EWM26610.1, cds4038 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|585108698|gb|EWM26610.1| (mg(2+) transport atpase protein c [Nannochloropsis gaditana]) HSP 1 Score: 806.209 bits (2081), Expect = 0.000e+0 Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0 Query: 1 MGEARRSNHAHSQRACRLQGSRVWLAAGMLLSYAVLSVAFHLSPTRVTVSALVAHPKNSFPPSRRSLVPSMVCAARSRTNVGMVRSRSALFYPRHCRGAVKMHSSALSSLGITELEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDKSRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRMIRLRRRDLASLAERAFSLKPAAPAAKTPIPTGTSSVPASNPSTRQETLMVAGGAGGSLLSSPPPDSPFLVGTRRPNSSTPSASSSFRGKAPSRGASPAKRGGGSSKASLKTNGCEEGDEAPGIHEYAAGVPGPSDLCESTSGAVGLGIQKDKQRRS 408 MGEARRSNHAHSQRACRLQGSRVWLAAGMLLSYAVLSVAFHLSPTRVTVSALVAHPKNSFPPSRRSLVPSMVCAARSRTNVGMVRSRSALFYPRHCRGAVKMHSSALSSLGITELEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDKSRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRMIRLRRRDLASLAERAFSLKPAAPAAKTPIPTGTSSVPASNPSTRQETLMVAGGAGGSLLSSPPPDSPFLVGTRRPNSSTPSASSSFRGKAPSRGASPAKRGGGSSKASLKTNGCEEGDEAPGIHEYAAGVPGPSDLCESTSGAVGLGIQKDKQRRS Sbjct: 1 MGEARRSNHAHSQRACRLQGSRVWLAAGMLLSYAVLSVAFHLSPTRVTVSALVAHPKNSFPPSRRSLVPSMVCAARSRTNVGMVRSRSALFYPRHCRGAVKMHSSALSSLGITELEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDKSRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRMIRLRRRDLASLAERAFSLKPAAPAAKTPIPTGTSSVPASNPSTRQETLMVAGGAGGSLLSSPPPDSPFLVGTRRPNSSTPSASSSFRGKAPSRGASPAKRGGGSSKASLKTNGCEEGDEAPGIHEYAAGVPGPSDLCESTSGAVGLGIQKDKQRRS 408
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|553196642|ref|XP_005856391.1| (mg(2+) transport atpase protein c, partial [Nannochloropsis gaditana CCMP526] >gi|422292676|gb|EKU19978.1| mg(2+) transport atpase protein c, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 532.717 bits (1371), Expect = 0.000e+0 Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0 Query: 1 MGEARRSNHAHSQRACRLQGSRVWLAAGMLLSYAVLSVAFHLSPTRVTVSALVAHPKNSFPPSRRSLVPSMVCAARSRTNVGMVRSRSALFYPRHCRGAVKMHSSALSSLGITELEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDKSRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRMIRLRRRDLASLAERAFSL 270 MGEARRSNHAHSQRACRLQGSRVWLAAGMLLSYAVLSVAFHLSPTRVTVSALVAHPKNSFPPSRRSLVPSMVCAARSRTNVGMVRSRSALFYPRHCRGAVKMHSSALSSLGITE EIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDKSRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRMIRLRRRDLASLAERAFSL Sbjct: 1 MGEARRSNHAHSQRACRLQGSRVWLAAGMLLSYAVLSVAFHLSPTRVTVSALVAHPKNSFPPSRRSLVPSMVCAARSRTNVGMVRSRSALFYPRHCRGAVKMHSSALSSLGITEFEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDKSRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRMIRLRRRDLASLAERAFSL 270
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|299469901|emb|CBN76755.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 130.568 bits (327), Expect = 4.937e-29 Identity = 78/165 (47.27%), Postives = 106/165 (64.24%), Query Frame = 0 Query: 114 ELEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIIS-LGIPG--DKSRMAASVASGVGFIGAGVISQNGFEDSS---------RSG----GRRIQ------QVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRMIRLR 256 EL+I RL++A G IG ERR S RPAG+RTM+LV+LGA FT++S LG G D++R+AASVASGVGFIGAGVI+ +G E SS R G G + +V GLTTA+AIW++A LG++ GAGL + +GA L V +L++ T ++ + Sbjct: 29 ELQIFLRLVVAAMVGMFIGTERRTSHRPAGVRTMSLVALGACTFTLVSQLGFVGKADQARVAASVASGVGFIGAGVITTSGKEASSMRESLNTRGRGGSNFPGTTVSMNDVDGEVKGLTTASAIWITAGLGMACGAGLLFIAMLGAGLTVGILKISEVTTSVQKK 193
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|516357269|ref|WP_017747302.1| (hypothetical protein [Scytonema hofmannii] >gi|1004813512|gb|KYC39476.1| hypothetical protein WA1_32685 [Scytonema hofmannii PCC 7110]) HSP 1 Score: 109.383 bits (272), Expect = 4.771e-25 Identity = 70/143 (48.95%), Postives = 91/143 (63.64%), Query Frame = 0 Query: 115 LEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGI---PGDK--SRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRV-GRFTR 251 L I RL +A F GA IG ER+ S +PAGLRT LVS GAA+F++I L P + SR+ +A+GVGFIGAG I + +S+RS ++ GLT+A AIWVS+ALG+++G GL L IGA L + VL V RF R Sbjct: 13 LNITFRLCLALFVGAIIGIERQLSNKPAGLRTHMLVSFGAALFSLIVLQFNVSPEAEPLSRVIQGIAAGVGFIGAGEILRQSSHESTRS------EIQGLTSAAAIWVSSALGIAAGCGLWQLGLIGALLCLLVLNVFKRFER 149
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|504777573|ref|WP_014964675.1| (MULTISPECIES: magnesium transporter MgtC [Nitrosopumilus] >gi|407047551|gb|AFS82303.1| MgtC/SapB transporter [Candidatus Nitrosopumilus sediminis]) HSP 1 Score: 108.227 bits (269), Expect = 9.392e-25 Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 0 Query: 109 SLGITELEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDKSRMAASVASGVGFIGAG-VISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTR 251 GI + EI+ +LL+A GA IGFER RPAGLRT LVSLGA IFT+ SL + +R+AA + +G+GF+GAG +I+ G V G+T+A +WV A +G+S G G + + + L +L++GRF + Sbjct: 4 EFGIVDFEIVLKLLIAVGLGAMIGFERELKHRPAGLRTHMLVSLGATIFTVSSLSFDVEPARIAAGIVAGIGFLGAGNIIAHKG-------------HVQGITSAATLWVVAGIGLSVGIGEYFIAVVSSVLIFAILQLGRFEK 134
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|1121322887|ref|WP_073632999.1| (hypothetical protein [Scytonema sp. HK-05] >gi|1115294466|gb|OKH57480.1| hypothetical protein NIES2130_19610 [Scytonema sp. HK-05] >gi|1210126726|dbj|BAY45840.1| MgtC/SapB transporter [Scytonema sp. HK-05]) HSP 1 Score: 107.457 bits (267), Expect = 2.469e-24 Identity = 65/140 (46.43%), Postives = 88/140 (62.86%), Query Frame = 0 Query: 115 LEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDK------SRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGR 248 L I RL +A GA IG ER+ +PAGLRT LVS GAA+FT+ISL D+ SR+ +A+GVGF+GAG I + ++S+RS +++GLT+A AIWV AALG+++G G L IGA L+ VL V + Sbjct: 13 LNITFRLCLALLVGAIIGIERQIRHKPAGLRTHMLVSFGAALFTLISLATGTDQPNADAVSRVIQGIAAGVGFLGAGEILRESSQESARS------KIHGLTSAAAIWVCAALGIAAGCGWWQLGLIGALLSFLVLNVFK 146
