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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100001g87.8094.mrna |
| Orig protein id | gnl|cribi|Naga_100001g87.8094 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:663724..665898 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4030 ID=rna4030|Name=rna4030|organism=Nannochloropsis gaditana|type=mRNA|length=4264bp
CCCAGGTTTTACTCGAGCGTAGGTTTTCTGTCAAAGGCATGAGAGAGGAA
AGCAGACGAGGACGTCGTGGAAGCCTTGATGTGAGGAGATGGGGGGAGGA
ATTTGACGATGAACGTGGGAGGGACTTTGAAAAACAAGCCAGTCGGGAAA
GCGGCATGCACGTCAATCATGAATCTCCCCAGTCCCATTCTCTTGCCTCT
GGGGATGTGCGGGGCGGTGGAATGCGAGAATGGTCGGATAGCTATCGCGG
TAGGCGGGGAGGCCGTAAGGGCAGTCGCCCGCAGGATAGAGATGACGACT
TGGATGGCCGAGCCGGGGACCAAAAGAGCAGAGGAGGCATTGAGTCGGAG
CACCCTGAGCGGTACAAGCACACTGAGAGGGGTCTGGACAGGGAGGACGC
ACGGGGCAGACGGAGAGCCGGGTATGGCAGTGCAGGACGCGGGCGGGCCG
GTGACTTGGGCGATGCCCCGCGGAGGGGAGAGAGGGAGTTGGACCAGGGC
AGATGGGGCGGTCGGGAGCTCCCGCCGAGCCGACAACAGTATCAAGATGT
GCGTCTTGGACACGCCGAGCGCGGGAGGCAAGGAGGAGGGCGCGGGGAGT
GGAGGAGAAATCTGGGCGACTGTTGGGGGACGGGAGGGCGTTCCGATCGG
CCCATGGATTTTGGAGAGGAGTCAAGCAGCACGTGGTCCGAGTCGCCGTA
TGCGAAGGGTCGAGGCAGAGGCGTGCAAGGCGCACAGGCGTGTCATGGGG
GCAGGCCTGGGAAGGAGGCGGGGCGGGAGGGAGCTCGGACCGGGGACCAG
ACCCCTCTTTCTCGAGGCGAGCCCTTGTCCCTCGACGACGCGGAGGTGGG
TGGGACCTACCAGGGATTTGTGTACGCTTCGCACGAGACGCACGGCTTTT
TCTTTTACTTTGGGCGCCTGGACCCCGGCAGGAAATTTCGCAGCTTCGAG
TGTTCCGGGCGCATCACGCGCTTCGGCCTGCCCAGCCCGTGGATCGCCGA
TATGGAAAGGCGGGTGCTCCGGGCCCGGGAATCGGCTCCAGGCCTAGTTC
GTCCTGAGTGGCTGCTGCCGCTCAGGGTCAAAAGCATGGAGCGCCCGGTG
GGGGGCAAGCCGCGGGTGGAGCTGATCCTCGTCCCCGAGAGGAAGCTCCT
CATCCTGGACCTGAACGGCGTCCTCTTCAACCGGTACTCGGTGCACGACG
AGCGGCGAGGGCTGGGAGAGATCCAGAAGCGACCCAAGTGCGAGGAGTTT
CTGGACTTCTGCTTTGAGCACTTCCACGTGGCATGCTGGAGCTGCTGCAA
CAAGGAGACGATGGAGCTGGGCGTCTTCGGCGCCCGGGAGAAAGACCTCC
TCTTCTCGAACTACAGTGCCCACAGCATTAATCTCTGGCCGCGCCACTCC
GCAGTCTCCGTCGACAAGCCCCTCTTTCTCAAGGACCTCTCCCGGCTCTG
GAAGCAGCAGCTGGACCGGGTGGCCTTCGACGCGAGCAGCACGATCCTGG
TGGACAACCACTTGGAGAAGTTCGAGCGCAACCCTTTGGGAACCTGCGTC
CTGGTGCCAGAGTACAGCGATGCCGCCCAGCCCCCGGACGACCTCCTCTC
CTTGGAGGGAGAGCTCGTTGCTCATCTTCGCGCCATGGCCCACACCCCCG
ACAGCGGAGCCTATGTCCGGGGAACCGCCTCGGCCTTTTTCCCTACCGCC
CACCCGATCCCTCCCTATGATCTGTCGCGGCTGAAGGCGGTCGTGCTGCA
GGCGTTCTGTGCCTCCGAGTGCATGCGTCGGGAGAGACCAGACTTGACGG
TCGGGCACTACATGGAAAGGAAGGAGACGCCGGGCCCGAGAGCGATCCAG
TTGCGTCGGAAGAGCCTGGTGGAGGTGGCGGGGCCACGCGCCCCCCCTCA
CGTCGTGTGCGAGAAGTCTGACGGCACGCGCCTCTTCCTGCTCGTGCCGG
AGGAAAAGATTCGAGAGGAGATCGAGGAAGCGGGTGGAGGGCGAGTGGGG
GGGTTCTTGCTCGACCGACAGTGGAAGGTGGAGCGCTTGGCGGAGGATGG
AGGGGACTGGGGTCTGTCGTCGGTCCTGAGCCCGCGAGGAGAGACCTCTC
TCTTGGATGGAGAGCTCGTGCGGCCCTTGCCTGCCCCAGGGCGCGACACA
GGAGAGGAAGAAGGTCGGAACGGGGGGGCGACAGGGGACGCATTCCTGTT
TCTGGTGTTTGACGTGGTGTTCTTGGATGGGAGGGACGTGGGCGCCATCC
CGTCCTTGGGCGCGCGCATGCAGGCGCTGAAAGACGTCATTGGCTCTAGT
CCGACACCATCGCGTGGCCCGCTCTCGGTCAAATTCGGCCTCAGCCGCCC
CGGATGCACGCTGACGATCCTCCCCAAGGAGTTCTATGCTTTGGACCATC
TTTCTGGCATGTTGAACACGATGATGCGGCCCTGCGGGGGTAAGAGCGAC
GAGAGCACGCAGGAGGCTGTCGAAGTGGTGGAGGAGAGAGAGGCTCAGGC
CAGAATGGACCAGTTTATTTTTGACGACGGGCAGCGTCGTTCCATCTCAG
ATGGCTTGGTCTTCACGCCTTCCTGTGTGCCTTACTATCTTTATCAAGTC
CATAAATTCAAGACACCTGGCCGCATTAGTATTGACTTCAAGGTGAAAAA
GACCGACTTGGACGACGCCTCGTCCGCCGGGAACGGGCTTTGGGAAATCC
CGCTCTACTTGACGCTCATGAAGTTCGACACCAAATTTACAGCGCTCGAC
TTGCGGCGGGAGGACGCCTACCACCGTCTGGTGGATCACTTTAAAGTTGT
GGAGGGGGCTCTGTCCCTGTCGGGGACAGATGAGAAGCCCAGCGAGTGCG
TGGTGGAGTGCGACTTTGCGCGGGGGGCAGGGGGCGGGGCAGGCTCTTGG
GTGTTGCGGCTGATTCGAGGCGATAAAGCTAGGCCAAATTCCGTCCAGAC
GGCCTGGAACAACTTGGAGGCCCTGGCGGAGGGCTTGGCCCTTGAGGAGC
TGGTGGAGGCGCTGGAGAGGCTGCGGCTTGAAACGTCGTGTCTGGAAAAG
GGAGAGAAGCCTACTGTGGACGAGGTGGCTGATCATTATGATGTGCTGCA
GAAAAGGCGGTGGGAAGCGGGAGAAGGGGCCTTGGACCCGCGCATCCACA
ACTTACGGCGGCTCAATAACTGGATCAAGGCTGTCCTGATAGAGATGTGC
GGGGGGTTGCGGCGGGGGCTTGCGAATGACGAGAAGCCTGTGACAGAGGA
GGACCAGCATCTGGGCGCCATGAGCAACCCGTTGGCTACCGTGGAGGACC
GAAACGCCGCAGCTCTCAGCGGAGGCAGTGAAAAGGACGGTGGCCGAAGG
AGAGGGTGCCGGGGCGGGCTGCGGGCAGTGATCGACATGGCCTGTGGGCG
AGGCGGGGACCTGGGAAAGTGGGTGATGCAAGGCGCCGACATCTACGTGG
GCTTTGACAGCTCGGAGCAGAGCGTGATAGAGTGCCGTAGCCGAGTCGAG
GAGAGCCAGCGACGGAGGGGGAGGCCCAGGTGTTCCTGTGTCTTTCGACA
CAGCATGCTCAGCGGGACCGTGGCCGACGCCGTGATTGACCGGCTTGGCG
GAAAAGGTCTGGACGAGGAGCTGGAGCGTAATGGAAGGGGCTTTGACGCT
GTATCCATCCAATTCGCCCTCCATTACGCGTGCGCCTCCGAGACGTGCCT
CTCTGGACTGCTTCGGGACGTAGGTCGCCTCCTGAGGGATGACGGCTTGC
TCATCCTCACGTGCGTGGATGACCGTACCCTCGGTCAACACCTCGCTCTC
CACCCATCAGGGACGTTCGGGAATGCCGTCTACCGGGTAGAATTCTCCCC
GGATTCTCTCAGCAATGCCAGGGGAGACGGGGAACCGCTGCTCCATCGCC
TCGGCCAACGCTACACTTTCTCCCTCTCCTCCGCCGTAGAGGCCTGCGCC
GAGTACGTGGTTCCCGCCTTGGAGCTGGCAGAAATCGCTGCGAAGGTTGC
AAACCTGAAGCTGGTCTATCGCCGCAACTTTGGGAGCTTTGTCTACGAGC
ACTTGTCCGAGTACGGGCACCTGCTGGAGGCTCTGAGGGTGGGAGTGGTG
ACTGAGGAGGAGTGGGAGGCCATTCAGCTTTACTCCGTCATGGTATTTAG
GATGGAGCGCTCGTAAGTAACGAAATTGAGACGTGAATGCGAATACTGTC
ATGTTTCAGAAAAGAACAGAGGAAACACAGGATCGGGGGTTGATCCCGCC
CAAATGCGTCACGA back to topprotein sequence of rna4030 >rna4030-protein ID=rna4030-protein|Name=rna4030|organism=Nannochloropsis gaditana|type=polypeptide|length=366bp
MSCEAPDSRPLGVGFQEKRKVMSPVLVSGDTVYFAILTEPCLQTQVCSAD
SKHRGVNETLARLRGLQGQIRQRENMEREGVREDDGGKTNAMSLQGGGKE
KVKAPVVTEDGGSVGIGNNSIEVIDLCGKLGLGSESDPAASPSSLLDSLI
QNCSRLKVPSLDTSVPSPDQQAKLVVSRFMAGGAARREVVLTTFAQDGRP
SLLAASRTHLALADPWRSILHVYFLPDSFARVATTEKRMLELPVGFLPRG
LVLAASGGLYCLATQIKRGKGSEEGSATSWKLLHFPLQEPGASPEAGLPT
CPPPGGPSCGPRAAWPKAPSSITGDVQLREKADIVALVQGLERRMNARFD
ALEARLDGLARHLGAL back to topmRNA from alignment at CM002462.1:663724..665898+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4030 ID=rna4030|Name=rna4030|organism=Nannochloropsis gaditana|type=mRNA|length=2175bp|location=Sequence derived from alignment at CM002462.1:663724..665898+ (Nannochloropsis gaditana)
ACGTCCTCGtctgctttcctctctcatgCCTTTGACAGAAAACCTACGCT
CGAGTAAAACCTGGGAGCTATTTTGGGTATGAAATGCGCATTTTTTTGTT
AAGGGCGTGATTAGGAGTGCTTAAACGGAAACGCATTGAAGGCAGCGATT
GAAGACACGCGTCGATCAAGGCCGGAAGACTGATGCCCATGAATTTCCGA
ATTTTGGCTTCATTACCATCCATATATCAAACACTTAAAGCCGCTACCAC
ATGCGGGAAGTAGAGATCGGTGCATGCGACGCTCTTTCCCCGACCCAGGA
TTACTTGCAAGGTGAGAGCACATTAACCTCCCCGAGAGCCATACTTCCGC
GCCCGGGCTTTCCCCACTCTATCCTCCGTACTCAACCATACGAGCACATC
AGGggcctccttccttgacGGGAAATGCATTATTGTTCTACCTCTCGACG
GCAAGGCGGTGCTTGTGAGTATACCCTTGGTGCAAAGGAATCTAAGCGCA
AGCACGCAGACAGTGGGCACGTACGGTGCAAAAAACGGAACTCTGCATCT
AGCATCTGTATCACCTTGCGCAACAAGGCTGGCACTAAATTTTGCATGCG
GCATTCTAGAGGTTTATGAGGTCGTTATGAACGCGGAGGGCCGTAATGTG
GAGGCTGTGACCTTTCTTGCGTCGACTCGAGCAGAGAGGTGAGTCTCCGG
TTGttgaggtcgaggagggtcTAGTCTTTCGTGAGTCACGAGTCTCCGTA
CTATATTATCCCAAGCAAGAAGATACGAAAGCTGAGTTGGCAGTGCACTT
CAAAGGCAGCTTATCTAGGCGTGTCAGATGTCCGACGATTGCGCGTCTAT
GACTGCAGAGCTGGAGGTACGGGTGGTCTGGCGCTCGTCCACGAGACGAT
ACTTTCAGAGCCCATAAACGACTGGTCATGGCTGGACTCCCAACGAATCG
CTTTATTGTTGGATAATGGTGTGCAGCTGTGCGGTTTGAGGCCGAATGCT
CGGCCGGTTGGCGTCATGTCATGCGAGGCACCAGACTCTCGGCCCTTGGG
TGTGGGATTTCAGGAGAAACGAAAGGTCATGTCCCCTGTGCTAGTCAGCG
GCGATACAGTTTACTTTGCCATCCTTACGGAGCCATGTTTGCAGACGCAA
GTATGTTCTGCCGATAGCAAGCATCGCGGGGTGAACGAGACCCTGGCGAG
GTTACGCGGCCTCCAAGGGCAGATCCGGCAGAGAGAGAacatggagaggg
aaggcgtcCGGGAGGATGATGGGGGCAAAACTAACGCTATGTCAttgcag
ggaggagggaaggagaaggtgaaggcACCAGTTGTgacagaggacggggg
gagcgTCGGTATCGGTAACAATAGCATCGAGGTTATCGATTTGTGCGGGA
AGCTCGGTCTCGGCTCTGAGAGCGATCCTGCCgcgtcgccttcttctctg
ctCGACAGCCTGATCCAAAATTGCTCACGTCTTAAAGTCCCCAGCCTCGA
CACGTCAGTTCCGTCCCCTGATCAACAGGCCAAGCTAGTGGTCTCAAGGT
TTATGGCCGGAGGCGCTGCAAGGCGGGAGGTCGTCCTGACCACGTTCGCC
CAGGACGGAAGGCCCTCGCTGCTCGCTGCTTCTCGGACACACCTTGCCCT
CGCCGACCCATGGCGCTCCATCCTGCACGTCTATTTTCTCCCCGATAGTT
TCGCCCGCGTCGCCACGACAGAGAAGCGCATGCTTGAGCTTCCTGTCGGC
TTTCTCCCCCGCGGTCTCGTCCTGGCGGCGTCCGGGGGGCTCTACTGTCT
GGCCACTCAAATTaagcgaggaaagggcagcgaggagggctCGGCCACCT
CCTGGAAGCTActccacttccctctccaAGAGCCTGGAGCCAGTCCGGAG
GCTGGGCTGCCGACGTGCCCGCCCCCAGGGGGCCCTTCATGTGGACCGAG
GGCGGCCTGGCCAAAAGCTCCCTCCTCAATAACGGGCGACGTTCAGCTCC
GAGAGAAGGCGGACATAGTGGCACTGGTCCAGGGCCTTGAGCGGAGGATG
AACGCACGCTTTGACGCGCTGGAAGCCCGCCTGGACGGGCTCGCACGGCA
TCTCGGCGCTCTGTGAACGAGGACACGTCTGCCAAATAAAGCACGCACAA
GAAAACAATGTAAAGGAAGTCGTCA back to topCoding sequence (CDS) from alignment at CM002462.1:663724..665898+ >rna4030 ID=rna4030|Name=rna4030|organism=Nannochloropsis gaditana|type=CDS|length=1101bp|location=Sequence derived from alignment at CM002462.1:663724..665898+ (Nannochloropsis gaditana)
ATGTCATGCGAGGCACCAGACTCTCGGCCCTTGGGTGTGGGATTTCAGGA
GAAACGAAAGGTCATGTCCCCTGTGCTAGTCAGCGGCGATACAGTTTACT
TTGCCATCCTTACGGAGCCATGTTTGCAGACGCAAGTATGTTCTGCCGAT
AGCAAGCATCGCGGGGTGAACGAGACCCTGGCGAGGTTACGCGGCCTCCA
AGGGCAGATCCGGCAGAGAGAGAacatggagagggaaggcgtcCGGGAGG
ATGATGGGGGCAAAACTAACGCTATGTCAttgcagggaggagggaaggag
aaggtgaaggcACCAGTTGTgacagaggacggggggagcgTCGGTATCGG
TAACAATAGCATCGAGGTTATCGATTTGTGCGGGAAGCTCGGTCTCGGCT
CTGAGAGCGATCCTGCCgcgtcgccttcttctctgctCGACAGCCTGATC
CAAAATTGCTCACGTCTTAAAGTCCCCAGCCTCGACACGTCAGTTCCGTC
CCCTGATCAACAGGCCAAGCTAGTGGTCTCAAGGTTTATGGCCGGAGGCG
CTGCAAGGCGGGAGGTCGTCCTGACCACGTTCGCCCAGGACGGAAGGCCC
TCGCTGCTCGCTGCTTCTCGGACACACCTTGCCCTCGCCGACCCATGGCG
CTCCATCCTGCACGTCTATTTTCTCCCCGATAGTTTCGCCCGCGTCGCCA
CGACAGAGAAGCGCATGCTTGAGCTTCCTGTCGGCTTTCTCCCCCGCGGT
CTCGTCCTGGCGGCGTCCGGGGGGCTCTACTGTCTGGCCACTCAAATTaa
gcgaggaaagggcagcgaggagggctCGGCCACCTCCTGGAAGCTActcc
acttccctctccaAGAGCCTGGAGCCAGTCCGGAGGCTGGGCTGCCGACG
TGCCCGCCCCCAGGGGGCCCTTCATGTGGACCGAGGGCGGCCTGGCCAAA
AGCTCCCTCCTCAATAACGGGCGACGTTCAGCTCCGAGAGAAGGCGGACA
TAGTGGCACTGGTCCAGGGCCTTGAGCGGAGGATGAACGCACGCTTTGAC
GCGCTGGAAGCCCGCCTGGACGGGCTCGCACGGCATCTCGGCGCTCTGTG
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