EWM26638.1, cds4055 (CDS) Nannochloropsis gaditana

Overview
NameEWM26638.1
Unique Namecds4055
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:763034..764839 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26638.1
Productabc subfamily abcg
Orig transcript idgnl|cribi|Naga_100001g48.8149.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:763034..764839 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0016887ATPase activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR013525ABC_2_trans
IPR003439ABC_transporter-like
IPR003593AAA+_ATPase
Homology
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|585108726|gb|EWM26638.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 1241.48 bits (3211), Expect = 0.000e+0
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 0
Query:    1 MNTEGNVRHANGEEKGVVSVGIRHTLEWHVEAYMVPAGKKGEFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNATAS 601
            MNTEGNVRHANGEEKGVVSVGIRHTLEWHVEAYMVPAGKKGEFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNATAS
Sbjct:    1 MNTEGNVRHANGEEKGVVSVGIRHTLEWHVEAYMVPAGKKGEFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNATAS 601          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|585106190|gb|EWM24668.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 692.96 bits (1787), Expect = 0.000e+0
Identity = 331/537 (61.64%), Postives = 416/537 (77.47%), Query Frame = 0
Query:   63 MGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNAT 599
            MGPSG GKTTLLECISLRNR+F+GAVH+D R P G+ FT SVLVHQKELLFGFMTPRE+L FH +ARM   HT  QI+ R++EVL ++KLEKCADT+VGGTDP + +KGLSGGERKRL+IA E+LLAP +IFLDEPSSGLDSVMSESIF +LKDL   GRIV+ASVHCPSSE CQ F+H++LLT+DGR+AYHG     I YFS+L Y CPE+YNP+DFYLKLIS TPGA+   E  RM+ L  A+  SDM    PL  D  H+    V G  AS++T  K+N WRA ++L+RD    VLWG++S +VG L GI+Y QQA ++WRNLLGLLFS+VVA++F  SL V+MRFP +WAI+VRE +SG NA+GPYL A F    PM YGPFLL+T++YWMTGMD +   ++ FA  ++S + A   +GQ+VSS S NP +G+TILPAFVAPMIMFSG+LY++S+VP WLSW+  +S++NYSFSALM +QIHILP+  A L+  F++LN ++ G ++  LWIM+    +LTY  L++RLR AT
Sbjct:    1 MGPSGAGKTTLLECISLRNRKFEGAVHYDNRGPTGEFFTCSVLVHQKELLFGFMTPREHLLFHAIARMSKNHTIEQINARVEEVLQEVKLEKCADTIVGGTDPIYMRKGLSGGERKRLSIAAELLLAPQLIFLDEPSSGLDSVMSESIFGTLKDLTQSGRIVVASVHCPSSEMCQQFTHVLLLTFDGRLAYHGRQDAAIRYFSSLSYQCPENYNPSDFYLKLISATPGADPAQEKARMNQLVAAYNASDMVRKTPLAPDETHKQFQMVFG-HASSWTLFKINLWRAFIQLQRDWVTFVLWGLVSALVGGLFGILYWQQARSNWRNLLGLLFSVVVANLFTSSLAVMMRFPLDWAIVVREYFSGSNAIGPYLVARFIVDAPMGYGPFLLITLLYWMTGMDSDIGKFVIFALTFISGNWASTSMGQYVSSFSANPFIGLTILPAFVAPMIMFSGILYERSSVPAWLSWLQTLSIVNYSFSALMIQQIHILPKPLALLVMQFVELNPDTMGWDIGMLWIMNFGFQILTYINLSLRLRFAT 536          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|585110259|gb|EWM27919.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 675.241 bits (1741), Expect = 0.000e+0
