EWM26509.1, cds4165 (CDS) Nannochloropsis gaditana

Overview
NameEWM26509.1
Unique Namecds4165
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1040867..1041017 +
Alignment locationCM002462.1:1041160..1041265 +
Alignment locationCM002462.1:1041481..1041635 +
Alignment locationCM002462.1:1041807..1042039 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26509.1
Productl-ascorbate peroxidase
Orig transcript idgnl|cribi|Naga_101473g1.2501.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1040867..1041017 +
CM002462.1supercontigCM002462.1:1041160..1041265 +
CM002462.1supercontigCM002462.1:1041481..1041635 +
CM002462.1supercontigCM002462.1:1041807..1042039 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006950response to stress
GO:0042221response to chemical
GO:0008152metabolic process
GO:0006979response to oxidative stress
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0004601peroxidase activity
GO:0020037heme binding
Vocabulary: INTERPRO
TermDefinition
IPR010255Haem_peroxidase
IPR002207Asc_peroxidase
IPR002016Haem_peroxidase_pln/fun/bac
Homology
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|585108576|gb|EWM26509.1| (l-ascorbate peroxidase [Nannochloropsis gaditana])

HSP 1 Score: 439.499 bits (1129), Expect = 5.050e-156
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0
Query:    1 MARMKQHQLRHHHVLRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            MARMKQHQLRHHHVLRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR
Sbjct:    1 MARMKQHQLRHHHVLRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|553183113|ref|XP_005853842.1| (hypothetical protein NGA_0439800, partial [Nannochloropsis gaditana CCMP526] >gi|422295222|gb|EKU22521.1| hypothetical protein NGA_0439800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 183.341 bits (464), Expect = 1.371e-56
Identity = 91/92 (98.91%), Postives = 91/92 (98.91%), Query Frame = 0
Query:   46 MQGRKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAIND 137
            MQ RKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAIND
Sbjct:    1 MQARKGRVFMNQASDDCDRRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAIND 92          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|299116878|emb|CBN74988.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 146.362 bits (368), Expect = 1.275e-38
Identity = 74/145 (51.03%), Postives = 104/145 (71.72%), Query Frame = 0
Query:   72 AVLSSF-FALSLSSTPPA-RASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            +V +SF   L+L+ +P A +ASV F+ +RYGDKELKIATVNKL+Q++RN++  D  LA   ++LAI D +G+DA+T  GGPDGS+  E+DR+    LKPA++   K+K+ +Q TNE+T  DV +  GA AI + GGP + VQLGR
Sbjct:   70 SVAASFGLGLALAVSPEAAQASVNFETERYGDKELKIATVNKLRQQIRNSLLEDPKLAPEMLKLAIADALGFDASTQTGGPDGSVVLELDREVAKSLKPAVDNAFKIKKNLQRTNEMTLADVISMGGAEAIHACGGPPMLVQLGR 214          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|873220454|emb|CEM35639.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 135.191 bits (339), Expect = 3.920e-35
Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 0
Query:   88 ARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            A+A V FD  RYGDKELKIATVNKLKQ +  AI     LA   VRLAI++ + Y AAT EGG DGSI  E+D+ +NA ++ A+E L +++++I+ TNEVTF D+ ++AGA AIE  GGPR   QLGR
Sbjct:    3 AQAVVQFDRGRYGDKELKIATVNKLKQTVGLAITEKPHLAGQLVRLAISNALSYVAATGEGGLDGSIREEVDQPENADVREAVELLERIRKDIKRTNEVTFADLLSYAGAEAIELVGGPRFSPQLGR 129          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|545710284|ref|XP_005707450.1| (ascorbate peroxidase [Galdieria sulphuraria] >gi|452823924|gb|EME30930.1| ascorbate peroxidase [Galdieria sulphuraria])