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|1197739069|ref|WP_086688838.1| (hypothetical protein [Nostoc sp. T09] >gi|1196007254|gb|OUL29375.1| hypothetical protein BV372_23290 [Nostoc sp. T09]) HSP 1 Score: 105.916 bits (263), Expect = 9.097e-24 Identity = 65/138 (47.10%), Postives = 84/138 (60.87%), Query Frame = 0 Query: 115 LEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDK------SRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRV 246 L + RL MA G IG ER+ +PAGLRT LVSLG+A+FT+I L G K SR+ +A+GVGF+GAG I + ++ R +V+GLT+A AIWVSAALG+++G GL L IGA L VL V Sbjct: 7 LNVTFRLCMALLCGGIIGLERQMRHKPAGLRTHMLVSLGSALFTVIPLHTVGLKPGADALSRVIQGIATGVGFLGAGEILRESSQELKRP------EVHGLTSAAAIWVSAALGIAAGCGLWQLALIGALLTFLVLNV 138
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|889975459|ref|WP_048869447.1| (protein SrpB [Scytonema tolypothrichoides] >gi|750922280|gb|KIJ82099.1| protein SrpB [Scytonema tolypothrichoides VB-61278]) HSP 1 Score: 105.916 bits (263), Expect = 9.110e-24 Identity = 63/138 (45.65%), Postives = 86/138 (62.32%), Query Frame = 0 Query: 115 LEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDK------SRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRV 246 L I RL +A GA IG ER+ +PAGLRT LVS GAA+FT++SL I DK SR+ +A+GVGF+G G I + ++S+R+ ++ GLT+A AIWV A LG+++G GL L I A L++ VL V Sbjct: 13 LNITFRLCLALLVGAIIGIERQIRHKPAGLRTHMLVSFGAALFTLVSLIISADKPNGDALSRVIQGIAAGVGFLGGGEILRESSQESART------EIKGLTSAAAIWVCAGLGIAAGCGLWQLGLIAALLSLLVLNV 144
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|1096250418|ref|WP_071188591.1| (hypothetical protein [Trichormus sp. NMC-1]) HSP 1 Score: 105.531 bits (262), Expect = 1.178e-23 Identity = 69/147 (46.94%), Postives = 92/147 (62.59%), Query Frame = 0 Query: 115 LEIITRLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDK------SRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRMIRL 255 L I RL +A G IG ER+ +PAGLRT LVSLG+++FTII++ + G++ SR+ +ASGVGF+GAG I + E S +S I +GLT+A AIWVSAALG++SG GL L IGA V VL + F ++ RL Sbjct: 13 LNICFRLSLALIIGGIIGLERQLRNKPAGLRTHMLVSLGSSVFTIIAIQVGGEQISADALSRVIQGIASGVGFLGAGEILR---ESSQQSNSLAI---HGLTSAAAIWVSAALGIASGCGLWQLGLIGAVFTVVVLHI--FKKVERL 151
BLAST of EWM26610.1 vs. NCBI_GenBank
Match: gi|654619230|ref|WP_028083727.1| (protein SrpB [Dolichospermum circinale]) HSP 1 Score: 105.531 bits (262), Expect = 1.279e-23 Identity = 63/139 (45.32%), Postives = 88/139 (63.31%), Query Frame = 0 Query: 120 RLLMATFAGASIGFERRYSERPAGLRTMALVSLGAAIFTIISLGIPGDK------SRMAASVASGVGFIGAGVISQNGFEDSSRSGGRRIQQVNGLTTATAIWVSAALGVSSGAGLNLLTFIGAALAVCVLRVGRFTRM 252 RL ++ F GA IG ER+ +PAGLRT LVSLG+++FT+I++ G + SR+ +A+GVGF+GAG I + E S +V+GLT+A AIWVSAALG+++G GL L IGA L V +L + F R+ Sbjct: 18 RLFLSLFIGAIIGLERQIKNKPAGLRTHMLVSLGSSVFTLITIQTGGTQLSADAISRVVQGIAAGVGFLGAGEILRQSSETSKSP------EVHGLTSAAAIWVSAALGIAAGCGLWQLGLIGAVLTVIILHI--FKRL 148 The following BLAST results are available for this feature:
BLAST of EWM26610.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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