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Properties
| Property Name | Value |
|---|
| Product | flagellar outer dynein arm-docking complex protein 1 |
| Orig transcript id | gnl|cribi|Naga_100014g35.9264.mrna |
| Orig protein id | gnl|cribi|Naga_100014g35.9264 |
| Gene | ODA1 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:909051..911548 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4557 ID=rna4557|Name=rna4557|organism=Nannochloropsis gaditana|type=mRNA|length=2454bp
AGAGGGAATTCTTCTTGAATATCTATCCCTACTCAGACAGAAAGTGTGCT
CGGGCATCAATTGTGCCTTCTAGAGAAGAAAGTAAGAAGTTACCTTGAGA
GGAATGTCCTCGACGGCAACCCCTCGTGCTCTCACACGAGACAAACCGGG
GACCTTAAGGAGTAGCCTTTCGGCTAAATTGAACAATAAAGCCAGAGCTA
TAACACCCACACGCGGAAAACAATCGATAAGAGAAAATACGCCGCTGAAA
CGAGTCCAAAAAGAGGTAGGGTGTGGTGGTGAAGGTAATTCGATTATTTC
GTTCTTTCAATTCGACACGCGTTTCTCAATTTCTTATTTAAAGCGTCAGG
ACCTGGATGCCATCAATCATGCAAATGCATTGATCCGCCTTGATGCAATT
CAAGGGGCTCGTGAGGCCAAGATCAATGTGAAGACGGGTGTGTCAAAAGA
GGTGGCGCGCCTTCAAGATCAGGCAGCAATGTACTTCAGGCGTATTCAGG
TGGAAAGGCGCAAGGTGGCAGAGCTAGAAGAGCAAGTAAATACTGCACAA
ATGAAAGTCCTCGAGCAAAAACAGAAGATGGGAGGTGTAAATGCGTCAAA
AGAAAATGACGCAATACTCGCAAAGCAAACTCAACTCCTCGAAAATCGAC
TAGATAAAACGTTGGTGAAATTTAATCAGGCTCTAGGAGAGGTGAGTGTA
TAAAAAGTGCAACCTTAAATGTTCTTAATGTGCAATTTTAAATGCGCGAA
AATCTGGAGATGACCAGGGCAACGACCTGTAGAATTGCACAGGAAACAAC
ATTCGGACGAAGTGCAGAGCATACTGTGACGCCTTCTCCAAAATGAACAG
GTGTACAACTATCCTCATTCCTTCTGTATCTCTCATGTACACACATGTGC
ATGCGCACGCTTGCGTGTTGACTTATCAATGACACATTAACAGAATAAGA
GGCTTAGAGAACGAATCGACCGCCTACGTATGGATCGAGTTGTCTACGAC
AATGTTTACAAGCGACTAGAACGATGCCTTCACGAAAAGAAGAAAGAGAT
GGCGCAAGTTATAGAGGACGCAAAACGGGTCTGCGTCGCGAGGGATAAGG
CAAAGAGCGAAATTAATAATCTTAAGCAGCAGGCTGAAAAAGAAAAAGCC
CAATTTCAAAGAGAGTGGGCAGAGTTGGGCCGTTTGATTGAAGAGGATCG
GCAGGCTAGGGATTCCATACAGAAAACGATGGAAGCCGAGCGACGGAGCC
AACGTCTCTCGGAGCAGTCGCATCGTTCCAAGAGCCCAGCAGGAAGAACT
GGCCTGGTGACAAGTAAGCCAAGAGATAACTCCTCTGGTAATTCACCAAT
GGATGTGAACAAGCAATCAAAAGGGGATGAGAGTGGCATTCCTGGTGAAG
TCGTCAGTCCCGATAGGAACGCTCTCAATGAGAAGTCAAGCAGCGCCACT
GCATCCGCAGTCCCACTATCATCATCCGGTGCAACGACGGCTCCTTTACT
GTCCCTCACACCCGAGAAAATACGACTATATGAAGAGGTTTTCGCCCAAG
TACAAGAAGCAACGGGACTCACTGATATTGAAGAGATGGTCACGAAATTT
CTTGAAGCTGAAGAGAAGAATTTTTCGCTGTTTAACTATGTCAATGACCT
AAACACGGAAATCGATGAACTGGAATCCTTCATTGGAGAGAATAAAAATG
AAATAGAGAAAAATAAAGACCAGGGTAGCAACGCTGACTCCAGGCAGAAA
CGCTTGGCCCGGGCGGGTGAAGAACGCCAGCAGCAAATCAAAGCGAAAGC
GGATGAGTACGAGCTCAAGTACATTGCCGCCACCAAAGCCATTAATCAGC
TAAAAACGAGCATACACTCAATCTTTTCACGGTTAGGTTGTGCGACTACA
ACCCCCATGGAGGAGATTCTGGGAAACCAGGGCGTAACAGAGTCAAATAT
GATGCAATATTTGGGCTTCATCGAACAGCGTACTATCGAAATCCTTCAAC
TCTATCGTGCGAGACAGAGCAGAGATGCTACTAGCTCATTAAATGAAGCC
GCTCACTCATCATCAACACCATTTCGCATTACCGTCCAGCCTCCCTCCCT
ATCGGAAATAGAGCGTGACGAGGAGGCTGCGACGCAGCCGCATGCCCAAG
CCACCAAATTCAGAGGTTATACTGTGAGTAAGACTATCAAAAGCATAAAT
CATCCATCATTTGAAGAGGATGATGCAGAAGATCGGCCCTTAACGAGGCA
AGAGTTGCAGGAAAAAGCCGTATCAAGTGCTGTGGGTAAATCGAAGCAGC
AGAAAAGCAGTATGAGGCCTTGTGATGAACGACAAGCCATTTAAAGCCAA
GAAAAGATGTCCTAAAATTTACACATTTCTATGAAAGGTGTTTCTCCCCA
TCGTTTATTTAAGTCACGACGAATTGGAATGTGCGTCTTGGCATGTGTAT
CAGG back to topprotein sequence of rna4557 >rna4557-protein ID=rna4557-protein|Name=rna4557|organism=Nannochloropsis gaditana|type=polypeptide|length=513bp
MKVLEQKQKMGGVNASKENDAILAKQTQLLENRLDKTLVKFNQALGENKR
LRERIDRLRMDRVVYDNVYKRLERCLHEKKKEMAQVIEDAKRVCVARDKA
KSEINNLKQQAEKEKAQFQREWAELGRLIEEDRQARDSIQKTMEAERRSQ
RLSEQSHRSKSPAGRTGLVTSKPRDNSSGNSPMDVNKQSKGDESGIPGEV
VSPDRNALNEKSSSATASAVPLSSSGATTAPLLSLTPEKIRLYEEVFAQV
QEATGLTDIEEMVTKFLEAEEKNFSLFNYVNDLNTEIDELESFIGENKNE
IEKNKDQGSNADSRQKRLARAGEERQQQIKAKADEYELKYIAATKAINQL
KTSIHSIFSRLGCATTTPMEEILGNQGVTESNMMQYLGFIEQRTIEILQL
YRARQSRDATSSLNEAAHSSSTPFRITVQPPSLSEIERDEEAATQPHAQA
TKFRGYTVSKTIKSINHPSFEEDDAEDRPLTRQELQEKAVSSAVGKSKQQ
KSSMRPCDERQAI back to topmRNA from alignment at CM002463.1:909051..911548+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4557 ID=rna4557|Name=rna4557|organism=Nannochloropsis gaditana|type=mRNA|length=2498bp|location=Sequence derived from alignment at CM002463.1:909051..911548+ (Nannochloropsis gaditana)
CTACTCAGACAGAAAGTGTGCTCGGGCATCAATTGTGCCTTCTAGAGAAG
AAAGTAAGAAGTTACCTTGAGAGGAATGTCCTCGACGGCAACCCCTCGTG
CTCTCACACGAGACAAACCGGGGACCTTAAGGAGTAGCCTTTCGGCTAAA
TTGAACAATAAAGCCAGAGCTATAACACCCACACGCGGAAAACAATCGAT
AAGAGAAAATACGCCGCTGAAACGAGTCCAAAAAGAGGTAGGGTGTGGTG
GTGAAGGTAATTCGATTATTTCGTTCTTTCAATTCGACACGCGTTTCTCA
ATTTCTTATTTAAAGCGTCAGGACCTGGATGCCATCAATCATGCAAATGC
ATTGATCCGCCTTGATGCAATTCAAGGGGCTCGTGAGGCCAAGATCAATG
TGAAGACGGGTGTGTCAAAAGAGGTGGCGCGCCTTCAAGATCAGGCAGCA
ATGTACTTCAGGCGTATTCAGGTGGAAAGGGTACGAAGCGCAATAAAACC
ATCACAATATCTAATCAGAAACTCACTCGCTAGCTTTATATTTGCACCAT
AGCGCAAGGTGGCAGAGCTAGAAGAGCAAGTAAATACTGCACAAATGAAA
GTCCTCGAGCAAAAACAGAAGATGGGAGGTGTAAATGCGTCAAAAGAAAA
TGACGCAATACTCGCAAAGCAAACTCAACTCCTCGAAAATCGACTAGATA
AAACGTTGGTGAAATTTAATCAGGCTCTAGGAGAGGTGAGTGTATAAAAA
GTGCAACCTTAAATGTTCTTAATGTGCAATTTTAAATGCGCGAAAATCTG
GAGATGACCAGGGCAACGACCTGTAGAATTGCACAGGAAACAACATTCGG
ACGAAGTGCAGAGCATACTGTGACGCCTTCTCCAAAATGAACAGGTGTAC
AACTATCCTCATTCCTTCTGTATCTCTCATGTACACACATGTGCATGCGC
ACGCTTGCGTGTTGACTTATCAATGACACATTAACAGAATAAGAGGCTTA
GAGAACGAATCGACCGCCTACGTATGGATCGAGTTGTCTACGACAATGTT
TACAAGCGACTAGAACGATGCCTTcacgaaaagaagaaagagatggcGCA
AGTTATAGAGGACGCAAAACGGGTCTGCGTCGCGAGGGATAAGGCAAAGA
GCGAAATTAATAATCTTAAGCAGCAGgctgaaaaagaaaaagcccAATTT
CAAAGAGAGTGGGCAGAGTTGGGCCGTTTGATTGAAGAGGATCGGCAGGC
TAGGGATTCCATACAGAAAACGATGGAAGCCGAGCGACGGAGCCAACGTC
TCTCGGAGCAGTCGCATCGTTCCAAGAGCCCAGCAGGAAGAACTGGCCTG
GTGACAAGTAAGCCAAGAGATAACTCCTCTGGTAATTCACCAATGGATGT
GAACAAGCAATCAAAAGGGGATGAGAGTGGCATTCCTGGTGAAGTCGTCA
GTCCCGATAGGAACGCTCTCAATGAGAAGTCAAGCAGCGCCACTGCATCC
GCAGTCCCACTATCATCATCCGGTGCAACGACGGCTCCTTTACTGTCCCT
CACACCCGAGAAAATACGACTATATGAAGAGGTTTTCGCCCAAGTACAAG
AAGCAACGGGACTCACTGATATTGAAGAGATGGTCACGAAATTTCTTGAA
GCTGAAGAGAAGAATTTTTCGCTGTTTAACTATGTCAATGACCTAAACAC
GGAAATCGATGAACTGGAATCCTTCATTGGAGAGAATAAAAATGAAATAG
AGAAAAATAAAGACCAGGGTAGCAACGCTGACTCCAGGCAGAAACGCTTG
GCCCGGGCGGGTGAAGAACGCCAGCAGCAAATCAAAGCGAAAGCGGATGA
GTACGAGCTCAAGTACATTGCCGCCACCAAAGCCATTAATCAGCTAAAAA
CGAGCATACACTCAATCTTTTCACGGTTAGGTTGTGCGACTACAACCCCC
ATGGAGGAGATTCTGGGAAACCAGGGCGTAACAGAGTCAAATATGATGCA
ATATTTGGGCTTCATCGAACAGCGTACTATCGAAATCCTTCAACTCTATC
GTGCGAGACAGAGCAGAGATGCTACTAGCTCATTAAATGAAGCCGCTCAC
TCATCATCAACACCATTTCGCATTACCgtccagcctccctccctatcggA
AATAGAGCGTGACGAGGAGGCTGCGACGCAGCCGCATGCCCAAGCCACCA
AATTCAGAGGTTATACTGTGAGTAAGACTATCAAAAGCATAAATCATCCA
TCATTTGAAGAGGATGATGCAGAAGATCGGCCCTTAACGAGGCAAGAGTT
GCAGGAAAAAGCCGTATCAAGTGCTGTGGGTAAATCGAAGCAGCAGAAAA
GCAGTATGAGGCCTTGTGATGAACGACAAGCCATTTAAAGCCAAGAAAAG
ATGTCCTAAAATTTACACATTTCTATGAAAGGTGTTTCTCCCCATCGTTT
ATTTAAGTCACGACGAATTGGAATGTGCGTCTTGGCATGTGTATCAGG back to topCoding sequence (CDS) from alignment at CM002463.1:909051..911548+ >rna4557 ID=rna4557|Name=rna4557|organism=Nannochloropsis gaditana|type=CDS|length=3084bp|location=Sequence derived from alignment at CM002463.1:909051..911548+ (Nannochloropsis gaditana)
ATGAAAGTCCTCGAGCAAAAACAGAAGATGGGAGGTGTAAATGCGTCAAA
AGAAAATGACGCAATACTCGCAAAGCAAACTCAACTCCTCGAAAATCGAC
TAGATAAAACGTTGGTGAAATTTAATCAGGCTCTAGGAGAGAATAAGAGG
CTTAGAGAACGAATCGACCGCCTACGTATGGATCGAGTTGTCTACGACAA
TGTTTACAAGCGACTAGAACGATGCCTTcacgaaaagaagaaagagatgg
cGCAAGTTATAGAGGACGCAAAACGGGTCTGCGTCGCGAGGGATAAGGCA
AAGAGCGAAATTAATAATCTTAAGCAGCAGgctgaaaaagaaaaagcccA
ATTTCAAAGAGAGTGGGCAGAGTTGGGCCGTTTGATTGAAGAGGATCGGC
AGGCTAGGGATTCCATACAGAAAACGATGGAAGCCGAGCGACGGAGCCAA
CGTCTCTCGGAGCAGTCGCATCGTTCCAAGAGCCCAGCAGGAAGAACTGG
CCTGGTGACAAGTAAGCCAAGAGATAACTCCTCTGGTAATTCACCAATGG
ATGTGAACAAGCAATCAAAAGGGGATGAGAGTGGCATTCCTGGTGAAGTC
GTCAGTCCCGATAGGAACGCTCTCAATGAGAAGTCAAGCAGCGCCACTGC
ATCCGCAGTCCCACTATCATCATCCGGTGCAACGACGGCTCCTTTACTGT
CCCTCACACCCGAGAAAATACGACTATATGAAGAGGTTTTCGCCCAAGTA
CAAGAAGCAACGGGACTCACTGATATTGAAGAGATGGTCACGAAATTTCT
TGAAGCTGAAGAGAAGAATTTTTCGCTGTTTAACTATGTCAATGACCTAA
ACACGGAAATCGATGAACTGGAATCCTTCATTGGAGAGAATAAAAATGAA
ATAGAGAAAAATAAAGACCAGGGTAGCAACGCTGACTCCAGGCAGAAACG
CTTGGCCCGGGCGGGTGAAGAACGCCAGCAGCAAATCAAAGCGAAAGCGG
ATGAGTACGAGCTCAAGTACATTGCCGCCACCAAAGCCATTAATCAGCTA
AAAACGAGCATACACTCAATCTTTTCACGGTTAGGTTGTGCGACTACAAC
CCCCATGGAGGAGATTCTGGGAAACCAGGGCGTAACAGAGTCAAATATGA
TGCAATATTTGGGCTTCATCGAACAGCGTACTATCGAAATCCTTCAACTC
TATCGTGCGAGACAGAGCAGAGATGCTACTAGCTCATTAAATGAAGCCGC
TCACTCATCATCAACACCATTTCGCATTACCgtccagcctccctccctat
cggAAATAGAGCGTGACGAGGAGGCTGCGACGCAGCCGCATGCCCAAGCC
ACCAAATTCAGAGGTTATACTGTGAGTAAGACTATCAAAAGCATAAATCA
TCCATCATTTGAAGAGGATGATGCAGAAGATCGGCCCTTAACGAGGCAAG
AGTTGCAGGAAAAAGCCGTATCAAGTGCTGTGGGTAAATCGAAGCAGCAG
AAAAGCAGTATGAGGCCTTGTGATGAACGACAAGCCATTTAAATGAAAGT
CCTCGAGCAAAAACAGAAGATGGGAGGTGTAAATGCGTCAAAAGAAAATG
ACGCAATACTCGCAAAGCAAACTCAACTCCTCGAAAATCGACTAGATAAA
ACGTTGGTGAAATTTAATCAGGCTCTAGGAGAGAATAAGAGGCTTAGAGA
ACGAATCGACCGCCTACGTATGGATCGAGTTGTCTACGACAATGTTTACA
AGCGACTAGAACGATGCCTTcacgaaaagaagaaagagatggcGCAAGTT
ATAGAGGACGCAAAACGGGTCTGCGTCGCGAGGGATAAGGCAAAGAGCGA
AATTAATAATCTTAAGCAGCAGgctgaaaaagaaaaagcccAATTTCAAA
GAGAGTGGGCAGAGTTGGGCCGTTTGATTGAAGAGGATCGGCAGGCTAGG
GATTCCATACAGAAAACGATGGAAGCCGAGCGACGGAGCCAACGTCTCTC
GGAGCAGTCGCATCGTTCCAAGAGCCCAGCAGGAAGAACTGGCCTGGTGA
CAAGTAAGCCAAGAGATAACTCCTCTGGTAATTCACCAATGGATGTGAAC
AAGCAATCAAAAGGGGATGAGAGTGGCATTCCTGGTGAAGTCGTCAGTCC
CGATAGGAACGCTCTCAATGAGAAGTCAAGCAGCGCCACTGCATCCGCAG
TCCCACTATCATCATCCGGTGCAACGACGGCTCCTTTACTGTCCCTCACA
CCCGAGAAAATACGACTATATGAAGAGGTTTTCGCCCAAGTACAAGAAGC
AACGGGACTCACTGATATTGAAGAGATGGTCACGAAATTTCTTGAAGCTG
AAGAGAAGAATTTTTCGCTGTTTAACTATGTCAATGACCTAAACACGGAA
ATCGATGAACTGGAATCCTTCATTGGAGAGAATAAAAATGAAATAGAGAA
AAATAAAGACCAGGGTAGCAACGCTGACTCCAGGCAGAAACGCTTGGCCC
GGGCGGGTGAAGAACGCCAGCAGCAAATCAAAGCGAAAGCGGATGAGTAC
GAGCTCAAGTACATTGCCGCCACCAAAGCCATTAATCAGCTAAAAACGAG
CATACACTCAATCTTTTCACGGTTAGGTTGTGCGACTACAACCCCCATGG
AGGAGATTCTGGGAAACCAGGGCGTAACAGAGTCAAATATGATGCAATAT
TTGGGCTTCATCGAACAGCGTACTATCGAAATCCTTCAACTCTATCGTGC
GAGACAGAGCAGAGATGCTACTAGCTCATTAAATGAAGCCGCTCACTCAT
CATCAACACCATTTCGCATTACCgtccagcctccctccctatcggAAATA
GAGCGTGACGAGGAGGCTGCGACGCAGCCGCATGCCCAAGCCACCAAATT
CAGAGGTTATACTGTGAGTAAGACTATCAAAAGCATAAATCATCCATCAT
TTGAAGAGGATGATGCAGAAGATCGGCCCTTAACGAGGCAAGAGTTGCAG
GAAAAAGCCGTATCAAGTGCTGTGGGTAAATCGAAGCAGCAGAAAAGCAG
TATGAGGCCTTGTGATGAACGACAAGCCATTTAA back to top
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