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Properties
| Property Name | Value |
|---|
| Product | dihydroxy-acid dehydratase |
| Orig transcript id | gnl|cribi|Naga_100014g23.9324.mrna |
| Orig protein id | gnl|cribi|Naga_100014g23.9324 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:883869..886186 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4546 ID=rna4546|Name=rna4546|organism=Nannochloropsis gaditana|type=mRNA|length=744bp
ATGTTTTGTGTTTTATTAGGAGATCAAGTATCCACCATGGAAAAAATATA
CACAGACCTCATCGACGAAGTAGATGAGGCTCTTAGGATCAGGAAATTGC
CACCCTCCTCCACTGGAAATGCATCGGAGGCGACATCTCAGCTTTACTGG
ATTGGTGTTTGCGGGGCACCGGCGTCGGGAAAGTCAACTTTGACCCAAGA
GGTTGCCCGGCGACTCAATGATAAAGGAATCTCGACTGTAGTCATTCCTA
TGGATGGCTACCATTTTTATAAACACGAGCTGGATTCTATGCCTGATGCA
CATGAAATGCACGCCCGGCGCGGGGCGCCTTGGACTTTTAATGCTGTCAA
ATTTGTCCAAGATTTGACTAACGCACGTCGGACATCAATGGGATCGTTCC
CATCATTTGACCACCATTATGGGGATCCGCTTGAGGACCAGATCCAACTT
ACACCGGCACAAGAAGTAGTGATCGTTGAAGGAAATTATTTGTCTCTATC
ATCAAGTCCTTGGTGTGAGCTCAAAGGGCTCTTCGATGCTCGCTGGGTTC
TAACATGTCCTACTGAGGTGGCTCGGGAGCGCGTCATTGTGAGGCATCTT
TCCACAGGTGATACTTTGGATGAAGCTACTCGGAGGGCGGACGAGAACGA
TGTCCCCAATGGCATTATGGTTGAGAAGGAGATGTCTTCAACTGGATGGG
CGACACGAGTTATCCAGAGCATCACAGATAAACTCGATGCTTAA back to topprotein sequence of rna4546 >rna4546-protein ID=rna4546-protein|Name=rna4546|organism=Nannochloropsis gaditana|type=polypeptide|length=616bp
MRSNSALLAILGAFAWDICCTQAWILPQHRLATSSQLVLQRTSRQLMMAA
GAEGGENVLNKFSRTITQPKSQGASQAMLYATGLEPEDMAKPQVGISSVW
FEGNPCNMHLLGLAEHVKKGVVASGMVGYRFNTIGVSDGISMGTSGMSFS
LQSRDIIADSIETVMSGQWYDANIALPGCDKNMPGCLIAMGRLNRPSIMV
YGGTIRAGCSPGHEKLDIVSAFQAYGEYQYERIDETERAEIIRNACPGPG
ACGGMYTANTMATAAEALGMTLPYSSSTPADDPLKREECERAGAAVRNLL
EKDIKPRDIMTRAAFENAMVTVMALGGSTNAVLHLIAMARAVGIPLSLDD
FQACSDRVPFIADLKPSGKYVMEDVQKIGGTPAVMKYLLEKGFLDGSCMT
VTGKTMAENLKDLPSLSAGQDVILPVETPIKSTGHLQILYGNLAPGGSVA
KITGKEGERFSGVAAVFDSEEDMLAALERKEIKAGMVIVIRYEGPKGGPG
MPEMLTPTSAIMGAGLGKDVALITDGRFSGGSHGFVIGHVSPEAQEGGPI
ALIQDGDPIVIDAHADQRRMDLLISDEEMAKRKAAWKPRPYPASRGTLYK
YIKNVASASEGCVTDE back to topmRNA from alignment at CM002463.1:883869..886186+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4546 ID=rna4546|Name=rna4546|organism=Nannochloropsis gaditana|type=mRNA|length=2318bp|location=Sequence derived from alignment at CM002463.1:883869..886186+ (Nannochloropsis gaditana)
CGACTCGAGTAATTGCGGTCGACAATTCTTTACCTGCCGTTCACGGATGC
CAACCCATGATACCTCCGGCCTTGCTCTCTTCTAATAGACCACGATGACG
ACGTCTAATATGCTTGATTATGAGTATCAATAACACAAAACATAGCTTGA
AATTTCCTTTCCTGTTAACCACACGCTGCTAGTTGACGTTGCTGCTCTCC
CAAATATCGACGATACGGAAAATGTTGCCCCCTTTACCTCATGCTACACT
CTCCACAGTGACAGATGAGATCTAACTCAGCTCTTCTTGCTATACTTGGA
GCATTTGCCTGGGACATCTGTTGCACTCAGGCATGGATTCTCCCTCAGCA
TCGcctcgccacctcctcccaactTGTCTTGCAGCGGACCTCCCGCCAAT
TGATGATGGCGGCAGGTGCTGAGGGAGGTGAAAATGTTCTGAATAAGTTC
AGTCGGACCATCACACAGCCCAAAAGCCAGGGTGCTTCGCAGGCCATGCT
TTACGCCACGGGACTTGAGCCGGAGGATATGGCCAAGCCTCAGGTTGGCA
TTTCAAGCGTCTGGTTCGAGGGAAACCCTTGCAACATGCATTTGTTGGGT
CTGGCAGAGCACGTGAAAAAAGGAGTGGTTGCGTCGGGAATGGTGGGGTA
TAGATTCAACACCATCGGTGTCAGTGATGGCATCAGCATGGGTACGTCCG
GTATGTCTTTTTCGTTGCAGTCGAGGGATATTATCGCGGACTCCATTGAA
ACAGTAATGAGTGGGCAGTGGTACGACGCAAATATCGCGCTCCCAGGCTG
TGACAAGAACATGCCAGGTTGTCTGATTGCCATGGGCCGTCTAAACCGCC
CCTCTATCATGGTCTACGGGGGAACCATCCGAGCCGGTTGCTCCCCCGGG
CACGAGAAGCTGGACATTGTCTCGGCCTTTCAAGCGTATGGAGAGTATCA
GTACGAGCGCATTGACGAAACTGAGCGGGCAGAGATCATCCGGAATGCGT
GCCCCGGTCCCGGGGCGTGTGGCGGCATGTATACCGCCAACACCatggcg
acggcggcggaggcgttGGGTATGACGCTGCCAtattcttcctccacgcc
cgcggaCGATCCGCTCAAGCGGGAAGAATGCGAGCGTGCCGGTGCCGCCG
TCCGCAATTTGCTGGAAAAGGATATCAAGCCGAGGGATATCATGACACGG
GCGGCCTTCGAGAACGCGATGGTGACGGTGATGGCGTTGGGGGGGTCGAC
CAATGCGGTCCTGCACCTGATTGCCATGGCGCGCGCGGTGGGCATTCCCT
TGTCTCTGGACGACTTCCAAGCCTGCTCCGACCGCGTCCCGTTCATCGCA
GACCTGAAACCGAGCGGGAAGTACGTGATGGAGGACGTGCAGAAGATCGG
GGGGACGCCGGCGGTGATGAAATACCTGCTGGAGAAGGGTTTCTTGGACG
GCTCCTGCATGACCGTGACGGGGAAAACCATGGCCGAGAACCTGAAAGAC
TTGCCTAGCCTGAGCGCTGGCCAGGACGTGATCCTCCCGGTGGAGACTCC
CATCAAGTCCACGGGTCACCTGCAGATCCTGTACGGCAACCTGGCACCTG
GGGGGAGCGTGGCCAAGATCActggcaaggaaggagagcgttTCTCGGGC
GTCGCCGCCGTGTTCGACTCGGAAGAAGACATgttggcggccttggagcg
cAAGGAGATCAAAGCGGGGATGGTGATCGTCATCCGTTACGAAGGCCCCA
AGGGCGGTCCAGGGATGCCAGAGATGCTGACCCCCACAAGCGCGATCATG
GGAGCGGGGCTCGGGAAGGACGTGGCATTGATTACAGACGGTCGTTTTTC
GGGCGGCTCGCACGGCTTTGTGATCGGGCATGTCAGTCCCGAGGCGCAGG
AAGGTGGGCCCATCGCCTTGATCCAAGACGGGGATCCCATCGTGATCGAC
GCGCATGCCGACCAACGCCGGATGGATCTCTTGATCTCAGACGAAGAGAT
GGCGAAGCGAAAGGCGGCATGGAAACCGCGCCCGTACCCGGCCTCTCGTG
GCACGTTATACAAGTACATCAAGAATGTGGCCTCGGCCTCGGAGGGGTGT
GTGACAGATGAGTAAGGCGCCCGCCGAATGAATGACTGGGAGCAGATTGC
ATTGGATCAAATtcaaaggagaagaaaataaGGCCGCAGAAGATCCGATG
GTCCGTTCTTTTCGTTGAGACATGGCGGTAGAGTTTATCAAAGAACTAAA
ACACTTTTTGAGACCATAACGGCCGAAGGTATTGGTGGCATCGACAATGC
CTCTTCATCCGGGACGTG back to topCoding sequence (CDS) from alignment at CM002463.1:883869..886186+ >rna4546 ID=rna4546|Name=rna4546|organism=Nannochloropsis gaditana|type=CDS|length=1851bp|location=Sequence derived from alignment at CM002463.1:883869..886186+ (Nannochloropsis gaditana)
ATGAGATCTAACTCAGCTCTTCTTGCTATACTTGGAGCATTTGCCTGGGA
CATCTGTTGCACTCAGGCATGGATTCTCCCTCAGCATCGcctcgccacct
cctcccaactTGTCTTGCAGCGGACCTCCCGCCAATTGATGATGGCGGCA
GGTGCTGAGGGAGGTGAAAATGTTCTGAATAAGTTCAGTCGGACCATCAC
ACAGCCCAAAAGCCAGGGTGCTTCGCAGGCCATGCTTTACGCCACGGGAC
TTGAGCCGGAGGATATGGCCAAGCCTCAGGTTGGCATTTCAAGCGTCTGG
TTCGAGGGAAACCCTTGCAACATGCATTTGTTGGGTCTGGCAGAGCACGT
GAAAAAAGGAGTGGTTGCGTCGGGAATGGTGGGGTATAGATTCAACACCA
TCGGTGTCAGTGATGGCATCAGCATGGGTACGTCCGGTATGTCTTTTTCG
TTGCAGTCGAGGGATATTATCGCGGACTCCATTGAAACAGTAATGAGTGG
GCAGTGGTACGACGCAAATATCGCGCTCCCAGGCTGTGACAAGAACATGC
CAGGTTGTCTGATTGCCATGGGCCGTCTAAACCGCCCCTCTATCATGGTC
TACGGGGGAACCATCCGAGCCGGTTGCTCCCCCGGGCACGAGAAGCTGGA
CATTGTCTCGGCCTTTCAAGCGTATGGAGAGTATCAGTACGAGCGCATTG
ACGAAACTGAGCGGGCAGAGATCATCCGGAATGCGTGCCCCGGTCCCGGG
GCGTGTGGCGGCATGTATACCGCCAACACCatggcgacggcggcggaggc
gttGGGTATGACGCTGCCAtattcttcctccacgcccgcggaCGATCCGC
TCAAGCGGGAAGAATGCGAGCGTGCCGGTGCCGCCGTCCGCAATTTGCTG
GAAAAGGATATCAAGCCGAGGGATATCATGACACGGGCGGCCTTCGAGAA
CGCGATGGTGACGGTGATGGCGTTGGGGGGGTCGACCAATGCGGTCCTGC
ACCTGATTGCCATGGCGCGCGCGGTGGGCATTCCCTTGTCTCTGGACGAC
TTCCAAGCCTGCTCCGACCGCGTCCCGTTCATCGCAGACCTGAAACCGAG
CGGGAAGTACGTGATGGAGGACGTGCAGAAGATCGGGGGGACGCCGGCGG
TGATGAAATACCTGCTGGAGAAGGGTTTCTTGGACGGCTCCTGCATGACC
GTGACGGGGAAAACCATGGCCGAGAACCTGAAAGACTTGCCTAGCCTGAG
CGCTGGCCAGGACGTGATCCTCCCGGTGGAGACTCCCATCAAGTCCACGG
GTCACCTGCAGATCCTGTACGGCAACCTGGCACCTGGGGGGAGCGTGGCC
AAGATCActggcaaggaaggagagcgttTCTCGGGCGTCGCCGCCGTGTT
CGACTCGGAAGAAGACATgttggcggccttggagcgcAAGGAGATCAAAG
CGGGGATGGTGATCGTCATCCGTTACGAAGGCCCCAAGGGCGGTCCAGGG
ATGCCAGAGATGCTGACCCCCACAAGCGCGATCATGGGAGCGGGGCTCGG
GAAGGACGTGGCATTGATTACAGACGGTCGTTTTTCGGGCGGCTCGCACG
GCTTTGTGATCGGGCATGTCAGTCCCGAGGCGCAGGAAGGTGGGCCCATC
GCCTTGATCCAAGACGGGGATCCCATCGTGATCGACGCGCATGCCGACCA
ACGCCGGATGGATCTCTTGATCTCAGACGAAGAGATGGCGAAGCGAAAGG
CGGCATGGAAACCGCGCCCGTACCCGGCCTCTCGTGGCACGTTATACAAG
TACATCAAGAATGTGGCCTCGGCCTCGGAGGGGTGTGTGACAGATGAGTA
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