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Properties
| Property Name | Value |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase nad-binding protein |
| Orig transcript id | gnl|cribi|Naga_100268g10.9472.mrna |
| Orig protein id | gnl|cribi|Naga_100268g10.9472 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:321347..323717 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4335 ID=rna4335|Name=rna4335|organism=Nannochloropsis gaditana|type=mRNA|length=1268bp
TCTCTTTGCGGGAGAAGTCAGTATCAGCGCATACCCCCGGTTCTCAATCG
TTCTTGCCCTCTCACTGCGCTTTTTATTCACACGTTGCAGGCCATGTGGG
CCACGGTGGGTGGGCGTGACACCATGTGGCTGTCTCGTTACGTGCTTTTT
CTTCTTTGGAGCACGACAGCCGGTGACGCCTGGGGCCCTCCGCGGTCTCC
TCTTCTTCAACGTCGGGAGCGCATGCCTTCAGGCCTCTACACTTCTCATA
CCGGTCTCGCCTACTGTTCACAACCATCCATAAAAGCCGCCAAACCATTT
GATGACGATCCTGCATGGTTTCCTTCGCCGTCTTCATTTTCTGCCACGCA
GCATGCCGGCTTTTCTCCTCCCTCCACACTTCCCGGTCCCGCCACCACGA
CCAGAGAGGCCCACGCGCTGGCGTGCCTCGATGCTTGCCCCCTTGTTGCT
GTCTTGCGGGGTGTGACGACCAAAGATATGTACGAAACCTTGCAGACACT
ACGACAGGCAGGCCTGACCATGGTCAGCGTTCCCGCGGAGTCCCCGGCTG
GCTTTGAGGGGTTGAAGGCCCTGGCATCCCTCATCTCCTCGTCTGGCGCT
GCTTCTTCCTTTTGGCCTTCCCACGCGCCCACGTCGGGAAGTGGGTGTGA
TGAGACGTTACCACCGCTGGCATTGGGCGCGGCCACGGTCGTATCTGTGG
CACAGGTGGACCTTGCCGCCGCCGCGGGGGCTTCCTTCATAAGCTGCCCC
CACACCGACCCTGATATCATATTGCGGGCCCATAAGCACGGAATCCTATG
CCTTCCAGGCATTTTGACGCCCACGGAGGCCTTTCTGGCGCTTAAACATG
GTGCAAAGGTGTTGAAACTCTTTCCTTCCCAAGCCGTACCTCCAGGCATG
GTTGCTTCTATCGCGGCAATCTTGCCCCCGCCCACGCGCTTGCTCGTTTC
GGGAGGGGTAAAGGCAGAAGACATGCCCGCCTATCGTGCAGCAGGTGCAA
AGGGCTTTGCGCTGGGATCCACGCTATTTCAAGCCGGGCTGAAGGGAGGG
GAGCTGGCCAGCCGAGCCCGGGCCTTCATCCAGGCTTTGGAAAGGGCCCC
GGACGGGGAGATGGAGGGCGAGGCCGTCCGCGGGGGATGACCACGGGGAA
ATATAGAGGGTAGAGGGTCACGAGTGTACATAAGCTGTTCTCAGATGCGC
TGTAATGATCGTCACGCAGGTGAAGCAAAATTTAATCTTTTAAATAGCGG
TTTAAAGGCTGTTCGCCG back to topprotein sequence of rna4335 >rna4335-protein ID=rna4335-protein|Name=rna4335|organism=Nannochloropsis gaditana|type=polypeptide|length=735bp
MSVAAEVFPDKRVAIIRFSNPPVNALSKKLCTRLKEAVANAQQDANIRAI
LLMSGEGLPFSGGADIKEFDNPPSRDNAEVGPLSLLIEEIESATVPTVAC
IHKYAFGGGLEVALACHYRVSMPTALLGLPEVKLGLIPGAGGTQRLPRLV
GWEAAVRMVLTGDPLPSTEAHGIGLVDAVAKGGKEAGATLQEVALTVVND
PKTGCHRRAINLPVPSNALNPLETCQTIAKKAGIKVEASDRGGEAFQGAL
EALAAAALPDPRRGLDLEARVFNRLLRSEQSKARRYVFFSERRVASDHHL
GLRGDESLVEIRHVGVVGGGTMGAGIAIAFLDAGARVTLVEVTTEALARA
HEVVQGIVASRVRRGLMSAAQAAVWASQRRFQGTLSLGDLSETDLVVEAV
FEDMALKKDIFRRLDAQCRPSTILATNTSILSIDDIAAVTRRPDRVLGMH
FFSPAHMMRLVEVVRGQASSTAVVGALAAVIKRMKKVCVAVGNCDGFVGN
RMLFSYQKELQLMVEEGADPYRIDKLLFDFGFPVGPFVMSDIAGLDVARR
IKQQRQQRKLKQSSTGRDNLSSERDSDVADKLSESSGRLGQKNGRGWYRY
DPAIGKGRTPLPDPSVQTFLEKFRRSKDLTPRNPPHTDKEILERSLFPLL
NEGIKIIEEGIAKSGSDVDIVWIYGYGFPAWRGGPMYYAEHHVGLASLLA
GLNKYAQKYPCCSHFRPAGLLQDLVRKGQGLVARL back to topmRNA from alignment at CM002463.1:321347..323717- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4335 ID=rna4335|Name=rna4335|organism=Nannochloropsis gaditana|type=mRNA|length=2371bp|location=Sequence derived from alignment at CM002463.1:321347..323717- (Nannochloropsis gaditana)
AGACAGGCAAAGGTTGCAAACAATAAAAACAGCCATGAGCGTCGCAGCTG
AAGTGTTTCCTGATAAAAGGGTAGCAATTATTCGCTTCAGTAATCCCCCC
GTTAATGCACTGAGCAAGAAGCTGTGCACGCGTCTGAAGGAAGCAGTCGC
GAATGCGCAACAAGATGCCAACATCCGGGCTATCCTTCTTATGAGTGGAG
AGGGGCTTCCATTTTCAGGAGGTGCAGATATCAAAGAGTTTGACAACCCA
CCCTCCCGCGATAATGCAGAAGTGGGACCTTTAAGTCTCTTGATCGAGGA
GATCGAAAGCGCGACCGTACCCACTGTAGCCTGCATCCATAAGTACGCAT
TTGGTGGTGGCCTTGAAGTCGCTCTCGCCTGTCATTATCGGGTATCAATG
CCTACGGCCCTTTTGGGCTTGCCCGAAGTCAAGCTTGGGTTGATTCCAGG
GGCCGGGGGGACCCAGAGGCTCCCTCGCCTGGTAGGATGGGAGGCAGCGG
TCCGCATGGTCCTGACGGGCGATCCTCTTCCCAGCACCGAGGCCCACGGT
ATTGGATTAGTGGACGCGGTGGCAAAGGGCGGGAAGGAGGCAGGGGCTAC
ATTGCAGGAGGTGGCGTTGACTGTCGTGAACGACCCGAAGACCGGATGCC
ATCGACGGGCCATCAATTTGCCCGTCCCCAGCAATGCTTTGAACCCTTTA
GAGACATGCCAAACCATCGCAAAGAAGGCAGGGATCAAGGTAGAGGCCTC
CGATCGAGGGGGGGAGGCTTTTCAGGGTGCCCTGGAGGCCCTGGCTGCGG
CGGCTCTGCCTGACCCTCGGAGAGGCTTGGATCTGGAGGCTCGGGTATTC
AATCGGCTCTTGCGCAGCGAACAATCTAAGGCGCGACGGTACGTCTTCTT
CAGCGAGCGCAGGGTTGCGTCTGATCATCACCTAGGGCTGAGAGGGGACG
AGTCCTTGGTGGAGATCAGGCACGTGGGGGTGGTGGGCGGGGGGACCATG
GGAGCGGGCATTGCCATTGCCTTTTTGGATGCGGGCGCGCGGGTGACGCT
GGTGGAGGTGACGACGGAGGCCTTGGCCAGGGCCCACGAAGTAGTGCAGG
GGATCGTAGCCTCCCGGGTCCGGCGAGGACTCATGTCGGCGGCCCAGGCC
GCGGTCTGGGCGAGCCAACGACGCTTCCAAGGCACGCTGTCGCTCGGCGA
TTTGTCCGAGACAGATCTGGTAGTGGAGGCGGTGTTTGAGGACATGGCCC
TCAAGAAGGACATTTTCCGGCGCCTGGACGCGCAGTGCCGCCCGAGCACC
ATCCTCGCCACCAACACCTCCATCCTTTCGATCGACGACATCGCAGCCGT
CACACGTCGACCCGACCGGGTTCTTGGCATGCACTTTTTCAGTCCCGCCC
ACATGATGAGGCTGGTGGAAGTGGTCCGTGGACAAGCTTCCTCCACCGCG
GTCGTCGGAGCCCTCGCCGCTGTGATCAAGCGGATGAAGAAGGTATGCGT
GGCCGTGGGGAACTGCGACGGCTTCGTCGGGAATCGGATGCTCTTCAGCT
ATCAGAAGGAGCTCCAACTGATGGTGAGTGGTCGCATGGGAGGGTCGTGG
CGCCACCTCCACTCCCCTGTGTATGCCCCTACTCGTGTCCCACCTCCGGT
CCTTTTTTTGATTGCGCGTGTTCATCGCCATCTGACCCTACGATGAACAA
AGGTGGAAGAGGGCGCCGACCCATATCGCATCGACAAGCTCCTCTTCGAC
TTTGGTTTCCCCGTCGGGCCTTTCGTCATGTCTGACATTGCTGGCCTGGA
CGTTGCCCGCCGCATCAAGCAACAACGGCAGCAACGAAAGCTGAAGCAAA
GCTCAACTGGCAGGGACAATCTTTCCTCAGAGCGTGATTCGGACGTGGCT
GACAAGCTTTCCGAGTCCAGCGGAAGGCTGGGTCAGAAAAACGGCCGCGG
GTGGTACCGTTACGATCCTGCTATAGGCAAAGGGCGCACCCCACTGCCTG
ATCCCAGTGTTCAGACTTTCCTGGAAAAATTTCGTCGTTCTAAAGATTTA
ACACCACGTAATCCTCCGCACACGGACAAGGAAATTCTTGAACGAAGCCT
TTTCCCCCTCCTAAATGAAGGCATAAAAATTATCGAAGAAGGGATCGCCA
AGTCGGGAAGTGATGTTGACATTGTCTGGATTTATGGCTACGGGTTTCCC
GCGTGGCGTGGGGGGCCTATGTACTACGCAGAGCACCATGTAGGATTGGC
CAGTCTGCTGGCAGGGTTGAACAAGTACGCTCAGAAGTACCCTTGCTGCT
CACATTTTAGGCCAGCGGGGTTGCTCCAGGACCTCGTGCGAAAGGGACAA
GGTTTAGTGGCGCGCCTATAG back to topCoding sequence (CDS) from alignment at CM002463.1:321347..323717- >rna4335 ID=rna4335|Name=rna4335|organism=Nannochloropsis gaditana|type=CDS|length=4416bp|location=Sequence derived from alignment at CM002463.1:321347..323717- (Nannochloropsis gaditana)
GTGGAAGAGGGCGCCGACCCATATCGCATCGACAAGCTCCTCTTCGACTT
TGGTTTCCCCGTCGGGCCTTTCGTCATGTCTGACATTGCTGGCCTGGACG
TTGCCCGCCGCATCAAGCAACAACGGCAGCAACGAAAGCTGAAGCAAAGC
TCAACTGGCAGGGACAATCTTTCCTCAGAGCGTGATTCGGACGTGGCTGA
CAAGCTTTCCGAGTCCAGCGGAAGGCTGGGTCAGAAAAACGGCCGCGGGT
GGTACCGTTACGATCCTGCTATAGGCAAAGGGCGCACCCCACTGCCTGAT
CCCAGTGTTCAGACTTTCCTGGAAAAATTTCGTCGTTCTAAAGATTTAAC
ACCACGTAATCCTCCGCACACGGACAAGGAAATTCTTGAACGAAGCCTTT
TCCCCCTCCTAAATGAAGGCATAAAAATTATCGAAGAAGGGATCGCCAAG
TCGGGAAGTGATGTTGACATTGTCTGGATTTATGGCTACGGGTTTCCCGC
GTGGCGTGGGGGGCCTATGTACTACGCAGAGCACCATGTAGGATTGGCCA
GTCTGCTGGCAGGGTTGAACAAGTACGCTCAGAAGTACCCTTGCTGCTCA
CATTTTAGGCCAGCGGGGTTGCTCCAGGACCTCGTGCGAAAGGGACAAGG
TTTAGTGGCGCGCCTATAGATGAGCGTCGCAGCTGAAGTGTTTCCTGATA
AAAGGGTAGCAATTATTCGCTTCAGTAATCCCCCCGTTAATGCACTGAGC
AAGAAGCTGTGCACGCGTCTGAAGGAAGCAGTCGCGAATGCGCAACAAGA
TGCCAACATCCGGGCTATCCTTCTTATGAGTGGAGAGGGGCTTCCATTTT
CAGGAGGTGCAGATATCAAAGAGTTTGACAACCCACCCTCCCGCGATAAT
GCAGAAGTGGGACCTTTAAGTCTCTTGATCGAGGAGATCGAAAGCGCGAC
CGTACCCACTGTAGCCTGCATCCATAAGTACGCATTTGGTGGTGGCCTTG
AAGTCGCTCTCGCCTGTCATTATCGGGTATCAATGCCTACGGCCCTTTTG
GGCTTGCCCGAAGTCAAGCTTGGGTTGATTCCAGGGGCCGGGGGGACCCA
GAGGCTCCCTCGCCTGGTAGGATGGGAGGCAGCGGTCCGCATGGTCCTGA
CGGGCGATCCTCTTCCCAGCACCGAGGCCCACGGTATTGGATTAGTGGAC
GCGGTGGCAAAGGGCGGGAAGGAGGCAGGGGCTACATTGCAGGAGGTGGC
GTTGACTGTCGTGAACGACCCGAAGACCGGATGCCATCGACGGGCCATCA
ATTTGCCCGTCCCCAGCAATGCTTTGAACCCTTTAGAGACATGCCAAACC
ATCGCAAAGAAGGCAGGGATCAAGGTAGAGGCCTCCGATCGAGGGGGGGA
GGCTTTTCAGGGTGCCCTGGAGGCCCTGGCTGCGGCGGCTCTGCCTGACC
CTCGGAGAGGCTTGGATCTGGAGGCTCGGGTATTCAATCGGCTCTTGCGC
AGCGAACAATCTAAGGCGCGACGGTACGTCTTCTTCAGCGAGCGCAGGGT
TGCGTCTGATCATCACCTAGGGCTGAGAGGGGACGAGTCCTTGGTGGAGA
TCAGGCACGTGGGGGTGGTGGGCGGGGGGACCATGGGAGCGGGCATTGCC
ATTGCCTTTTTGGATGCGGGCGCGCGGGTGACGCTGGTGGAGGTGACGAC
GGAGGCCTTGGCCAGGGCCCACGAAGTAGTGCAGGGGATCGTAGCCTCCC
GGGTCCGGCGAGGACTCATGTCGGCGGCCCAGGCCGCGGTCTGGGCGAGC
CAACGACGCTTCCAAGGCACGCTGTCGCTCGGCGATTTGTCCGAGACAGA
TCTGGTAGTGGAGGCGGTGTTTGAGGACATGGCCCTCAAGAAGGACATTT
TCCGGCGCCTGGACGCGCAGTGCCGCCCGAGCACCATCCTCGCCACCAAC
ACCTCCATCCTTTCGATCGACGACATCGCAGCCGTCACACGTCGACCCGA
CCGGGTTCTTGGCATGCACTTTTTCAGTCCCGCCCACATGATGAGGCTGG
TGGAAGTGGTCCGTGGACAAGCTTCCTCCACCGCGGTCGTCGGAGCCCTC
GCCGCTGTGATCAAGCGGATGAAGAAGGTATGCGTGGCCGTGGGGAACTG
CGACGGCTTCGTCGGGAATCGGATGCTCTTCAGCTATCAGAAGGAGCTCC
AACTGATGGTGGAAGAGGGCGCCGACCCATATCGCATCGACAAGCTCCTC
TTCGACTTTGGTTTCCCCGTCGGGCCTTTCGTCATGTCTGACATTGCTGG
CCTGGACGTTGCCCGCCGCATCAAGCAACAACGGCAGCAACGAAAGCTGA
AGCAAAGCTCAACTGGCAGGGACAATCTTTCCTCAGAGCGTGATTCGGAC
GTGGCTGACAAGCTTTCCGAGTCCAGCGGAAGGCTGGGTCAGAAAAACGG
CCGCGGGTGGTACCGTTACGATCCTGCTATAGGCAAAGGGCGCACCCCAC
TGCCTGATCCCAGTGTTCAGACTTTCCTGGAAAAATTTCGTCGTTCTAAA
GATTTAACACCACGTAATCCTCCGCACACGGACAAGGAAATTCTTGAACG
AAGCCTTTTCCCCCTCCTAAATGAAGGCATAAAAATTATCGAAGAAGGGA
TCGCCAAGTCGGGAAGTGATGTTGACATTGTCTGGATTTATGGCTACGGG
TTTCCCGCGTGGCGTGGGGGGCCTATGTACTACGCAGAGCACCATGTAGG
ATTGGCCAGTCTGCTGGCAGGGTTGAACAAGTACGCTCAGAAGTACCCTT
GCTGCTCACATTTTAGGCCAGCGGGGTTGCTCCAGGACCTCGTGCGAAAG
GGACAAGGTTTAGTGGCGCGCCTATAGATGAGCGTCGCAGCTGAAGTGTT
TCCTGATAAAAGGGTAGCAATTATTCGCTTCAGTAATCCCCCCGTTAATG
CACTGAGCAAGAAGCTGTGCACGCGTCTGAAGGAAGCAGTCGCGAATGCG
CAACAAGATGCCAACATCCGGGCTATCCTTCTTATGAGTGGAGAGGGGCT
TCCATTTTCAGGAGGTGCAGATATCAAAGAGTTTGACAACCCACCCTCCC
GCGATAATGCAGAAGTGGGACCTTTAAGTCTCTTGATCGAGGAGATCGAA
AGCGCGACCGTACCCACTGTAGCCTGCATCCATAAGTACGCATTTGGTGG
TGGCCTTGAAGTCGCTCTCGCCTGTCATTATCGGGTATCAATGCCTACGG
CCCTTTTGGGCTTGCCCGAAGTCAAGCTTGGGTTGATTCCAGGGGCCGGG
GGGACCCAGAGGCTCCCTCGCCTGGTAGGATGGGAGGCAGCGGTCCGCAT
GGTCCTGACGGGCGATCCTCTTCCCAGCACCGAGGCCCACGGTATTGGAT
TAGTGGACGCGGTGGCAAAGGGCGGGAAGGAGGCAGGGGCTACATTGCAG
GAGGTGGCGTTGACTGTCGTGAACGACCCGAAGACCGGATGCCATCGACG
GGCCATCAATTTGCCCGTCCCCAGCAATGCTTTGAACCCTTTAGAGACAT
GCCAAACCATCGCAAAGAAGGCAGGGATCAAGGTAGAGGCCTCCGATCGA
GGGGGGGAGGCTTTTCAGGGTGCCCTGGAGGCCCTGGCTGCGGCGGCTCT
GCCTGACCCTCGGAGAGGCTTGGATCTGGAGGCTCGGGTATTCAATCGGC
TCTTGCGCAGCGAACAATCTAAGGCGCGACGGTACGTCTTCTTCAGCGAG
CGCAGGGTTGCGTCTGATCATCACCTAGGGCTGAGAGGGGACGAGTCCTT
GGTGGAGATCAGGCACGTGGGGGTGGTGGGCGGGGGGACCATGGGAGCGG
GCATTGCCATTGCCTTTTTGGATGCGGGCGCGCGGGTGACGCTGGTGGAG
GTGACGACGGAGGCCTTGGCCAGGGCCCACGAAGTAGTGCAGGGGATCGT
AGCCTCCCGGGTCCGGCGAGGACTCATGTCGGCGGCCCAGGCCGCGGTCT
GGGCGAGCCAACGACGCTTCCAAGGCACGCTGTCGCTCGGCGATTTGTCC
GAGACAGATCTGGTAGTGGAGGCGGTGTTTGAGGACATGGCCCTCAAGAA
GGACATTTTCCGGCGCCTGGACGCGCAGTGCCGCCCGAGCACCATCCTCG
CCACCAACACCTCCATCCTTTCGATCGACGACATCGCAGCCGTCACACGT
CGACCCGACCGGGTTCTTGGCATGCACTTTTTCAGTCCCGCCCACATGAT
GAGGCTGGTGGAAGTGGTCCGTGGACAAGCTTCCTCCACCGCGGTCGTCG
GAGCCCTCGCCGCTGTGATCAAGCGGATGAAGAAGGTATGCGTGGCCGTG
GGGAACTGCGACGGCTTCGTCGGGAATCGGATGCTCTTCAGCTATCAGAA
GGAGCTCCAACTGATG back to top
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