Identity = 328/618 (53.07%), Postives = 432/618 (69.90%), Query Frame = 0
Query:   18 VSVGIRHTLEWHVEAYMVP-----AGKKGEFRN-------ILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARME---------------HTHTRAQ-----------IDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYF-SALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLR 596
            ++V I+H LEWHVE++ V      A  KG           ILQ +AG   SG+LTAI+GPSG GKTTLLECISLRNR FDG V +DG+AP G  FT+S  VHQ ++L+GF+TPRE+LTFH +ARM                   +R Q           + +R++EV++ +KLEKCADTL+GG+DP F  KG+SGGERKRL IA E+L    +IFLDEPSSGLDSVMSESIFQ+LKDL   GRIV+A+VHCPSS+   LFS+L+LLT DGR+AY GP  Q + YF +AL   CP+HYNPADF L+L+S  PG   + E++RMD L+ A+ +S M++  PLP D+KH+ L  V G  AS + F KLN WR  L+L RD+  ++LW  +S ++G L G++Y Q A ++WRNL+GL+FS VV ++F G LGV+MRFP EW ++VRE  SG NAVGPY+ A F+  LP++YGP L+ +++YW TGMDP+   YL F  I++SF+ +C  LGQ++SS S NP+V MTI+P FV PMIMFSG+L ++S+VPVWL+W+  VS++NY+F  LMA+Q+HILP NQ  ++  FI  N    G NV  LWI++AA  +LTY  L VRLR
Sbjct:   21 LAVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|553189117|ref|XP_005854935.1| (atp-binding cassette [Nannochloropsis gaditana CCMP526] >gi|422294123|gb|EKU21423.1| atp-binding cassette [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0
Identity = 328/617 (53.16%), Postives = 431/617 (69.85%), Query Frame = 0
Query:   19 SVGIRHTLEWHVEAYMVP-----AGKKGEFRN-------ILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARME---------------HTHTRAQ-----------IDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYF-SALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLR 596
            +V I+H LEWHVE++ V      A  KG           ILQ +AG   SG+LTAI+GPSG GKTTLLECISLRNR FDG V +DG+AP G  FT+S  VHQ ++L+GF+TPRE+LTFH +ARM                   +R Q           + +R++EV++ +KLEKCADTL+GG+DP F  KG+SGGERKRL IA E+L    +IFLDEPSSGLDSVMSESIFQ+LKDL   GRIV+A+VHCPSS+   LFS+L+LLT DGR+AY GP  Q + YF +AL   CP+HYNPADF L+L+S  PG   + E++RMD L+ A+ +S M++  PLP D+KH+ L  V G  AS + F KLN WR  L+L RD+  ++LW  +S ++G L G++Y Q A ++WRNL+GL+FS VV ++F G LGV+MRFP EW ++VRE  SG NAVGPY+ A F+  LP++YGP L+ +++YW TGMDP+   YL F  I++SF+ +C  LGQ++SS S NP+V MTI+P FV PMIMFSG+L ++S+VPVWL+W+  VS++NY+F  LMA+Q+HILP NQ  ++  FI  N    G NV  LWI++AA  +LTY  L VRLR
Sbjct:   22 AVKIQHKLEWHVESFKVQIRRSRAPGKGTASTTTQTTKTILQKVAGCAVSGELTAILGPSGAGKTTLLECISLRNRNFDGCVQYDGQAPEGRFFTLSAFVHQADMLYGFLTPREHLTFHAIARMSGGSRTAARGLPEPGASQTSRGQSWQAEKMSSESMARRVEEVIATVKLEKCADTLIGGSDPVFNVKGISGGERKRLTIATELLQTNEIIFLDEPSSGLDSVMSESIFQTLKDLTTQGRIVIATVHCPSSKTYHLFSNLILLTCDGRLAYSGPAAQALSYFQAALGIECPQHYNPADFVLELVSAEPGVPLQEELRRMDALSLAYAQSFMKIQNPLPADDKHKALHDVRGQGASDWVFFKLNLWRGGLQLARDRITLILWAAVSALIGALFGVLYWQLAASNWRNLMGLIFSAVVGNVFTGCLGVVMRFPMEWTLVVREFSSGANAVGPYMIARFFTTLPLSYGPVLMSSIIYWCTGMDPDAGTYLIFVLIFVSFNWSCFSLGQWISSFSANPLVAMTIMPGFVTPMIMFSGLLIERSSVPVWLAWIEDVSVVNYAFDTLMAQQMHILPGNQGEVVQQFIQFNPRKMGWNVGMLWILTAAFQVLTYVNLRVRLR 638          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|585109266|gb|EWM27089.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 474.937 bits (1221), Expect = 2.131e-157
Identity = 263/596 (44.13%), Postives = 372/596 (62.42%), Query Frame = 0
Query:   24 HTLEWHVEAYMV------PAGKKG-EFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRI-VLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSA-LKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRM---DLLNDAFQKS---DMRLMK------PLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQANLLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNA 598
            + L WH+ ++ V      P  K+  + ++IL  +AG++  G++TAIMG SG GKTTLLEC++LR+R+F G V ++G A  GD FT S LVHQ+E+L GF+T  E+L FHG ARM    +  +I+ R++ V+ D+ L KC  TLVGG      KKGLSGGERKRL IA E+LL P  IFLDEP++ LDSVM+  +   L+ LA   RI V+A++H PSS+   LFSH++LLT DGR+A+HG     + Y S+ LK   P+ YNPAD  ++L+   PG  A    +R    D L  +F  S   D  L +          +N HR L GV G  AS +T  +LN  R  L+  R+     L+G++  ++GL  G +Y QQA +SWRNL+GLL++LVVA ++M  L VI+R P +W +++RE ++G NA GPYL A     LP AYGP LLV  +YWMTG+ P+  A+L+FAG+      A   +   V SLS NPM+ + ILPAF+ PM++FSG LY  +T+P +L+W+  +S++NY F+AL+  Q  +LP     +   F++++  + G N+L L  M+     LTY  LT+RLR A
Sbjct:   40 NQLTWHIRSFKVGSQRCWPWTKRSIQRKSILTDVAGQSVGGEITAIMGASGAGKTTLLECLALRSRQFKGRVTWNGEAVRGDYFTASALVHQREVLCGFLTVEEHLLFHGTARMSDRFSPKEIEARVRNVIEDVGLSKCRKTLVGGPGAPQNKKGLSGGERKRLTIATELLLCPQAIFLDEPTTSLDSVMAGHVVALLRQLALSRRILVMATIHAPSSQIFSLFSHVLLLTNDGRLAFHGTISNALLYASSCLKRPLPDAYNPADHLVRLVVSKPGGGASAREERRKENDWLVQSFAASAYGDPELPERGSHRDKACEENSHRSLRGVQGQHASAWTLFRLNLRRGLLQTSRNSLSFWLYGMVMGVIGLCFGTLYFQQAASSWRNLVGLLYALVVALLYMCPLTVILRAPLDWPLLLREYFAGANAAGPYLLAKILYELPFAYGPLLLVAFLYWMTGLTPSLAAFLQFAGVVALTTQASCAMALMVGSLSANPMLTLGILPAFITPMVLFSGFLYDTATLPSYLAWLPKISIVNYGFAALITLQQSLLPAELRGVALKFVNVDPEALGANLLMLTGMTVIFYALTYMFLTLRLRTA 635          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|585109183|gb|EWM27013.1| (white [Nannochloropsis gaditana])

HSP 1 Score: 447.203 bits (1149), Expect = 7.470e-147
Identity = 234/587 (39.86%), Postives = 360/587 (61.33%), Query Frame = 0
Query:   21 GIRHTLEWHVEAYMVPAGKKGEFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGG-----RIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDK-TFVVLWGIISFIVGLLLGIIYLQQAPASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPENQAN-LLAAFIDLNKNSAGLNVLYLWIMSAALLLLTYFTLTVRLRNATA 600
            G  H L+++V  +  P GK+     IL  IAG+T +G+ TA+MGPSG GKTTL++CI+LR R F+GA+H DGR+P  D FT +  VHQKEL F  +T RE+L FH + R+   +T+ Q  +R+ EV+++++L +CADT++GG + F   KGLSGGERKRL+I  E+L  P +IFLDEP+SGLDSVM E +   L  LA G      R+++  +H PSS     FSH++LL   G +AYHG       YF +L Y  P +YNPADF L+++S  PGAE +G+     + N A +      + P    +   G+A   G  A      K+N WRA  +  RDK T   L G++  I+G++ G+++L QA +SWRNL+G++F+LVVA + + S+ V ++FP EW+I +RE Y+G NA+GPY        +P      LLV V YWM+G+  +F +++++  I+          G   SS S +P++G+ I P    PMI+FSG+LY++S+VP++L W+ ++S++NY F+AL+  + + L +     L+  F+ ++    G  + +L+ ++      ++  L +R+R AT+
Sbjct:   47 GEDHVLDFNVSNFSTPKGKQ-----ILHDIAGRTVTGEFTALMGPSGAGKTTLMDCIALRQRSFEGAIHVDGRSPKSDYFTQTGYVHQKELFFSSLTSREHLVFHAINRLGGKYTKDQCMKRVDEVINEVELARCADTIIGGGE-FALVKGLSGGERKRLSIGTELLSHPKIIFLDEPTSGLDSVMGELVTNLLAALATGKNGGPRRVIMCVIHTPSSRMWSHFSHVLLLATGGFMAYHGTREALFPYFKSLGYDVPPNYNPADFALEVVSAKPGAEVQGKTAVWIVENFAKRMEKFNRLPPETNHHTFTGVATSGGTGAGYLLQTKMNIWRAVTQSSRDKGTLYALVGML-LILGMVFGLLFLNQAHSSWRNLMGMMFALVVAVLILCSMNVALKFPVEWSIFMREYYTGANALGPYFIGRTIADIPFLALFLLLVIVPYWMSGLTASFASFIRYCFIFFLIINGSASTGYLASSFSADPVLGLAITPVIDTPMILFSGMLYERSSVPLYLKWIQNISVVNYGFAALVINECNSLGDGPMRWLVLHFLQIDLGMFGACIGWLFGLALGYRFASFLVLKLRIRYATS 626          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|585106124|gb|EWM24607.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 372.474 bits (955), Expect = 3.138e-117
Identity = 213/575 (37.04%), Postives = 329/575 (57.22%), Query Frame = 0
Query:    6 NVRHANG----EEKGVVSVGIRHTLEWHVEAYMVPAGKKGEFRNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGG--RIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLIS---FTPGAEAEGEVQRMDL-------------------LNDAFQKSDMRLMKPLPTDNKHRGLAGVHGIKASTFTF-LKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAP-ASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQI-HI 549
            +V+  NG    +++  VS   R  LEW++  Y +   K+     +L+ IAG+ E+G   A+MGPSGCGKT+LL+C++LR R F+G++  +G+A  G  F  +  VHQKEL F  +T RE+L FH L  +    +  +   R++ V+ ++ L K  D  +GG D  +   G+SGGERKRL IA E+L  P ++ LDEP+SGLDSVM E +   LK +A     R+VLA++H PSS    L SH+ LLT  G +AY GP  + + +   L Y CP ++NPADF L+L S       A A G V   +L                   L  A + +  R + PL  +N+H+ + GV G  AS +    + N WR+ L  RR+   + +  +++  +GL+ G++Y QQ P  + RN  G LFSL+V  +   S+ V M FP ++AI++RE Y+GVN+   Y         P +    ++  + Y+M G+ P+ VA+  +  ++   + A   +G   SS S NP+VG++ILP F+ PMI+FSG+LY++++VP  L W+  +S++NYSF+ ++  Q+ HI
Sbjct:   51 DVKTENGRLIVDDRESVSTCARVVLEWNISKYEIKLKKRKSL-TVLRSIAGRAENGSFNAVMGPSGCGKTSLLQCLALRTRDFEGSLTLNGKALTGAYFAHTGYVHQKELFFPHLTVREHLVFHALNHLSRHKSLEECIARVEAVMEEVDLTKVGDQKIGGGD-LYLVAGISGGERKRLNIATELLGNPRILLLDEPTSGLDSVMGELVCLLLKSIAVQAPRRLVLAAIHTPSSRVFTLVSHVTLLTSHGELAYWGPRDKLLLFLEGLGYRCPSYFNPADFILELASAKVIAGQAGAPGGVGGQELASPGNVSGSLLVESTSSGKLVAACKSTLSRDLAPLGVNNRHKEVVGVQGPGASNWAVSFRTNLWRSWLSQRREYVGLAVAVLMNTALGLVFGVLYFQQIPHDNGRNTAGYLFSLLVTLLIASSIAVCMNFPFDFAILMREYYAGVNSPLGYFLGRTLASEPPSLAFMIMGILPYFMVGLAPSAVAFGWYCLLFFIVNFAAQSIGYLASSFSANPVVGLSILPLFITPMILFSGMLYERNSVPPSLRWIQDISVMNYSFALMVLNQVGHI 623          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|585102173|gb|EWM21831.1| (abc subfamily abcg [Nannochloropsis gaditana])

HSP 1 Score: 320.857 bits (821), Expect = 6.571e-97
Identity = 177/514 (34.44%), Postives = 284/514 (55.25%), Query Frame = 0
Query:   44 RNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKS-----DMRLMKPLPTDN---KHRGLAGVHGIKASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPA--SWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMA-YGPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQ 546
            + IL  +AG  +SGQ+ A+MG SG GK+T L+C+SLRN++F G V+ +G+      + ++  V+Q++L    MT RE+LTFH + RM       +  +R+++VL ++ +  C +T++GG  P    +G+SGGE+KRLA   E+L  PS++F DEP+SGLDS M+  +  ++++LAD G+I++  +H PSS+   LF+HL+LL   GR+ Y+GP      YFS+L   CP  +NPADF++  IS  P  E E  + R+  L DA++ S     +M     +P +    KH+ ++  H   AST+T       R      R  T V    + S ++G++LG IY  Q     S +N++GL F +++    +   GV+  FPSE  + +RE  SG N V  Y  A     LP     P +   ++Y M  + P    +  +    +        +G  +SS++ +  V   + P F+ PM +F+G+L   +T+PVWL W+   S+I Y +  L+  Q
Sbjct:  146 KEILSNVAGSVKSGQMMAVMGSSGAGKSTFLDCVSLRNQQFSGNVYINGKPADEKYYFMTGFVYQEDLFIPTMTVREHLTFHAMVRMNSDIPVEKRLERVEDVLMEVAMSHCPETIIGG--PGTGYRGISGGEKKRLAFGTELLNNPSIVFADEPTSGLDSFMTRGVCMTMRELADDGKIIMCVIHQPSSQTFDLFTHLLLLA-KGRIVYNGPMATLQSYFSSLGVICPHFHNPADFFINQISIVP-TEQEASMARLQSLWDAYENSNLAAGNMAWKAEMPAEILNLKHKAVSMKH-FHASTWTQFYYTMKRNIQNEFRRATDVKAKFMNSLVMGMILGTIYFGQTDTQESAKNIMGLFFLIIMFQTMVSMFGVLQAFPSECKVFIRENLSGANRVSSYFLARTLSELPSTIIYPSIFAAIVYGMADLQPTAGRFYFYIFTIILVANCATSVGYMISSMTSHEAVAYALAPLFLMPMALFAGLLLDLNTIPVWLRWLDFFSIIKYGYQLLIINQ 654          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|585102296|gb|EWM21944.1| (white [Nannochloropsis gaditana])

HSP 1 Score: 311.612 bits (797), Expect = 3.403e-94
Identity = 175/529 (33.08%), Postives = 296/529 (55.95%), Query Frame = 0
Query:   44 RNILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNRRFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHT---HTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDAFQKSDMR------LMKPLP---TDNKHRGLAGVHGIKASTFTFLKLNFW----RATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQAPA--SWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAY-GPFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQIHILPEN 553
            + IL+G+ G   SG + A+MG SG GK++LL+CISLRN++F+G V  DG+      F ++  V+Q +L F  +T RE+L FH + RM  T   H +A+   R++ +L D+ L+ C+D L+GG       +G+SGGERKR+A+A E+L  P+++FLDEP+SGLDS M+E++   L+ LA+ G+IV+  +H PSS+  +LF+HL LL   GR+AY G   + + YF+AL + CP ++NPADF+++ ++  P ++ E  + R+ ++ DA+Q SD+R      L K  P   +  + R    +    A+  T     FW    R  L+ +R+        + S ++G+LLG++Y  Q     + +N +G+ F + +      + GV+   P ++A+ +RE  +G N V  Y  A     +P     P +  +++Y M G+ P   AY+ F  + +      + +G  +S++  N    +      + PM +FSG+L     +  WL  +  +S+I Y++ A++  +    P N
Sbjct:   67 KTILEGVTGSVRSGNMMALMGASGAGKSSLLDCISLRNQKFEGNVFVDGKPADNAFFGLTAYVYQDDLFFPTLTVREHLRFHAMVRMPKTVQPHIKAE---RVESILLDVGLQGCSDALIGGASSLI--RGISGGERKRVAVATELLSNPAILFLDEPTSGLDSFMAEAVCTLLRKLANTGKIVVCVIHQPSSDTFKLFTHLCLLA-KGRMAYLGELPKAVDYFAALGHACPPNFNPADFFIEELAVVP-SDYEKSMARLRVVTDAYQDSDLRKQNEKWLSKVDPAVLSKPRRRTGIAITEYPATADT----QFWESCRRTILQYKREPVLTRARLVNSILMGVLLGLVYFDQDTTYKAVQNKIGVAFIVTMNQCISATFGVVQEVPRDFAVFMREYLAGANRVSSYFLARTLSEIPFQILFPLVFGSIVYGMVGLRPTAGAYITFCLVLILCANTAVSMGYALSAVFRNTTAAIAAGSVVIMPMALFSGLLLDMDNIAPWLRPLQFLSIIRYTYHAIIINEYANQPIN 584          
BLAST of EWM26638.1 vs. NCBI_GenBank
Match: gi|291244253|ref|XP_002742012.1| (PREDICTED: protein white-like [Saccoglossus kowalevskii])

HSP 1 Score: 290.426 bits (742), Expect = 1.360e-85
Identity = 180/564 (31.91%), Postives = 293/564 (51.95%), Query Frame = 0
Query:   11 NGEEKGVVSVGIRHTLEWHVEAYMVPAGKKGEFRN----------ILQGIAGKTESGQLTAIMGPSGCGKTTLLECISLRNR---RFDGAVHFDGRAPGGDAFTVSVLVHQKELLFGFMTPREYLTFHGLARMEHTHTRAQIDQRIQEVLSDMKLEKCADTLVGGTDPFFQKKGLSGGERKRLAIAYEMLLAPSMIFLDEPSSGLDSVMSESIFQSLKDLADGGRIVLASVHCPSSEACQLFSHLMLLTYDGRVAYHGPTLQGIGYFSALKYFCPEHYNPADFYLKLISFTPGAEAEGEVQRMDLLNDA-----FQKSDMRLMKPLPTDNKHRGLAGVHGI------KASTFTFLKLNFWRATLRLRRDKTFVVLWGIISFIVGLLLGIIYLQQA--PASWRNLLGLLFSLVVADIFMGSLGVIMRFPSEWAIIVRECYSGVNAVGPYLFASFWGILPMAYG--PFLLVTVMYWMTGMDPNFVAYLKFAGIYLSFDIACLELGQFVSSLSGNPMVGMTILPAFVAPMIMFSGVLYQKSTVPVWLSWMHHVSLINYSFSALMAEQ 546
            NG +  V+    + +L W       P  K+  F+           IL+ ++G  E G L A+MG SG GK+TL+  ++ RNR     +G V  +G+  G    + S  V Q++L FG +  RE+L F  L RM+    +    +R++EV+ ++ L KCA+T++G  +P    KG+SGGE KRL+ A E+L  P ++F DEP+SGLDS M++S+  +L+ LA  GR +L ++H PSSE   +F  ++L+  +GR A+ G T   + +FS + + CP +YNPADFY++ ++  PG E +   ++++ L DA     F K     MKP    ++ +GL   H I      KAS F   +   WR  L   R+   + +  + + I+ L++G+++LQQ     S +N+ G LF  +    F     VI  FP E  + +RE ++G+     Y        LP  +   P +   + YWM G+ P FV +   AGI +      +  G  +S+ S +  V + I P  + P+++F G+    S +PV+  W+ ++S   Y +  L   Q
Sbjct:   68 NGRKTSVLLPTEQLSLTWCDIEVTAPPPKRKWFKKQDPKTLLPKRILRRVSGYVEPGTLLAVMGASGAGKSTLMNVLTYRNRGNLTVEGHVMINGQPVGRSIASSSAYVQQEDLFFGNLRVREHLIFQALLRMDSHIPKKGRMERVEEVIRELGLSKCANTIIG--NPARGIKGISGGEMKRLSFASEVLTNPPLMFCDEPTSGLDSFMAQSVVATLQHLAAQGRTILCTIHQPSSEVYAMFDRVLLMA-EGRNAFLGSTSDALRHFSNIGHTCPTNYNPADFYIQKLAIEPGKEQQCR-EKVEKLCDAYDQSIFAKEVYDKMKP----SESKGLLEDHNIKSRSPYKASWFAQFRAVMWRTYLDNSREPMIIRVRTVQTVIIALIIGLVFLQQPYDQDSIQNINGCLFLFITNMTFANLFAVIQVFPLELPVFLREHFNGMYRTDVYFICKNLVELPYQFIILPIVFTAITYWMVGLYPYFVNFCICAGILVLVCNVSVSFGYMISTFSPSVSVALAIAPPLIVPLLLFGGLFLNTSDIPVYFIWLQYISWFKYGYECLTVNQ 623          
The following BLAST results are available for this feature:
BLAST of EWM26638.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108726|gb|EWM26638.1|0.000e+0100.00abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585106190|gb|EWM24668.1|0.000e+061.64abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585110259|gb|EWM27919.1|0.000e+053.07abc subfamily abcg [Nannochloropsis gaditana][more]
gi|553189117|ref|XP_005854935.1|0.000e+053.16atp-binding cassette [Nannochloropsis gaditana CCM... [more]
gi|585109266|gb|EWM27089.1|2.131e-15744.13abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585109183|gb|EWM27013.1|7.470e-14739.86white [Nannochloropsis gaditana][more]
gi|585106124|gb|EWM24607.1|3.138e-11737.04abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585102173|gb|EWM21831.1|6.571e-9734.44abc subfamily abcg [Nannochloropsis gaditana][more]
gi|585102296|gb|EWM21944.1|3.403e-9433.08white [Nannochloropsis gaditana][more]
gi|291244253|ref|XP_002742012.1|1.360e-8531.91PREDICTED: protein white-like [Saccoglossus kowale... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4065rna4065Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications