EWM26500.1, cds4173 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|585108560|gb|EWM26500.1| (sodium-dependent phosphate transport protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 475.322 bits (1222), Expect = 2.314e-169 Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0 Query: 1 MHATLPPPSLPPAFPPSLSPPSPLRPSGGCGGGAWSPPSSVGEPGQRPLERLREQPRPLGRHVRAHGRKEGREGGREGGREGMREGRRIRIRRSRLGGEGLDRRVSISAHYLAIVPLPLPFVLPFHPSHPDASLPILQAHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTALVRGSPNLSQGQPPSPKRDG 240 MHATLPPPSLPPAFPPSLSPPSPLRPSGGCGGGAWSPPSSVGEPGQRPLERLREQPRPLGRHVRAHGRKEGREGGREGGREGMREGRRIRIRRSRLGGEGLDRRVSISAHYLAIVPLPLPFVLPFHPSHPDASLPILQAHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTALVRGSPNLSQGQPPSPKRDG Sbjct: 1 MHATLPPPSLPPAFPPSLSPPSPLRPSGGCGGGAWSPPSSVGEPGQRPLERLREQPRPLGRHVRAHGRKEGREGGREGGREGMREGRRIRIRRSRLGGEGLDRRVSISAHYLAIVPLPLPFVLPFHPSHPDASLPILQAHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTALVRGSPNLSQGQPPSPKRDG 240
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|299116817|emb|CBN74929.1| (Similar to transporters, possibly for inorganic phosphate [Ectocarpus siliculosus]) HSP 1 Score: 99.3673 bits (246), Expect = 2.956e-20 Identity = 49/87 (56.32%), Postives = 60/87 (68.97%), Query Frame = 0 Query: 138 QAHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTALVRG 224 AHN+GLYVLLAWLPTYF Q + L L+QSS SV PW+ A+ N+AG GAD L+ ++ VRKLFQ AL+ PAACM L +G Sbjct: 459 MAHNWGLYVLLAWLPTYFVQEFNLTLEQSSGASVLPWVVGAVAGNMAGSGADLLVKKGMLEVKWVRKLFQTVALVGPAACMLLLAQG 545
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|760446985|ref|XP_011400561.1| (Sodium-dependent phosphate transport protein 1, chloroplastic [Auxenochlorella protothecoides] >gi|675355138|gb|KFM27578.1| Sodium-dependent phosphate transport protein 1, chloroplastic [Auxenochlorella protothecoides]) HSP 1 Score: 85.1149 bits (209), Expect = 2.326e-15 Identity = 42/84 (50.00%), Postives = 56/84 (66.67%), Query Frame = 0 Query: 140 HNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTALVR 223 HN+G ++LL W+P+Y++Q GLDL+ S SV PWI AI +N+ GW ADTLI + V+ TTVRK+ Q L PA +T L R Sbjct: 310 HNWGTFILLTWMPSYYNQVLGLDLRASGFFSVLPWITMAISANIGGWLADTLI-ARGVSVTTVRKVMQTIGFLGPAFFLTQLGR 392
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|922386068|ref|XP_003594358.2| (anion transporter 4 [Medicago truncatula] >gi|657397199|gb|AES64609.2| anion transporter 4 [Medicago truncatula]) HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 0 Query: 139 AHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTAL 221 HN+G ++LL W+PTY++Q +L +S +L V PW+ A+ +N+ GW ADTL+ S+ V+ TTVRK+ Q L PA +T L Sbjct: 91 CHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLV-SKGVSITTVRKIMQSIGFLGPAFFLTQL 172
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|926787376|ref|XP_013902162.1| (Sodium-dependent phosphate transport protein 1, chloroplastic [Monoraphidium neglectum] >gi|761972791|gb|KIZ03143.1| Sodium-dependent phosphate transport protein 1, chloroplastic [Monoraphidium neglectum]) HSP 1 Score: 82.8037 bits (203), Expect = 1.661e-14 Identity = 46/117 (39.32%), Postives = 74/117 (63.25%), Query Frame = 0 Query: 116 PLPLPFVLPFHPSHPD-ASLPILQAHNY---GLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTALVRGSPNL 228 P+P F LP+ + A + ++ AH+ G Y++L+WLP+++S + LD+ S+ LS+ PW+A+A+VS +GW ADTL+N+ +T T RKL Q + +L+PAAC+ L L Sbjct: 391 PMPSLFKLPWRRFLTNRAFIGLMCAHSMFGSGHYIILSWLPSFYSDVFHLDVSSSATLSIFPWVASAVVSASSGWIADTLVNNGTLTTTQTRKLMQSAGMLLPAACLLVLADAQDGL 507
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|124360884|gb|ABN08856.1| (Putative transporter C20orf59 homolog, related [Medicago truncatula]) HSP 1 Score: 79.337 bits (194), Expect = 1.723e-14 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 0 Query: 139 AHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTAL 221 HN+G ++LL W+PTY++Q +L +S +L V PW+ A+ +N+ GW ADTL+ S+ V+ TTVRK+ Q L PA +T L Sbjct: 39 CHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLV-SKGVSITTVRKIMQSIGFLGPAFFLTQL 120
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|159472424|ref|XP_001694351.1| (major facilitator superfamily protein [Chlamydomonas reinhardtii] >gi|158277014|gb|EDP02784.1| major facilitator superfamily protein [Chlamydomonas reinhardtii]) HSP 1 Score: 81.6481 bits (200), Expect = 2.458e-14 Identity = 35/66 (53.03%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 140 HNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKL 205 HN+GL++LL W+P Y++Q GL+L QS +LSV PW+A A+++N+AGW AD L+ V+ TTVRK+ Sbjct: 214 HNWGLFILLTWMPAYYNQVLGLNLTQSGLLSVLPWVAQAVMANVAGWAADNLVERG-VSITTVRKV 278
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|552838555|ref|XP_005849602.1| (hypothetical protein CHLNCDRAFT_143059 [Chlorella variabilis] >gi|307109262|gb|EFN57500.1| hypothetical protein CHLNCDRAFT_143059 [Chlorella variabilis]) HSP 1 Score: 82.0333 bits (201), Expect = 2.537e-14 Identity = 39/82 (47.56%), Postives = 53/82 (64.63%), Query Frame = 0 Query: 140 HNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTAL 221 HN+G ++LL W+PTY++Q GLDLK S SV PW+ AI +N+ GW ADTL+ + T+VRK+ Q L PA +T L Sbjct: 362 HNWGTFILLTWMPTYYNQVLGLDLKSSGFFSVLPWVTMAISANVGGWIADTLVERG-WSVTSVRKIMQTIGFLGPAFFLTQL 442
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|926784452|ref|XP_013900700.1| (putative anion transporter 2 [Monoraphidium neglectum] >gi|761971010|gb|KIZ01681.1| putative anion transporter 2 [Monoraphidium neglectum]) HSP 1 Score: 81.2629 bits (199), Expect = 4.577e-14 Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 0 Query: 139 AHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTAL 221 HN+G+++LL W+PTY++Q GLD+ S + SV PW+ ++ +N GW ADT++ S V TTVRK+ Q L PA ++ L Sbjct: 384 CHNWGVFILLTWMPTYYNQVLGLDIMSSGLFSVLPWVTMSVTANFGGWLADTMV-SRGVAVTTVRKVMQSVGFLGPAFFLSQL 465
BLAST of EWM26500.1 vs. NCBI_GenBank
Match: gi|658007318|ref|XP_008338835.1| (PREDICTED: ascorbate transporter, chloroplastic-like isoform X1 [Malus domestica]) HSP 1 Score: 81.2629 bits (199), Expect = 5.496e-14 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 0 Query: 139 AHNYGLYVLLAWLPTYFSQTYGLDLKQSSVLSVAPWIAAAIVSNLAGWGADTLINSEVVTKTTVRKLFQCSALLIPAACMTALVR 223 HN+G ++LL W+PTY++Q +L +S +L V PW+ AI +N+ GW ADTL+ S+ + TTVRK+ Q L PA +T L R Sbjct: 428 CHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLV-SKGFSVTTVRKIMQSIGFLGPAFFLTLLSR 511 The following BLAST results are available for this feature:
BLAST of EWM26500.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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