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Properties
Property Name | Value |
Product | putative methyltransferase bcdin3d |
Orig transcript id | gnl|cribi|Naga_100145g8.9672.mrna |
Orig protein id | gnl|cribi|Naga_100145g8.9672 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002463.1 | supercontig | CM002463.1:555958..557318 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4417 ID=rna4417|Name=rna4417|organism=Nannochloropsis gaditana|type=mRNA|length=1410bp ATGCCTCCTCCAACCTGCTCCAAAGAAGCTAATCGGTACAAAGTCTCACA CCTTGAAGAGCGTGATGACACAGCCTACCGGCGCGCAGAGAAACAATATC GACGCCAGCGCGTCCCCGTTAACAAACGTCGCAACCGCTTCGTCCGCCGG GACCCTGACCTCGCCCACGCGATCGACTTTGCAAAACGAGGCAGTCGGAT GGACCAGCGTGTGCTGCTTTTAGAAACGGTGGAAGGCGGTCGTGAAATTT ACAGCGTTCGTGATCGCCCTGGGTTCTACTATATACGGGGTGCCTTGACC TGGCAGGCACAAGTGCGTTGGGCACGTCGGTGCCTGACGGAATTTTCCCG CTCGCCATTCACCAACATCACGAACCACATCCGTCTCGCCCTCCGCCCGG CGCGCGACATGGAATGCCCGCATCAGTCTGGTCAAGAGGCTCTATGGGAC GCAGCAGTACGGCGGGTAGAATCTGAGGGGTGGGAAGGAGGTGACGAGGA GGACGGAGAGGAGAAGAGGACGGGTCAAGCCTTGCAACAGGCCCTTCAAG ATTTATACGCCTTGCGATGGGCTAACCTAGGTGCAAACTACATTTGGACG ACGCGGAAATACGCAGTACCTGTGAAAGAGGCCGCGAAAGAGGAGACGGG GCGGGGCGGGGGCCTGAGGGAGGGCGAGACTGTCAGGGACTCGGGAGGGC CGCATGCCACGAATAGGGACGAGGAGGGGGGTGCACAAGGCACCCCGTCT AGTGTGCACTCCCGCGTGAGGAATTTACACGAAGGAAAGGTTGGGGCGGA GGAGGTCGGGCTGCCTGAAAGAGCGGCTTTTCCGCCATCGGACGGTCTCC CCGTGCCCCAGGCGTTGACCGATTTAGCGCGGGAGGTCCTCGAGGACATT GCCCACGCGGAAAGCCACCGTCCCTGCGCCAGCAAGGGGGAGAGGGCGTT CCCTCTACCGATGAATTTCCGCGGGGAGGCAGGGATCGTAAACTATTACC CTCCGGAGAGTAGCATGGGGGGCCACGTCGACGACGCGGAGGGGGCCACG AGCGTCCCTCTCGTCTCCTTCAGCCTGGGTTTGGGCTGCGTCTTCCTTTT GGGGGGAAAGGACAAGGAGGTAGCGCCTGTGCCGCTTGTTTTCCGAAGTG GCGATTGCATGGTCATGGCGGGAGAAGCGCGTTTGGCTTTCCATGGAGTG CCCTGTATCCTGGAAGAGAGCGCCGGGCCGGATCCCGCATTGGGGCAATG GACGAGGGTGGCGGCAGTCTTGCGGGAGGATGACGGAGCAAGTCGCGCGG CGGAGGCTCGCATGCTGTCGCACTATTTGACATCCTCCAGGCTGAATTTC AACGTGAGGCAAGTCTGGAGACGGGAGCTTTGCGAGGGGGCAGAAGGCTT GCGCCCTTGA back to topprotein sequence of rna4417 >rna4417-protein ID=rna4417-protein|Name=rna4417|organism=Nannochloropsis gaditana|type=polypeptide|length=360bp MVKSPSLAHGDSKADTGSERLSSSIPKYSIAVQGGHFNGNFPHYYSFHPF ESRVAALLGIPSTCDRLALGKQNKNEAALAGILKYGDNKNGGRKRLLIAD WGCNTGRLTRELCRRLRNLSHRPVAGLGLDFDENLINRAKEESVEEEKIE GECGDVSFAAVDLVTDWARAEEIMRAFLDKDGDLGGNDDDSRPRHSRPLE SVDGREETRQGRTIKFDLLTIFSTTMWIHLVHGENALETFLRRAAEWTHC LVLEPQTQKSYKAARKRLKRAGFDPAVYFQPVTVADTSAMVMREDGKREW GFTKAINLGASSAWGRELFVYYREERHEEEEEGESDIGDASEKERPRIKD DRGRKRKSEG back to topmRNA from alignment at CM002463.1:555958..557318+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4417 ID=rna4417|Name=rna4417|organism=Nannochloropsis gaditana|type=mRNA|length=1361bp|location=Sequence derived from alignment at CM002463.1:555958..557318+ (Nannochloropsis gaditana) ACAAACAGGGAGCAGATGCGGGGTCGGGGCGGGTAACTTGCATCGACTCG
GTCAACGCCATTCCAAgcaccaacctccccccctccagcactGGCACGTA
GATGGTCAAATCTCCGTCGCTGGCTCACGGTGACAGCAAGGCGGACACTG
GGAGCGAGCGACTCTCGTCATCGATACCGAAATATTCTATTGCTGTGCAA
GGAGGGCACTTTAATGGTAATTTTCCGCATTACTACTCTTTTCATCCTTT
CGAGTCACGCGTCGCTGCCCTGCTAGGCATACCCTCCACATGCGATCGTC
TGGCTCTTGGAAAGCAGAACAAAAACGAAGCGGCGTTAGCAGGTATTCTC
AAGTATGGAGACAATAAGAACGGTGGGAGAAAACGGCTTTTAATAGCTGA
CTGGGGCTGCAATACCGGTAGGCTGACCAGAGAGCTCTGTCGCCGCCTCA
GAAATCTCTCCCACCGACCTGTGGCAGGGCTAGGCCTGGACTTTGATGAA
AATCTCATTAATAGGGCAAAAGAGGAATcagtcgaggaggagaagatagA
GGGAGAGTGTGGGGACGTATCATTTGCGGCCGTCGATCTTGTCACGGATT
GGGCTCGGGCCGAGGAGATCATGCGGGCTTTTTTAGACAAAGATGGTGAC
CTGGGAGGAAATGACGACGACTCTCGTCCAAGGCATTCAAGACCTTTGGA
AAGTGTcgatgggagagaggagactCGTCAAGGCCGAACCATCAAGTTCG
ATCTGTTGACCATATTCTCAACGACGATGTGGATCCATCTAGTCCACGGA
GAGAACGCTCTTGAAACTTTCTTGAGGCGCGCTGCGGAATGGACGCACTG
TCTGGTCTTAGAGCCCCAGACACAAAAAAGCTACAAGGCGGCTCGCAAGC
GCCTGAAACGAGCAGGATTCGACCCGGCAGTGTATTTCCAACCGGTAACG
GTCGCAGACACGTCTGCCATGGTcatgagggaggacgggaagagggagtg
ggggtTCACGAAAGCGATTAACTTGGGGGCTTCGTCAGCATGGGGCAGGG
AGCTCTTTGTGTActacagggaggagagacacgaggaggaagaggaagga
gagagcgataTCGGCGACGCgtcggagaaggagagaccGAGGATCAAGGA
CGATCGGGGGCGGAAACGTAAATCGGAAGGATAAGAAATATTacaaaatg
aaaaaaaaggtaCTCCTGGTTGGCAGTTTGCACGCGATGCACAACACACG
AGCAGAATGAGAAACATTTGCACGGCTGCTCGGATGGATGTGCGTGGCGA
AATGCATGGGAATTGTGACGTAGACGCCTGTCCGAAGAATCACCCGCTTC
GGCATATATTT back to topCoding sequence (CDS) from alignment at CM002463.1:555958..557318+ >rna4417 ID=rna4417|Name=rna4417|organism=Nannochloropsis gaditana|type=CDS|length=1083bp|location=Sequence derived from alignment at CM002463.1:555958..557318+ (Nannochloropsis gaditana) ATGGTCAAATCTCCGTCGCTGGCTCACGGTGACAGCAAGGCGGACACTGG GAGCGAGCGACTCTCGTCATCGATACCGAAATATTCTATTGCTGTGCAAG GAGGGCACTTTAATGGTAATTTTCCGCATTACTACTCTTTTCATCCTTTC GAGTCACGCGTCGCTGCCCTGCTAGGCATACCCTCCACATGCGATCGTCT GGCTCTTGGAAAGCAGAACAAAAACGAAGCGGCGTTAGCAGGTATTCTCA AGTATGGAGACAATAAGAACGGTGGGAGAAAACGGCTTTTAATAGCTGAC TGGGGCTGCAATACCGGTAGGCTGACCAGAGAGCTCTGTCGCCGCCTCAG AAATCTCTCCCACCGACCTGTGGCAGGGCTAGGCCTGGACTTTGATGAAA ATCTCATTAATAGGGCAAAAGAGGAATcagtcgaggaggagaagatagAG GGAGAGTGTGGGGACGTATCATTTGCGGCCGTCGATCTTGTCACGGATTG GGCTCGGGCCGAGGAGATCATGCGGGCTTTTTTAGACAAAGATGGTGACC TGGGAGGAAATGACGACGACTCTCGTCCAAGGCATTCAAGACCTTTGGAA AGTGTcgatgggagagaggagactCGTCAAGGCCGAACCATCAAGTTCGA TCTGTTGACCATATTCTCAACGACGATGTGGATCCATCTAGTCCACGGAG AGAACGCTCTTGAAACTTTCTTGAGGCGCGCTGCGGAATGGACGCACTGT CTGGTCTTAGAGCCCCAGACACAAAAAAGCTACAAGGCGGCTCGCAAGCG CCTGAAACGAGCAGGATTCGACCCGGCAGTGTATTTCCAACCGGTAACGG TCGCAGACACGTCTGCCATGGTcatgagggaggacgggaagagggagtgg gggtTCACGAAAGCGATTAACTTGGGGGCTTCGTCAGCATGGGGCAGGGA GCTCTTTGTGTActacagggaggagagacacgaggaggaagaggaaggag agagcgataTCGGCGACGCgtcggagaaggagagaccGAGGATCAAGGAC GATCGGGGGCGGAAACGTAAATCGGAAGGATAA back to top
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