EWM26631.1, cds4052 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|585108719|gb|EWM26631.1| (NAD(P)-binding domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 973.77 bits (2516), Expect = 0.000e+0 Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0 Query: 1 MQPKEIKRTSHPLAQRYCVRSHGMEETLGATAATIHGALSKPDGKTARKETLLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADYEAHLGTGKRSESLGQRCNSRAAQTTTCGGHGCNFLHGSCHDAPPANYQYDLRPMGPGGGHPRGRPLQGFPYPSLVATTMGTIRGVEYVESEEKMPHKAQTNDVQYCTERDSLRGRRWKCTAVVGLIVNVKYKLEWTASASRIQ 463 MQPKEIKRTSHPLAQRYCVRSHGMEETLGATAATIHGALSKPDGKTARKETLLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADYEAHLGTGKRSESLGQRCNSRAAQTTTCGGHGCNFLHGSCHDAPPANYQYDLRPMGPGGGHPRGRPLQGFPYPSLVATTMGTIRGVEYVESEEKMPHKAQTNDVQYCTERDSLRGRRWKCTAVVGLIVNVKYKLEWTASASRIQ Sbjct: 1 MQPKEIKRTSHPLAQRYCVRSHGMEETLGATAATIHGALSKPDGKTARKETLLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADYEAHLGTGKRSESLGQRCNSRAAQTTTCGGHGCNFLHGSCHDAPPANYQYDLRPMGPGGGHPRGRPLQGFPYPSLVATTMGTIRGVEYVESEEKMPHKAQTNDVQYCTERDSLRGRRWKCTAVVGLIVNVKYKLEWTASASRIQ 463
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|585108794|gb|EWM26706.1| (retinol dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 291.967 bits (746), Expect = 1.358e-91 Identity = 148/292 (50.68%), Postives = 191/292 (65.41%), Query Frame = 0 Query: 30 ATAATIHGALSKPDGKTARKETLLSQLNSFLSAD-YVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320 +T I A SKP+ K E LLS+LN+FL ++ YV YY +W FWLF+P V ++ LYD T KG RKP GPVLITGC SGFG L +AL+ GW VYA + F+ N V LI+DVT EE VRA A VD +P+EGLYALVNNAG + +GTTDWC +++++ HM++N++G +R+ K ALPLLKR R ++RI+NI S SGLLPGL +K Y ASKHAAE+WSNSLR E+RHF IQV VNP WH T A ++ L+ ++ + +Q DY Sbjct: 9 STTVDIPSAPSKPEEK---HEPLLSRLNNFLHSNIYVYIITYYLYWLGFWLFIPVVAFFTMLGFGLYDLFTAKGFRKPCGPVLITGCSSGFGLDLTMALAAQGWKVYACVRREADMAPFSNNPNVKGLILDVTNEEQVRAAFATVDGENPEEGLYALVNNAGFEHYGTTDWCSLDYFKVHMDVNYYGPIRVTKAALPLLKRYGRGGS-AAARIININSTSGLLPGLPLKGGYSASKHAAEAWSNSLRQEMRHFNIQVTVVNPSWHDTRCALPPKEKLLAVFRAAPPAVQEDY 296
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|585108707|gb|EWM26619.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 221.476 bits (563), Expect = 4.772e-64 Identity = 110/281 (39.15%), Postives = 172/281 (61.21%), Query Frame = 0 Query: 36 HGALSKPDGKTAR-KETLLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAK--NG--KVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAG---VDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRI 308 H + S P + R +++++S+LN F+ DY++D +YGFW FW+FMP V+L G + +A+YD +T +G R+P GPVL+TGCD+GFG+ LALAL+E W V A C T GV + + NG + + +D++ +++++A + A +P EGLYALVNN V + G +W +++Y+ HME+N + +R K LPLLK+ R RI+ + S +G++PG S Y +KHA ++W +SL E +GI+ V P WH +I + Q D R+ Sbjct: 11 HASTSLPSTRPRRTRQSIISKLNDFVHRDYITDIVFYGFWLGFWVFMPPVILLGTLLLAVYDLITARGYRQPCGPVLVTGCDTGFGKALALALAERHWKVIAACSTDTGVKSYREPANGSMNIDPIKLDLSNDDEIQACAELLAAQYP-EGLYALVNNNNNTVVGKDGLVEWMTIDNYKMHMEVNLYAFIRATKAFLPLLKKYTRQASRCKPRIVTLNSNAGIVPGQPNASCYAVAKHACDAWMSSLTFEANVWGIEAATVCPCWHEIDIDYFQHDVFARL 290