HSP 1 Score: 126.716 bits (317), Expect = 4.612e-31
Identity = 68/167 (40.72%), Postives = 102/167 (61.08%), Query Frame = 0
Query:   52 RVFMNQASDDCDRRSLLSAGAVLSS---FFALSLSSTP-PARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            R++MN   +   RR+ LS   V +S       SL+  P    A V FD DRYGDKEL I+T+N+LKQ LRN ++ +L L   +++LA++D + Y   T +GG +GS+ FEM R  NA L    ++   ++   QS ++V +GD  AFAG+VA++  G PR+ +Q+GR
Sbjct:   60 RIWMNH--NKVSRRTFLSKALVYTSVGGLLTTSLTKFPLYCDAEVFFDIDRYGDKELTISTINRLKQTLRNTLSKNLDLLPQYIQLALHDALSYSKQTKKGGLNGSLRFEMQRPGNAFLSSCYQS---IEEAHQSYSDVGYGDYIAFAGSVALDIVGAPRVKLQVGR 221          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|551657576|ref|XP_005831559.1| (hypothetical protein GUITHDRAFT_152902 [Guillardia theta CCMP2712] >gi|428175691|gb|EKX44579.1| hypothetical protein GUITHDRAFT_152902 [Guillardia theta CCMP2712])

HSP 1 Score: 122.094 bits (305), Expect = 2.484e-29
Identity = 67/151 (44.37%), Postives = 91/151 (60.26%), Query Frame = 0
Query:   64 RRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            RR+ L +   L     L+L+    A A V FD +RYGDKELK++T+NK+KQ+ R        L V   RLA+ D + +DA T E GPDGS+   +    +  LK A E + ++K E+    ++T  D+ AFAGAVAIE+TGGPR  VQLGR
Sbjct:   59 RRTFLKSALTL----PLTLAVGQRAGAEVFFDTERYGDKELKVSTINKVKQQFRALYEKKPELLVPLFRLAMEDALSFDAGTRENGPDGSVLQRVGGPGSEYLKEAAEEVRRIKSELNRQTQLTSADIIAFAGAVAIEATGGPRTVVQLGR 205          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|544209916|ref|XP_005535360.1| (cytosolic ascorbate hydrogen peroxidase [Cyanidioschyzon merolae strain 10D] >gi|449015672|dbj|BAM79074.1| cytosolic ascorbate hydrogen peroxidase [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 106.301 bits (264), Expect = 2.710e-23
Identity = 63/159 (39.62%), Postives = 92/159 (57.86%), Query Frame = 0
Query:   68 LSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEMDRDQN------------AGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            LS G +L+    L     P A A V FD +RYGDKE++++T+N+LKQ LRN ++    L   FVRLA+ D   +D +T  GG + SI + + + Q             +GL+ AL+ L  ++  I+   EV++ D  A+AG VA+E TGGPR+ VQ GR
Sbjct:   92 LSTGCLLAQTETLRDGQLPIAHAFVDFDVNRYGDKEIRVSTLNRLKQNLRNVLSQSPHLLEPFVRLALADAFTFDESTQVGGSNASIRYVLAKLQENGPRKTASAPGLSGLQEALKALEPIRPFIK---EVSWADTIAYAGVVAMELTGGPRLRVQNGR 247          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|1210530082|dbj|GAX11264.1| (hypothetical protein FisN_7Lh361 [Fistulifera solaris])

HSP 1 Score: 103.605 bits (257), Expect = 2.089e-22
Identity = 58/158 (36.71%), Postives = 93/158 (58.86%), Query Frame = 0
Query:   64 RRSLLSAGAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEM-------DRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            RR+ ++ G +       +  +T  A A V FDP  YGD+EL+++ V+ +K+++R AI  + SLA SF  L++ DG+ Y A T++ GPDG+I F++         +    L+ A   +L+ ++ ++  N ++  D  A AGA AIES GGP + VQLGR
Sbjct:   35 RRNWIN-GCIFGGGGVGAFIATTKANAQVFFDPAMYGDQELRVSAVDSVKERVRRAILENPSLAPSFYHLSLLDGLSYQAKTDKYGPDGTILFQVLGQKAPASDEYMTNLQKAAVVILETEKFLRQKNAISLPDAVAIAGAEAIESVGGPILVVQLGR 191          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|219124941|ref|XP_002182751.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406097|gb|EEC46038.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 103.605 bits (257), Expect = 2.270e-22
Identity = 73/207 (35.27%), Postives = 116/207 (56.04%), Query Frame = 0
Query:   15 LRAACLLLLVSITGIAAFKLPYSHSNFVQNHMQGRKGRVFMNQASDDCDRRSLLSA--GAVLSSFFALSLSSTPPARASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSI-----AFEMDRDQNAGLKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            L+AA L +L+S+T   AF+ P+  S+F       R  R+ M       DRR   +A  G   ++ +  +++ TP A A V FDP  YGD+EL++  V+ +++ +R AI  +  LA SF +LA+ DG+ +D+ T + GPDGSI     + + D      L+ A  TL++ ++ ++    +T  D  A  G+ +IES GGP + VQLGR
Sbjct:    5 LKAAPLAVLLSLTSTLAFQSPHPLSSFTS----ARNSRLAM-------DRRGFGNALVGTTAATLWNANIAVTP-ANAQVFFDPAMYGDQELRVGAVDSVRESVRRAILKNPQLAPSFYQLALLDGLSFDSKTQKYGPDGSILKVVLSTKADDAYTKNLQQACLTLIEAEKNLRKKVAITIADAIAIGGSQSIESIGGPVLAVQLGR 199          
BLAST of EWM26509.1 vs. NCBI_GenBank
Match: gi|1072229407|gb|OEU14142.1| (putative ascorbate peroxidase, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 98.2117 bits (243), Expect = 1.366e-21
Identity = 52/130 (40.00%), Postives = 81/130 (62.31%), Query Frame = 0
Query:   90 ASVAFDPDRYGDKELKIATVNKLKQKLRNAIAGDLSLAVSFVRLAINDGIGYDAATNEGGPDGSIAFEM--DRDQNAG---LKPALETLLKVKREIQSTNEVTFGDVCAFAGAVAIESTGGPRIPVQLGR 214
            A V FDP+ YGD+EL++ TV+ ++++ R AI    +LA +F +LA+ DG+ ++A  ++ GP+G + + +   +D N     LK A E L+  +R ++    V+  D  A AGA AIES GGP + VQLGR
Sbjct:   75 AEVFFDPEMYGDQELRVGTVDTVRERTRRAILQTPALAPAFYQLALLDGLSFNAVNDKFGPNGGVIYAVLNSKDNNENLDKLKMAAEVLIDTERALRRKTAVSIADCVAIAGAEAIESIGGPVLTVQLGR 204          
The following BLAST results are available for this feature:
BLAST of EWM26509.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108576|gb|EWM26509.1|5.050e-156100.00l-ascorbate peroxidase [Nannochloropsis gaditana][more]
gi|553183113|ref|XP_005853842.1|1.371e-5698.91hypothetical protein NGA_0439800, partial [Nannoch... [more]
gi|299116878|emb|CBN74988.1|1.275e-3851.03conserved unknown protein [Ectocarpus siliculosus][more]
gi|873220454|emb|CEM35639.1|3.920e-3555.91unnamed protein product [Vitrella brassicaformis C... [more]
gi|545710284|ref|XP_005707450.1|4.612e-3140.72ascorbate peroxidase [Galdieria sulphuraria] >gi|4... [more]
gi|551657576|ref|XP_005831559.1|2.484e-2944.37hypothetical protein GUITHDRAFT_152902 [Guillardia... [more]
gi|544209916|ref|XP_005535360.1|2.710e-2339.62cytosolic ascorbate hydrogen peroxidase [Cyanidios... [more]
gi|1210530082|dbj|GAX11264.1|2.089e-2236.71hypothetical protein FisN_7Lh361 [Fistulifera sola... [more]
gi|219124941|ref|XP_002182751.1|2.270e-2235.27predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072229407|gb|OEU14142.1|1.366e-2140.00putative ascorbate peroxidase, partial [Fragilario... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4175rna4175Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications