EWM26442.1, cds4232 (CDS) Nannochloropsis gaditana

Overview
NameEWM26442.1
Unique Namecds4232
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:60171..60317 -
Alignment locationCM002463.1:59998..60056 -
Alignment locationCM002463.1:59466..59787 -
Alignment locationCM002463.1:59067..59242 -
Alignment locationCM002463.1:58746..58875 -
Alignment locationCM002463.1:58471..58587 -
Alignment locationCM002463.1:58136..58352 -
Alignment locationCM002463.1:57946..58032 -
Alignment locationCM002463.1:57591..57656 -
Alignment locationCM002463.1:57340..57440 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26442.1
Productcoproporphyrinogen iii oxidase
Orig transcript idgnl|cribi|Naga_100344g2.10762.mrna
GeneCPX2
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:60171..60317 -
CM002463.1supercontigCM002463.1:59998..60056 -
CM002463.1supercontigCM002463.1:59466..59787 -
CM002463.1supercontigCM002463.1:59067..59242 -
CM002463.1supercontigCM002463.1:58746..58875 -
CM002463.1supercontigCM002463.1:58471..58587 -
CM002463.1supercontigCM002463.1:58136..58352 -
CM002463.1supercontigCM002463.1:57946..58032 -
CM002463.1supercontigCM002463.1:57591..57656 -
CM002463.1supercontigCM002463.1:57340..57440 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004109coproporphyrinogen oxidase activity
Vocabulary: INTERPRO
TermDefinition
IPR001260Coprogen_oxidase_aer
Homology
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|585108486|gb|EWM26442.1| (coproporphyrinogen iii oxidase [Nannochloropsis gaditana])

HSP 1 Score: 981.86 bits (2537), Expect = 0.000e+0
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 0
Query:    1 MKSTWRRYYSHENFESHKRMYVKFSDQRPPCLPSWHTKIVTVESKYPSIGWGGSTLSSDHALMATDLVCVEMIRRQSKYFIKTLMQSLCLVILVCMAPYARPFLLPSTSSSSPSSLVAPLKGAHRDLNPHSTASSSSRTPSTSHGSNLSSSSPTSTFDTFASFITAIQREIIQTIETEDGTDVKFLCDEWERDGGRSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV 473
            MKSTWRRYYSHENFESHKRMYVKFSDQRPPCLPSWHTKIVTVESKYPSIGWGGSTLSSDHALMATDLVCVEMIRRQSKYFIKTLMQSLCLVILVCMAPYARPFLLPSTSSSSPSSLVAPLKGAHRDLNPHSTASSSSRTPSTSHGSNLSSSSPTSTFDTFASFITAIQREIIQTIETEDGTDVKFLCDEWERDGGRSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV
Sbjct:    1 MKSTWRRYYSHENFESHKRMYVKFSDQRPPCLPSWHTKIVTVESKYPSIGWGGSTLSSDHALMATDLVCVEMIRRQSKYFIKTLMQSLCLVILVCMAPYARPFLLPSTSSSSPSSLVAPLKGAHRDLNPHSTASSSSRTPSTSHGSNLSSSSPTSTFDTFASFITAIQREIIQTIETEDGTDVKFLCDEWERDGGRSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV 473          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|299117009|emb|CBN73780.1| (coproporphyrinogen oxidase, putative chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 379.022 bits (972), Expect = 3.280e-125
Identity = 186/341 (54.55%), Postives = 237/341 (69.50%), Query Frame = 0
Query:  134 SSSSRTPSTSHGSNLSSSSPTSTFDTFASFITAIQREIIQTIETEDGTDVKFLCDEWERDGG-RSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV 473
            ++ + TPST +     + S +  F+ FA F+   Q +I    ET DG    F  D WER+G  +  G T VLEGG  +EK A S+S+I G L+ ERA +MS+RGR   D + G   Y+AAA+SLV H+A+P +PTFR+DVRY E  G+GWFGGGADLTPYYL DGD+  FH  Y+ +CD FD +   +P++KKW D YF++P R+EHRG GGIFFDDLE +  G    GE+AGEE  +    F   VA  FMPS+LP+  RR  + F ++Q+QW L+RRGRYLEFNLLYDRGVKFGL+GGR ES+MVSAPP+ +W YNH PEEGSEE RL+ IL+ PRDWV
Sbjct:   59 NTPTATPSTENDHGGDNRSSSERFENFAEFLVKTQSDICSQAETSDGK-ATFCIDRWEREGASKGFGITRVLEGGELLEKAACSVSVIHGVLTPERAQAMSSRGRSNIDPAGGQA-YSAAAMSLVFHTASPFVPTFRADVRYLEVAGEGWFGGGADLTPYYLDDGDVEGFHRFYKDICDRFDVEA--YPRFKKWADDYFYIPMRKEHRGVGGIFFDDLERI--GDAVKGEDAGEE--KDVEAFVREVALGFMPSFLPIAERRGREPFSDKQRQWQLMRRGRYLEFNLLYDRGVKFGLSGGRVESIMVSAPPLVSWTYNHVPEEGSEEDRLVKILRKPRDWV 391          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|1109178827|gb|APF46159.1| (plastid coproporphyrinogen oxidase isoform 5, partial [Euglena viridis])

HSP 1 Score: 332.028 bits (850), Expect = 6.072e-107
Identity = 166/331 (50.15%), Postives = 212/331 (64.05%), Query Frame = 0
Query:  146 SNLSSSSPTSTFDTFASFITAIQREIIQTIETEDGTDVKFLCDEWERDGGR---SHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV 473
            S L SS   +T   FAS++  +Q  I   +E  DG+  KF  D WERD       +G T VLEGG  IEKGA ++SII+G L+ +RA SMS RGR++    +G  PY AAA+SLV H  +P +PT R+DVR FE  G  W+GGG DLTP YL + D   FH  ++G+CD  +  K  +P++KKWCD YF++P R+EHRG GGIFFDDL     G             E A  F  AV  + + S+  +V + R   + E Q+QW LLRRGRYLEFNLLYDRGVKFG+ GGR ES+MVSAPP+ AWKYN  PEEGSEE +L+  L+ PR+W+
Sbjct:   75 SKLYSSPQVTTETDFASYVNDLQAAICAEVEALDGSGKKFCIDRWERDPSNPSAGYGITRVLEGGDLIEKGAANVSIIKGVLTPQRAQSMSTRGRNIN--PEGGDPYTAAAMSLVFHPRSPLVPTLRADVRVFEVAGSKWYGGGCDLTPVYLCEEDAKHFHHYWKGVCD--EHHKDYYPRFKKWCDEYFYIPARKEHRGVGGIFFDDLSESPSG-------------EDAEPFVRAVGNAIVGSWKAIVEQSRSLPYTEEQRQWQLLRRGRYLEFNLLYDRGVKFGMEGGRVESIMVSAPPLIAWKYNVQPEEGSEELKLIETLRKPREWI 388          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|349801493|gb|AEQ18826.1| (coproporphyrinogen III oxidase [Chromera velia])

HSP 1 Score: 332.413 bits (851), Expect = 8.772e-107
Identity = 187/372 (50.27%), Postives = 234/372 (62.90%), Query Frame = 0
Query:  121 KGAHRDLNPHSTAS--SSSRTPSTSHGSNLSSSSPTSTFDTFASFITAIQREIIQTIETEDGTDVKFLCDEWERDGGRSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSAR-GRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGK-GWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEG-------GGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGG--------RFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV 473
            +G+ R L     A+     R  ++ HG +       STFD F+SF+   Q EI+  +E  DG   KF+ + W ++   S G T VLEGG  IEKGA S S I+G LS +RA +M  R G D  D   G+  Y AAALSLV HS +P +PTFR+DVRYFE +GK GWFGGGADLTPYYL D D+  FH  ++ +C+ F  +   FP  K+ CD YF+LP R+EHRG GGIFFDDL + E        GG+    E  + G   A  FT+AVA  ++ S+LP+V RRR   F +++K+W L+RRGRYLEFNLLYDRGVKFGLAG         R E+VMVSAPP   WKY H   EGSEEARL+ +LK PRDWV
Sbjct:   51 RGSRRGLGQSLFAAVLPQERGDASVHGVD-------STFDIFSSFLRRKQAEILNKLEEVDGKG-KFVREPWSQEETGSEGLTAVLEGGDVIEKGACSTSFIKGVLSVDRARAMKQRKGADGWDLKGGET-YRAAALSLVFHSRSPLVPTFRADVRYFEVEGKPGWFGGGADLTPYYLFDDDVREFHGFWKEVCNRFSPRS--FPVLKRQCDDYFYLPARREHRGVGGIFFDDLVSFESLLGTSETGGDAVEGEQSQSGSREALEFTKAVAEGWLDSWLPIVERRRGLEFTDQEKEWQLIRRGRYLEFNLLYDRGVKFGLAGPAVSTGRPVRVEAVMVSAPPEIKWKYKHEVPEGSEEARLVEVLKKPRDWV 411          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|159487561|ref|XP_001701791.1| (coproporphyrinogen III oxidase [Chlamydomonas reinhardtii] >gi|65331760|gb|AAY42146.1| coproporphyrinogen III oxidase isoform CPX2 [Chlamydomonas reinhardtii] >gi|158281010|gb|EDP06766.1| coproporphyrinogen III oxidase [Chlamydomonas reinhardtii])

HSP 1 Score: 327.02 bits (837), Expect = 1.464e-105
Identity = 157/328 (47.87%), Postives = 213/328 (64.94%), Query Frame = 0
Query:  148 LSSSSPTSTFDTFASFITAIQREIIQTIETEDGTDVKFLCDEWERDGGR---SHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDW 472
            + +SS  +TF+ F  +I  +Q+ I+ T E  +  + KF+ D WERD       +G TCVLE G  +EK A +IS+++G LSA+RA +MS+RGR   D  +G  PYAAAA+SLV HSA+P +PT R+DVR F+   + W+GGG DLTP YL   D  +FH  ++ +C  +  K  L+ + K+WCD YF++P R+EHRG GG+FFDD+   E G +                F   V    +P +LP+V R R Q F E+Q+QW LLRRGRY+EFNLLYDRG+KFGL GGR ES+MVSAPP+ AWKYN  P+ GS E  +L +L+ PR+W
Sbjct:   37 VQTSSSVATFNGFVDYIHGLQKNILSTAEDLENGERKFVVDRWERDASNPNAGYGITCVLEDGKVLEKAAANISVVRGTLSAQRAVAMSSRGRSSID-PKGGQPYAAAAMSLVFHSAHPLIPTLRADVRLFQVGDEAWYGGGCDLTPNYLDVEDSQSFHRYWKDVCGKY--KPGLYTELKEWCDRYFYIPARKEHRGIGGLFFDDMATAEAGCD-------------VEAFVREVGDGILPCWLPIVARHRGQPFTEQQRQWQLLRRGRYIEFNLLYDRGIKFGLDGGRIESIMVSAPPLIAWKYNVVPQPGSPEEEMLKVLQQPREW 348          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|302829611|ref|XP_002946372.1| (hypothetical protein VOLCADRAFT_55865 [Volvox carteri f. nagariensis] >gi|300268118|gb|EFJ52299.1| hypothetical protein VOLCADRAFT_55865 [Volvox carteri f. nagariensis])

HSP 1 Score: 321.627 bits (823), Expect = 1.816e-103
Identity = 159/331 (48.04%), Postives = 213/331 (64.35%), Query Frame = 0
Query:  146 SNLSSSSPTSTFDTFASFITAIQREIIQTIETEDGT-DVKFLCDEWERDGGR---SHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDW 472
            S     S ++ FD F  +I  +Q++I+++ E  + T   +F+ D WERD       +G TCVL+ G  +EK A +IS+++G LSA+RA +MS+RGR   D  +G  PYAAAA+SLV HSA+P +PT R+DVR F+  G+ W+GGG DLTP YL + D   FH  ++ +CD +  K  L+   K WCD YF++P R+EHRG GGIFFDDL + E G +                F   V    +PS+LP+V R R + F + Q+QW LLRRGRY+EFNLLYDRG+KFGL GGR ES+MVSAPP+ AWKYN  PE GS E  +L +L+ PR W
Sbjct:   29 STTPPPSKSAAFDDFVDYILVLQKDILKSAEDLEITRGRQFVIDRWERDAANPNAGYGITCVLDDGEVLEKAAANISVVRGTLSAQRAQAMSSRGRGSID-PRGGQPYAAAAMSLVFHSAHPLIPTLRADVRLFQVGGEAWYGGGCDLTPSYLDEQDTREFHRFWKDVCDEY--KPELYGDLKDWCDRYFYIPARKEHRGVGGIFFDDLSSNEAGFD-------------VETFVRKVGDGILPSWLPIVARHRGEPFSDSQRQWQLLRRGRYIEFNLLYDRGIKFGLDGGRIESIMVSAPPLIAWKYNVVPEAGSPEDEVLKVLQKPRAW 343          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|1109178839|gb|APF46165.1| (plastid coproporphyrinogen oxidase isoform 5, partial [Trachelomonas ellipsoidalis])