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|585111089|gb|EWM28666.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 182.956 bits (463), Expect = 8.688e-50 Identity = 110/284 (38.73%), Postives = 166/284 (58.45%), Query Frame = 0 Query: 52 LLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVT--------CKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKN-GKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY-EAHLG 325 L++ N+ D YY F+F W + P +LG +VF L+DA T + + V V+ITGCD+GFG+ LAL L + G+ VYA+C+T K + +I+DVTKE+ V +V A++ AAHP +G++ALVNNAGV R G DW ++ +R+ ME+N+F V + K LP LK++ RI+ ++S +G+ G + AY +SKHA E ++++LR ELR +GI V +NP +HRTEI H+ L +E ++Q +Y E +LG Sbjct: 3 LINWANNVAHIPVFEDMCYYNFFFWAWFWGP--LLGALVF--LHDATTGFFFSIFYVEPSEDKV--VVITGCDTGFGKSLALDLGKKGFKVYASCLTQRSADELKKECDALQTIILDVTKEDQVASVAARISAAHP-QGIFALVNNAGVSRAGLIDWLNMSDFRFCMEVNYFSVVSVTKAFLPSLKKS-------KGRIIMMSSAAGVACGYPVTCAYSSSKHALELFASALRQELRTWGITVSTINPGFHRTEINHNAAGALKATFEKAPREIQEEYGEEYLG 272
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|585106696|gb|EWM25060.1| (serine threonine-protein kinase dclk3 [Nannochloropsis gaditana]) HSP 1 Score: 184.882 bits (468), Expect = 5.864e-47 Identity = 107/277 (38.63%), Postives = 154/277 (55.60%), Query Frame = 0 Query: 52 LLSQLNSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIV--FMALYDAVTCKGNRKPVG-PVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKN-----GKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320 +L+ +N + V D A++ + FV L P LG ++ + L +P G VLITGCD+GFG LA+AL + GW VYA C+T V G + +++MDVTK+ D+ V+ ++ PK+ L+A+V NAGV R G DW + YR ME+N F + K LPLLK + RI+N+TS +G+ G SAY ASKHAAE++S SLR EL +GI+V VNP +HRT I+ + + + + Y+ L QA+Y Sbjct: 1210 MLNLMNDIMHLPIVDDIAWHLYHFVRLLLGPLWALGLLISFLVKLLSGALVTRLEQPKGRAVLITGCDTGFGYDLAIALVKKGWRVYAGCLTQAAVAELKTKAAGSAGSMVSVLMDVTKQADIDRVVEQIAKESPKQ-LFAVVCNAGVGRGGLVDWTPLATYRAIMEVNLFAMIATCKACLPLLKES-------KGRIVNVTSMAGIFLGAPCMSAYAASKHAAEAFSTSLRFELEGWGIRVVTVNPSFHRTRISTNAAETVKQAYDDLDAKTQAEY 1478
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|585111118|gb|EWM28695.1| (retinol retinaldehyde reductase [Nannochloropsis gaditana]) HSP 1 Score: 173.711 bits (439), Expect = 3.724e-46 Identity = 106/273 (38.83%), Postives = 156/273 (57.14%), Query Frame = 0 Query: 57 NSFLSADYVSDWAYYGFWFVFWLFMPYVVLGGIVFMALYDAVTCKGNRKP---VGP-----VLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYF-AKNGKVTALIMDVTKEEDVRAVMAKVDAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320 N+ D + +W +Y ++ WL P++ + +YD C G P V P + ITGCD+GFGR LA+ L++ G+ VYA C+T +GV A+ V +++DVT E V+ A+VDA +P EGLYALVNNAGV + G DW + +R+ ME+NFFG V + K LPL+KR RI+ ++S +G+ G + + Y ASKHA E +++SLR ELR +GI+V +NP +HRTE+ L + + +QA Y Sbjct: 9 NNLCHIDLLEEWIWYSYFTGAWLLGPFMAF----LIVVYD--FCSGFAFPLWHVEPSRDKAIFITGCDTGFGRSLAVRLAQKGFRVYAACLTANGVEEIKAECSTVETMMLDVTDENQVQEAAARVDAENP-EGLYALVNNAGVAKSGLIDWFGLSDFRFCMEVNFFGVVSVTKAFLPLIKRC-------KGRIVVVSSVAGVSCGYPLSAPYSASKHAVELFASSLRQELRAWGIKVSTINPGFHRTEMNKVAVKGLETCWSKVDPVIQAQY 267
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|1210512056|dbj|GAX28911.1| (17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+) [Fistulifera solaris]) HSP 1 Score: 149.058 bits (375), Expect = 7.951e-37 Identity = 84/232 (36.21%), Postives = 125/232 (53.88%), Query Frame = 0 Query: 95 YDAVTCKGNRKPVGPVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAK-NGKVTALIMDVTKEEDVRAVMAKV-----DAAHPKEGLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320 Y A KG+ V+ITGCD+GFGR +AL +E G+ V+A C+ + V + + + A M+VT +E V V + + L+AL+N AGV G D+ + ++ M++NFFG VR K LP+ K A N Y+ +RILNI S +GL+P SAY ASK+A + +S + R+E FGIQV +NP +H T I + ++ L G + +Y Sbjct: 68 YSACDPKGHPTRESAVVITGCDTGFGRDVALRAAEAGYIVFAGCLKEESVTERNQLSNNIKAFTMNVTNDEHVEKAAQMVSRWLDETTTQQRILHALINMAGVGFCGNVDFMPLNLFQTSMDVNFFGTVRCCKAFLPIFKSQATSNTYNDARILNIVSMAGLVPTSVGTSAYAASKYAVQGFSTAFRLEAMGFGIQVATINPSFHETNIVTGLSTQVEKLCADLPGAKREEY 299
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|196000450|ref|XP_002110093.1| (hypothetical protein TRIADDRAFT_21854 [Trichoplax adhaerens] >gi|190588217|gb|EDV28259.1| hypothetical protein TRIADDRAFT_21854 [Trichoplax adhaerens]) HSP 1 Score: 141.739 bits (356), Expect = 8.793e-36 Identity = 77/220 (35.00%), Postives = 126/220 (57.27%), Query Frame = 0 Query: 110 VLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAK--NGKVTALIMDVTKEEDVRAVMAKVDAAHPKE-GLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQ--RDHLVRIYESLSGDLQADYEAHL 324 +LITGCDSGFG LA L +G +V+A C+T GV A+ + +V +MDVT+++D+ + + AA P++ G++A+VNNAG+ R G DW +E Y+ ++N +G V + K +P++ R R +N+ S SG+LP +M AY SK AAE ++ LR E+ F +QV + P R+ + Q ++ ++YE+L + +Y+ Sbjct: 9 ILITGCDSGFGNLLAKRLDLIGCHVFAACLTQQGVTQLAQSTSSRVKTFMMDVTQQQDIENAYSMIKAALPEDRGIWAVVNNAGILRTGLIDWMPMEEYKKVADVNLWGMVAVTKRFIPMVIR-------EQGRFVNVVSLSGVLPYEYM-GAYTISKFAAEGFTGVLRREMAPFNVQVSSIKPGVFRSSLVSPQPLLQNVQKMYENLPPETLENYDEEF 220
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|1210525164|dbj|GAX16098.1| (17beta-estradiol 17-dehydrogenase / 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+) [Fistulifera solaris]) HSP 1 Score: 144.436 bits (363), Expect = 3.592e-35 Identity = 83/230 (36.09%), Postives = 124/230 (53.91%), Query Frame = 0 Query: 99 TCKGNRKPVG--PVLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAK-----NGKVTALIMDVTKEEDVRAVMAKVDAAHPKEG-LYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEIAHSQRDHLVRIYESLSGDLQADY 320 +C R P V+ITGCD+GFGR +AL +E G+ V+A C+ + V + N + +DV E+ V V +D ++ L+ALVN AGV G D+ + ++ M++NFFG VR K LP+ K A N Y+ +RILN+ S +GL+P SAY ASK+A + +S + R+E FGIQV +NP +H T I + ++ L G + +Y Sbjct: 70 SCDPKRHPTRELAVVITGCDTGFGRDVALRAAEAGYTVFAGCLKDESVTELNQLSSNINSFTMNVTIDVHVEKAVHIVSQWLDETTTQQRILHALVNMAGVGFCGNVDFMPLNLFQTSMDVNFFGTVRCCKAFLPIFKSQATSNTYNDARILNMVSMAGLVPTSVGTSAYAASKYAVQGFSTAFRLEAMGFGIQVATINPSFHETNIVTGLSTQVEKLCADLPGAKREEY 299
BLAST of EWM26631.1 vs. NCBI_GenBank
Match: gi|999982493|gb|KXJ21643.1| (Retinol dehydrogenase 7 [Exaiptasia pallida]) HSP 1 Score: 137.117 bits (344), Expect = 3.342e-33 Identity = 72/215 (33.49%), Postives = 127/215 (59.07%), Query Frame = 0 Query: 110 VLITGCDSGFGRGLALALSELGWNVYATCMTTDGVHYFAKN--GKVTALIMDVTKEEDVRAVMAKVDAAHPKE-GLYALVNNAGVDRFGTTDWCDVEHYRWHMEINFFGHVRMVKEALPLLKRAARHNDYHSSRILNITSFSGLLPGLFMKSAYGASKHAAESWSNSLRMELRHFGIQVCQVNPVWHRTEI-AHSQRDHLVRIYESLSGDLQADY 320 VLITGCDSGFG+ A L +G+NV A C+T +G H KN G++T + M+VTK E+++ V +V PK+ GL+A++NNAG+ +W +E +++ ++N +G + + K LPLLK+ R++N++S +GL ++ Y SK+ E++S++LR E++ FG++V + P T + L ++ +L+ +++ +Y Sbjct: 38 VLITGCDSGFGKETATRLETIGFNVIACCLTKEGQHDLLKNSKGRITPVCMNVTKSEEIKQVYEQVKGIIPKDLGLWAIINNAGIMTLAPLEWVSMEEFKYIADVNLWGVIEVTKTFLPLLKKG-------KGRVVNMSSLAGLYCA-SGRAPYCISKYGIEAFSDALRREMKSFGVKVSIIEPPAFNTLLWKDLATKKLTTLWNNLTDEMRCEY 244 The following BLAST results are available for this feature:
BLAST of EWM26631.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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