAVCLLL------DPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATC-GFIDPYGFECDKVYNRHNARFCKVH 219 LT P + +A + R F++S K SS AG L +++D+ + +GV+ EK +K+S NG ++++W + +LK Q +K+L+FGDA+ + LG+V L+ D S + + +LK+ K +I+IG SAHY TC G G C N + FC H Sbjct: 83 LTKP-STEAVTVGIVRFDKFQISIRNPKVSSTSFGAFTAGMKLEKLSDLKPTSNFKEAWCTLGVIVEKGFKKKSANGNDFLIWKLHDLKDCQTQPVKLLMFGDAIKEHWEIKLGSVIGLISAQIADDSTASGTKKNVSATLKVAKSSNIIEIGQSAHYGTCKGTRQQDGQRCSNYVNTSLSEFCVFH 268
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|901816012|gb|KMZ70321.1| (hypothetical protein ZOSMA_1G03020 [Zostera marina]) HSP 1 Score: 79.7221 bits (195), Expect = 2.849e-12 Identity = 57/200 (28.50%), Postives = 83/200 (41.50%), Query Frame = 0 Query: 46 PLTHPCAIDAAPTKMSRLIPFELSTLKKSSDEIENSIAG----RPLLQVNDIGG----------------VLSPN----YALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVHSA 221 P+ C D P + +K+SSD + +G PLL V DI +L N +A VGVL EK K S NG N+ VW + L + + LFGDA + P+G + L++ + SL I Q++++G+SA Y C G C V N+ +CK HS+ Sbjct: 62 PVVDLCTADKNPKS---------NKIKESSDIVMEKFSGLRIRNPLLSVKDINNHFADVRFVRLPAIRNLMLGENTPGCWATVGVLTEKGQTKVSSNGKNFSVWKLGTLDELIVSVFLFGDAHSKNSHEPVGTIFALINSSVRKDTSGKGFSLSIFSNGQILKMGISADYIVCKGKRKDGIACTMVINKCQGIYCKFHSS 252
BLAST of EWM26081.1 vs. NCBI_GenBank
Match: gi|1108981987|ref|XP_019107498.1| (PREDICTED: protein MCM10 homolog isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 79.337 bits (194), Expect = 3.223e-12 Identity = 47/151 (31.13%), Postives = 67/151 (44.37%), Query Frame = 0 Query: 74 SSDEIENSIAGRPLLQVNDI-----GGVLSPNYALVGVLGEKEPRKQSKNGCNYIVWFIDNLKGQSIKILLFGDAVLSGENVPLGAVCLLLDPVGSRPAPSAAMSLKIHKPHQVIQIGLSAHYATCGFIDPYGFECDKVYNRHNARFCKVH 219 SS E+ N + ++++ I G LS +A VGVL EK +K S G Y +W + L GQ I I LFGDA P V + + A + L + K +Q+++IG S Y C G C V N+ +C H Sbjct: 59 SSAELSNQFSDIRFVRLSSIKNLIRGETLSGCWATVGVLTEKGTKKTSTTGKGYCIWKVGCLDGQLITIFLFGDAYKQYSKEPASTVFAFFNANVRKEASGSGFQLSVFKANQILKIGTSVDYGVCKGRRKDGLPCSIVVNKRLGIYCSFH 209 The following BLAST results are available for this feature:
BLAST of EWM26081.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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