HSP 1 Score: 317.005 bits (811), Expect = 5.163e-102
Identity = 163/324 (50.31%), Postives = 210/324 (64.81%), Query Frame = 0
Query:  154 TSTFDT-FASFITAIQREIIQTIETEDGTDVKFLCDEWER---DGGRSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV 473
            T+ F T FA+++  +Q  I   +E  DG+  KF+ D WER   D    +G T V+EGGA IEKGAV++S+I+G L+ +RA SMS+RGR++     G  PY AAA+SLV+H A+P +PT R+DVR FE  G  W+GGG DLTP YL + D   FH  ++ +CD        +P++KKWCD YF++P R+EHRG GGIFFDDL     G +             A  F   V  + + S+  +V R R   F + Q+QW LLRRGRYLEFNLLYDRGVKFGL GGR ES+MVSAPP+ AWKYN  P   SEEARLL +L++PR WV
Sbjct:   15 TTAFATDFATYVNDLQTRICNELEALDGSG-KFITDRWERNPSDPAAGYGITRVMEGGAIIEKGAVNVSVIRGVLTPQRAQSMSSRGRNIN--PNGGDPYTAAAMSLVIHPASPLIPTLRADVRVFEVAGMRWYGGGCDLTPVYLSEKDAQEFHEHWKSVCDR--HHADYYPRFKKWCDEYFYIPLRKEHRGIGGIFFDDLSESPAGDD-------------AEPFVRDVGDAIVGSWRHIVERARGAPFSDTQRQWQLLRRGRYLEFNLLYDRGVKFGLEGGRVESIMVSAPPLIAWKYNVQPAPDSEEARLLEVLRSPRAWV 320          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|926793601|ref|XP_013905274.1| (coproporphyrinogen III oxidase [Monoraphidium neglectum] >gi|761976414|gb|KIZ06255.1| coproporphyrinogen III oxidase [Monoraphidium neglectum])

HSP 1 Score: 317.39 bits (812), Expect = 5.362e-102
Identity = 157/318 (49.37%), Postives = 207/318 (65.09%), Query Frame = 0
Query:  157 FDTFASFITAIQREIIQTIETEDGTDVKFLCDEWERDGGRS-HGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV 473
            F  F  ++  +Q  I+   E  DG+  KFL D W R    + +G TCVLEGG  +EK A +ISII G+LS +RA +MS+RGR   D  +G  PY+AAA+SLV H+A+P +PT R+DVR F+  G  WFGGG DLTP YL + D   FHA ++ +CD +     ++P +K WCD YF++P R+EHRG GG+FFDD+   E G +             A  F   V  + +PS+  +  RRR   + + Q+QW L RRGRYLEFNLLYDRGVKFGL GGR ES+MVSAPP+ AWKY+  P+EGS+EARLL +L+ PR+W 
Sbjct:   28 FKGFEKYVLDLQERILTEAEQLDGSGRKFLRDRWSRGSDNAGYGITCVLEGGDLLEKAAANISIIHGQLSPQRAQAMSSRGRADID-PKGGQPYSAAAMSLVFHAAHPLVPTLRADVRLFQVAGNAWFGGGCDLTPSYLFEEDAAEFHAHWKAVCDKY--APHVYPDFKAWCDKYFYIPCRKEHRGIGGLFFDDIATGEAGYD-------------AEAFVRDVGDNILPSWRAIAERRRRLPYTDSQRQWQLTRRGRYLEFNLLYDRGVKFGLDGGRVESIMVSAPPLIAWKYDVRPDEGSDEARLLDVLRQPREWA 329          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|145356082|ref|XP_001422270.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144582510|gb|ABP00587.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 315.849 bits (808), Expect = 1.202e-101
Identity = 163/323 (50.46%), Postives = 211/323 (65.33%), Query Frame = 0
Query:  157 FDTFASFITAIQREIIQTIETEDGTDVKFLCDEWER----DGGRSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDE---KKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDW 472
             D+F  F+   QRE+ + +   +G  + F  D WER    DG   +G T VLEGG   EK A ++SII+G L+AERA +MS+RGR   D S G   Y A ALSLV H  +P +PTFR+DVR F   GK W+GGGADLTPYYL + D   FH  Y  +CDA+D    +  ++   K+WCD YF++P R+EHRG GG+FFDDLE     GE + + A   GV  A  FT A+A  ++ SYLP+V RRRD+ + E Q++W   RRGRY+EFNLLYDRGV+FGL GGR E++MVSAPP   W Y+  PE GS E+RL+  L++PR W
Sbjct:    5 LDSFEDFLLDKQRELCEALAAVEGDGIGFCEDYWERGTKADG---YGLTRVLEGGRVFEKAAANVSIIRGTLTAERAKAMSSRGRQEIDPSGGQA-YEACALSLVFHPRSPMVPTFRADVRRFRVGGKAWYGGGADLTPYYLFEDDASEFHDKYEAVCDAYDSAPSEHGVYEACKEWCDEYFYIPARREHRGVGGVFFDDLET----GETSDQGARVRGVTDAEAFTRAIADEWLNSYLPIVHRRRDEPYGEAQERWHHQRRGRYIEFNLLYDRGVRFGLDGGRIEAIMVSAPPRVRWDYDVKPEPGSPESRLVDALRSPRAW 319          
BLAST of EWM26442.1 vs. NCBI_GenBank
Match: gi|1109178823|gb|APF46157.1| (plastid coproporphyrinogen oxidase isoform 4, partial [Euglena hiemalis])

HSP 1 Score: 314.694 bits (805), Expect = 1.580e-101
Identity = 157/313 (50.16%), Postives = 204/313 (65.18%), Query Frame = 0
Query:  164 ITAIQREIIQTIETEDGTDVKFLCDEWERDGG---RSHGATCVLEGGAFIEKGAVSISIIQGKLSAERAASMSARGRDLGDCSQGDVPYAAAALSLVLHSANPHLPTFRSDVRYFECQGKGWFGGGADLTPYYLHDGDIVAFHALYRGLCDAFDEKKALFPKYKKWCDSYFFLPGRQEHRGTGGIFFDDLEALEGGGEEAGEEAGEEGVERARMFTEAVARSFMPSYLPLVRRRRDQLFDERQKQWMLLRRGRYLEFNLLYDRGVKFGLAGGRFESVMVSAPPMAAWKYNHTPEEGSEEARLLAILKTPRDWV 473
            + A+Q  I   +E  DG+   F  D WERD       +G T VLEGGA +EKGA ++SII+G L+ +RA SMS+RGR   + + GD PY+AAA+SLV H  +P +PT R+DVR FE  G  W+GGG DLTP YL + D   FH  +RG+CD +  +   +P++KKWCD YF +P R+EHRG GGIFFDDL     G             E A  F  AV  + + S+  +V RRR   + E Q+QW LLRRGRYLEFNLLYDRGV+FG+ GGR ES+MVSAPP+ AW+YN  P+ G+ E  LL +L++PR+WV
Sbjct:    1 VNALQAAICAEVEVLDGSGKTFCVDRWERDPNDPSAGYGVTRVLEGGALVEKGAANVSIIKGVLTPQRAQSMSSRGRGNINPAGGD-PYSAAAMSLVFHPRSPLVPTLRADVRVFEVAGARWYGGGCDLTPAYLFEEDAAEFHRHWRGVCDEYHAE--YYPQFKKWCDEYFHIPARKEHRGIGGIFFDDLSESPAG-------------EPAEPFVRAVGNAIVQSWANIVERRRHLPYTEEQRQWQLLRRGRYLEFNLLYDRGVRFGMEGGRVESIMVSAPPLIAWQYNVQPDPGTPEQALLEVLRSPREWV 297          
The following BLAST results are available for this feature:
BLAST of EWM26442.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108486|gb|EWM26442.1|0.000e+0100.00coproporphyrinogen iii oxidase [Nannochloropsis ga... [more]
gi|299117009|emb|CBN73780.1|3.280e-12554.55coproporphyrinogen oxidase, putative chloroplast p... [more]
gi|1109178827|gb|APF46159.1|6.072e-10750.15plastid coproporphyrinogen oxidase isoform 5, part... [more]
gi|349801493|gb|AEQ18826.1|8.772e-10750.27coproporphyrinogen III oxidase [Chromera velia][more]
gi|159487561|ref|XP_001701791.1|1.464e-10547.87coproporphyrinogen III oxidase [Chlamydomonas rein... [more]
gi|302829611|ref|XP_002946372.1|1.816e-10348.04hypothetical protein VOLCADRAFT_55865 [Volvox cart... [more]
gi|1109178839|gb|APF46165.1|5.163e-10250.31plastid coproporphyrinogen oxidase isoform 5, part... [more]
gi|926793601|ref|XP_013905274.1|5.362e-10249.37coproporphyrinogen III oxidase [Monoraphidium negl... [more]
gi|145356082|ref|XP_001422270.1|1.202e-10150.46predicted protein, partial [Ostreococcus lucimarin... [more]
gi|1109178823|gb|APF46157.1|1.580e-10150.16plastid coproporphyrinogen oxidase isoform 4, part... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4242rna4242Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications