EWM26497.1, cds4176 (CDS) Nannochloropsis gaditana

Overview
NameEWM26497.1
Unique Namecds4176
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1058158..1058607 -

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Properties
Property NameValue
Protein idEWM26497.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102527g1.7373.mrna
GbkeyCDS
End range.
End range1058607
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1058158..1058607 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26497.1 vs. NCBI_GenBank
Match: gi|585108554|gb|EWM26497.1| (hypothetical protein Naga_102527g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 279.256 bits (713), Expect = 7.986e-95
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0 
Query:    1 RSRLRALPLSLRRRLPPVSDFLLQDMCRERCGLPCLGVLSRPFLPVGLSDLLRLLLHYLPGASGPQRPPLPLPHHHASGHSRCACVLRPDILAGVCLCVLDLRRSGPRELVQKLRQHGGLGGLPRDDAGGRRSALSPRQYVTLLSPHAV 149
            RSRLRALPLSLRRRLPPVSDFLLQDMCRERCGLPCLGVLSRPFLPVGLSDLLRLLLHYLPGASGPQRPPLPLPHHHASGHSRCACVLRPDILAGVCLCVLDLRRSGPRELVQKLRQHGGLGGLPRDDAGGRRSALSPRQYVTLLSPHAV
Sbjct:    1 RSRLRALPLSLRRRLPPVSDFLLQDMCRERCGLPCLGVLSRPFLPVGLSDLLRLLLHYLPGASGPQRPPLPLPHHHASGHSRCACVLRPDILAGVCLCVLDLRRSGPRELVQKLRQHGGLGGLPRDDAGGRRSALSPRQYVTLLSPHAV 149
The following BLAST results are available for this feature:
BLAST of EWM26497.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108554|gb|EWM26497.1|7.986e-95100.00hypothetical protein Naga_102527g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4186rna4186Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications