EWM26120.1, cds4546 (CDS) Nannochloropsis gaditana

Overview
NameEWM26120.1
Unique Namecds4546
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:912043..913137 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26120.1
ProductNucleic acid-binding, OB-fold-like protein
Orig transcript idgnl|cribi|Naga_100014g36.9297.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:912043..913137 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029028Alpha/beta_knot_MTases
IPR012340NA-bd_OB-fold
IPR003750Put_MeTrfase
IPR029026tRNA_m1G_MTases_N
Homology
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|585108114|gb|EWM26120.1| (Nucleic acid-binding, OB-fold-like protein [Nannochloropsis gaditana])

HSP 1 Score: 749.199 bits (1933), Expect = 0.000e+0
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0
Query:    1 MQITRGGKIFTTQDGRKGQHKKVTNIRKRKHPATNLAAAVEDVAPQQHVSLTPRHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSGASPSYNWGDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVKAGKND 364
            MQITRGGKIFTTQDGRKGQHKKVTNIRKRKHPATNLAAAVEDVAPQQHVSLTPRHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSGASPSYNWGDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVKAGKND
Sbjct:    1 MQITRGGKIFTTQDGRKGQHKKVTNIRKRKHPATNLAAAVEDVAPQQHVSLTPRHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSGASPSYNWGDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVKAGKND 364          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|1173942695|gb|OQR91653.1| (hypothetical protein ACHHYP_04498 [Achlya hypogyna])

HSP 1 Score: 368.622 bits (945), Expect = 7.615e-123
Identity = 172/314 (54.78%), Postives = 223/314 (71.02%), Query Frame = 0
Query:   54 RHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSGASP-----SYNWGDPN---LFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVK 359
            R +TVSIA+ GSIV NAQ+ EL+TYL G+IARAAAIFQVDE++VF D  G +      +  + +PN   +F GR+LQY+ETPQYLRKA+FP HSDL++AG+LNPLD PHH R  E   YREGV VD P+    GS VNVGL+ Y  +D+ L+PGVRVTVKL   D      +K       L G  VSPA PRE  G YWGYT R A +L EV+ +SP+K GYD+ +GTSERG   ++D DF LP+F+H+L+VFGGV+G+E C      + ++  + HTLFD+W+NTCP QGSRTIR+EEA+ I+M+ LRP +++
Sbjct:   85 RMFTVSIAIPGSIVDNAQTKELKTYLAGQIARAAAIFQVDEVIVFDDQLGKAANDKDVTKKYNNPNDCHVFLGRILQYLETPQYLRKALFPVHSDLKYAGLLNPLDCPHHMRGDEWTAYREGVVVDAPSKEKRGSYVNVGLKKYAVIDKHLQPGVRVTVKL---DETSKDKKK-------LVGTVVSPAEPREQLGTYWGYTMRFATSLKEVWTESPYKKGYDLKIGTSERGTSCVDDTDFALPSFEHVLIVFGGVSGIEECTSADESIAINGDQAHTLFDMWVNTCPQQGSRTIRSEEAILISMSALRPHLMR 388          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|698797958|ref|XP_009832008.1| (hypothetical protein H257_07970 [Aphanomyces astaci] >gi|574112935|gb|ETV78426.1| hypothetical protein H257_07970 [Aphanomyces astaci])

HSP 1 Score: 363.614 bits (932), Expect = 8.915e-121
Identity = 172/314 (54.78%), Postives = 225/314 (71.66%), Query Frame = 0
Query:   54 RHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSG-------ASPSYNW-GDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVK 359
            R YTVSIA+ GSI+ NAQ+ EL+TYL G+IARA AIFQVDE+VVF D  G       A+  YN   D N+F GR+LQY+ETPQYLRKA+FP H+DL++AG+LNPLD PHH R      YREGV VD P     GS VNVGL+ +  +D+ L+PGVRVTV+L  S           +   +L+G+ VSPA PRE  GLYWGYT R A ++++V+ + P+K GYD+ VGTSERG  S++D+ F LP+F+H+L+VFGGV+G+E C      +G+S  + HTLFD+W+NTCP QGSRTIR+EEA+ I+M+ LRP +V+
Sbjct:   96 RFYTVSIAIPGSIIDNAQTKELKTYLAGQIARACAIFQVDEVVVFDDQLGKNANNQDATKKYNNPNDCNVFLGRILQYLETPQYLRKALFPVHNDLKYAGLLNPLDCPHHMRGDVWSDYREGVVVDQPLKEKQGSHVNVGLQKFAVIDKHLQPGVRVTVQLDESS----------KDKKKLAGIVVSPAEPREQKGLYWGYTMRFATSISKVWQECPYKNGYDLKVGTSERGTVSVDDSTFQLPSFQHVLIVFGGVSGIEECTNADETIGVSGDQAHTLFDMWVNTCPQQGSRTIRSEEAILISMSALRPHLVR 399          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|669160350|ref|XP_008615737.1| (hypothetical protein SDRG_11472 [Saprolegnia diclina VS20] >gi|530732471|gb|EQC30713.1| hypothetical protein SDRG_11472 [Saprolegnia diclina VS20])

HSP 1 Score: 362.073 bits (928), Expect = 2.642e-120
Identity = 179/344 (52.03%), Postives = 231/344 (67.15%), Query Frame = 0
Query:   27 RKRKHPATNLAAAVEDVAPQQHVS----LTPRHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSGASP-----SYNWGDPN---LFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIV 358
            RK+K      A AVE     + +        R +TVSIAV GSIV NAQ+ EL+TYL G+IARAAAIFQVDE++VF D  G +      +  + +PN   +F GR+LQY+ETPQYLRKA+FP HSDL++AG+LNPLD PHH R  E   YREGV VD P     GS VNVGL+ +  +D+ L+PGVRVTVKL   D      +K       L+G  VSPA PRE  G YWGYT RLA +L EV+ +SP+K GYD+ +GTSERG   ++D DF LP F+H+L+VFGGV+G+E C      + ++  + HTLFD+W+NTCP QGSRTIR+EEA+ I+M+ LR  ++
Sbjct:   54 RKQKRVDKQAAKAVEREQEAERLKEERRTLGRRFTVSIAVPGSIVDNAQTKELKTYLAGQIARAAAIFQVDEVIVFDDQLGKAANDKDVTKKYNNPNDCHVFLGRILQYLETPQYLRKALFPVHSDLKYAGLLNPLDCPHHMRGDEWTAYREGVVVDVPGKEKRGSHVNVGLKKFAVIDKHLQPGVRVTVKL---DETSKDKKK-------LAGTVVSPAEPREQLGEYWGYTMRLATSLKEVWTESPYKKGYDLKIGTSERGTSCVDDKDFKLPPFEHVLIVFGGVSGIEECTSADESIAINGDQAHTLFDMWVNTCPQQGSRTIRSEEAILISMSALRSHLM 387          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|1173957089|gb|OQS03703.1| (hypothetical protein THRCLA_21098 [Thraustotheca clavata])

HSP 1 Score: 361.303 bits (926), Expect = 4.910e-120
Identity = 170/313 (54.31%), Postives = 220/313 (70.29%), Query Frame = 0
Query:   54 RHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSGASP-----SYNWGDPN---LFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIV 358
            R +TVSIAV GSIV NAQ+ EL+TYL G+IARAAAIFQVDE++VF D  G +      +  + +PN   +F GR+LQY+ETPQYLRKA+FP HSDL++AG+LNPLD PHH R  E   YREGV V+       GS VNVGL+ Y  +D+ ++PGVRVTVKL  S           +   +L+G  VSPA PRE  G YWGYT R A +L EV+ +SP+K GYD+ +GTSERG   ++D DF LP F+H+L+VFGGVAG+E C      + ++  + HTLFD+W+NTCP QGSRTIR+EEA+ I+M+ LRP ++
Sbjct:   82 RLFTVSIAVPGSIVDNAQTKELKTYLAGQIARAAAIFQVDEVIVFDDQLGKAANDKDVTKKYNNPNDCHVFLGRILQYLETPQYLRKALFPVHSDLKYAGLLNPLDCPHHMRGDEWTTYREGVVVEQATKDKKGSYVNVGLKKYAVIDKYIQPGVRVTVKLDESS----------KDKKKLAGTVVSPAEPREQLGTYWGYTMRFATSLKEVWTESPYKKGYDLKIGTSERGTSCVDDRDFKLPPFEHVLIVFGGVAGIEECTSADESIAVNGDQAHTLFDMWVNTCPQQGSRTIRSEEAILISMSALRPHLM 384          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|953492068|emb|CEG45318.1| (Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 356.295 bits (913), Expect = 8.389e-118
Identity = 170/314 (54.14%), Postives = 222/314 (70.70%), Query Frame = 0
Query:   54 RHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSGAS-----PSYNWGDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVKAGK 362
            R YT+S+A+ GSI+ NAQ+ EL+TYL G++ARAA IFQVDEI+VF D  G S     P     D ++F  R+LQY+ETPQYLR+A+FP HSDL  AG+LNPLD PHH RAHE  VYREGV  D P     GS V VGL+  V +D+R++PG+RVTVK+          +  ++   ++ G  VS A PRE  G+YWGYTTR A +L+ V+   PF GGYD+ VGTSERG+ S++D DF LP F+H LVVFGGVAG+E CV+    L +S  +++TLFD+W+NTCPDQGSRTIR+EEA+ I++A LR  +  +G+
Sbjct:  102 RAYTLSMAIPGSILDNAQTKELKTYLAGQVARAAVIFQVDEIIVFDDQLGNSVSTGAPKKRAQDCHVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAHEWSVYREGVVTDRPLKEKEGSHVYVGLQREVVVDKRIQPGIRVTVKI---------DEASKEFKKKMVGTLVSSAEPREQLGIYWGYTTRFASSLSNVWTNCPFPGGYDLKVGTSERGNVSVDDPDFTLPTFRHALVVFGGVAGIEECVDADETLPVSGEDSNTLFDMWVNTCPDQGSRTIRSEEALLISLAALRSHVKHSGR 406          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|673025266|ref|XP_008866594.1| (hypothetical protein H310_04162 [Aphanomyces invadans] >gi|574478160|gb|ETW05156.1| hypothetical protein H310_04162 [Aphanomyces invadans])

HSP 1 Score: 355.14 bits (910), Expect = 1.983e-117
Identity = 170/314 (54.14%), Postives = 222/314 (70.70%), Query Frame = 0
Query:   54 RHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSG-------ASPSYNW-GDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVK 359
            R +TVSIA+ GSI+ NAQ+ EL+TYL G+IARA AIFQVDEIVVF D  G       A+  YN   D ++F GR+LQY+ETPQYLRKA+FP H+DL++AG+LNPLD PHH R      +REGV VD P     GS VNVGL+ +  +D+ L+PGVRVTV+L  S           +   +L+G  VSPA PRE  GLYWGYT R A ++++V+ +SPFK GYD+ +GTSERG  S++DA F LP+F+H L+VFGGV+G+E C      + ++    HTLFD+W+NTCP QGSRTIR+EEA+ I+M+ LRP +V+
Sbjct:   94 RFFTVSIAIPGSIIDNAQTKELKTYLAGQIARACAIFQVDEIVVFDDQLGKNANNQDATKKYNNPNDCHVFLGRILQYLETPQYLRKALFPVHNDLKYAGLLNPLDCPHHMRGDVWSEFREGVVVDQPLKEKHGSHVNVGLQKFAVIDKHLQPGVRVTVQLDES----------SKDKKKLAGTVVSPAEPREQKGLYWGYTMRFATSISKVWQESPFKNGYDLKIGTSERGTVSVDDASFSLPSFEHALIVFGGVSGIEECANADETIEVTGDRAHTLFDMWVNTCPQQGSRTIRSEEAILISMSALRPHLVR 397          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|970663007|gb|KUG00290.1| (hypothetical protein AM587_10002865 [Phytophthora nicotianae])

HSP 1 Score: 352.443 bits (903), Expect = 2.944e-116
Identity = 168/315 (53.33%), Postives = 225/315 (71.43%), Query Frame = 0
Query:   54 RHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSG-----ASPSYNWGDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVKAGKN 363
            R YT+S+A+ GSI+ NAQ+ EL+TYL G++ARAA IFQVDEIVVF D  G      +P     D ++F  R+LQY+ETPQYLR+A+FP HSDL  AG+LNPLD PHH RA E  VYREGV  D P     GS V VGL+  V +D+R++PG+RVTVK+          +  +    ++ G  VS A PRE  G+YWGYTTR A +L+ V+   PF GGYD+ VGTSERG+ S++DADF LP F+H L+VFGGVAG+E CV+   ++ +S  +++TLFD+W+NTCP+QGSRTIR+EEA+ I++A LRP + ++G++
Sbjct:  102 RGYTLSMAIPGSILDNAQTKELKTYLAGQVARAAVIFQVDEIVVFDDQLGNNVSTGAPKKRAHDCHVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAQEWSVYREGVVTDRPLKEKEGSHVYVGLQREVVVDKRIQPGIRVTVKI---------DEASKDFKKKMVGKLVSSAEPREQLGVYWGYTTRFASSLSNVWTDCPFPGGYDLKVGTSERGNVSVDDADFSLPKFRHALIVFGGVAGIEECVDADEKVPVSGEDSNTLFDMWVNTCPEQGSRTIRSEEALLISLAALRPHVKRSGRS 407          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|567956812|gb|ETK82429.1| (hypothetical protein L915_12181 [Phytophthora parasitica] >gi|567985478|gb|ETL35818.1| hypothetical protein L916_12109 [Phytophthora parasitica] >gi|570947250|gb|ETP12507.1| hypothetical protein F441_12122 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 352.443 bits (903), Expect = 3.008e-116
Identity = 168/315 (53.33%), Postives = 225/315 (71.43%), Query Frame = 0
Query:   54 RHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSG-----ASPSYNWGDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVKAGKN 363
            R YT+S+A+ GSI+ NAQ+ EL+TYL G++ARAA IFQVDEIVVF D  G      +P     D ++F  R+LQY+ETPQYLR+A+FP HSDL  AG+LNPLD PHH RA E  VYREGV  D P     GS V VGL+  V +D+R++PG+RVTVK+          +  +    ++ G  VS A PRE  G+YWGYTTR A +L+ V+   PF GGYD+ VGTSERG+ S++DADF LP F+H L+VFGGVAG+E CV+   ++ +S  +++TLFD+W+NTCP+QGSRTIR+EEA+ I++A LRP + ++G++
Sbjct:  102 RGYTLSMAIPGSILDNAQTKELKTYLAGQVARAAVIFQVDEIVVFDDQLGNNVSTGAPKKRAHDCHVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAQEWSVYREGVVTDRPLKEKEGSHVYVGLQREVVVDKRIQPGIRVTVKI---------DEASKDFKKKMVGKLVSSAEPREQLGVYWGYTTRFASSLSNVWTDCPFPGGYDLKVGTSERGNVSVDDADFSLPKFRHALIVFGGVAGIEECVDADEKVPVSGEDSNTLFDMWVNTCPEQGSRTIRSEEALLISLAALRPHVKRSGRS 407          
BLAST of EWM26120.1 vs. NCBI_GenBank
Match: gi|570979278|gb|ETP40256.1| (hypothetical protein F442_12383 [Phytophthora parasitica P10297])

HSP 1 Score: 352.058 bits (902), Expect = 3.781e-116
Identity = 168/315 (53.33%), Postives = 225/315 (71.43%), Query Frame = 0
Query:   54 RHYTVSIAVAGSIVLNAQSPELRTYLVGEIARAAAIFQVDEIVVFGDSSG-----ASPSYNWGDPNLFFGRLLQYIETPQYLRKAIFPHHSDLRFAGILNPLDAPHHPRAHENLVYREGVTVDTPANSAGGSLVNVGLRNYVHLDRRLKPGVRVTVKLISSDPVGGSGQKHQQRPHELSGVAVSPAAPRETAGLYWGYTTRLAKNLTEVFAQSPFKGGYDVTVGTSERGHQSIEDADFVLPAFKHLLVVFGGVAGLEACVEGTAELGLSASETHTLFDVWLNTCPDQGSRTIRTEEAVPITMARLRPFIVKAGKN 363
            R YT+S+A+ GSI+ NAQ+ EL+TYL G++ARAA IFQVDEIVVF D  G      +P     D ++F  R+LQY+ETPQYLR+A+FP HSDL  AG+LNPLD PHH RA E  VYREGV  D P     GS V VGL+  V +D+R++PG+RVTVK+          +  +    ++ G  VS A PRE  G+YWGYTTR A +L+ V+   PF GGYD+ VGTSERG+ S++DADF LP F+H L+VFGGVAG+E CV+   ++ +S  +++TLFD+W+NTCP+QGSRTIR+EEA+ I++A LRP + ++G++
Sbjct:  102 RGYTLSMAIPGSILDNAQTKELKTYLAGQVARAAVIFQVDEIVVFDDQLGNNVSTGAPKKRAHDCHVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAQEWSVYREGVVTDRPLKEKEGSHVYVGLQREVVVDKRIQPGIRVTVKI---------DEASKDFKKKMIGKLVSSAEPREQLGVYWGYTTRFASSLSNVWTDCPFPGGYDLKVGTSERGNVSVDDADFSLPKFRHALIVFGGVAGIEECVDADEKVPVSGEDSNTLFDMWVNTCPEQGSRTIRSEEALLISLAALRPHVKRSGRS 407          
The following BLAST results are available for this feature:
BLAST of EWM26120.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108114|gb|EWM26120.1|0.000e+0100.00Nucleic acid-binding, OB-fold-like protein [Nannoc... [more]
gi|1173942695|gb|OQR91653.1|7.615e-12354.78hypothetical protein ACHHYP_04498 [Achlya hypogyna... [more]
gi|698797958|ref|XP_009832008.1|8.915e-12154.78hypothetical protein H257_07970 [Aphanomyces astac... [more]
gi|669160350|ref|XP_008615737.1|2.642e-12052.03hypothetical protein SDRG_11472 [Saprolegnia dicli... [more]
gi|1173957089|gb|OQS03703.1|4.910e-12054.31hypothetical protein THRCLA_21098 [Thraustotheca c... [more]
gi|953492068|emb|CEG45318.1|8.389e-11854.14Uncharacterized conserved protein [Plasmopara hals... [more]
gi|673025266|ref|XP_008866594.1|1.983e-11754.14hypothetical protein H310_04162 [Aphanomyces invad... [more]
gi|970663007|gb|KUG00290.1|2.944e-11653.33hypothetical protein AM587_10002865 [Phytophthora ... [more]
gi|567956812|gb|ETK82429.1|3.008e-11653.33hypothetical protein L915_12181 [Phytophthora para... [more]
gi|570979278|gb|ETP40256.1|3.781e-11653.33hypothetical protein F442_12383 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4558rna4558Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications