EWM26740.1, cds3995 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|585108828|gb|EWM26740.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 800.816 bits (2067), Expect = 0.000e+0 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0 Query: 1 MLFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRGTSKKSSLSTETVSFTSTSESSVLEQKRQKNEPAAHLPGPVQHTTVRPFAPVTRAAPSGCPPTAPAGFVPWMVGPYACVPPTYYNMQMMAHGYDFGAPLVSPSSQYRASFPNPLSAPGGNCQEQDLGLNAPQSVRMPLEAEMAAQIHYLGIDDEETIAQNQPNSYKRLRVPAGLAMATPAAVPTAQSSHCKVYVAPQQSCTSPSDMTPTLTASALHLPPQGSLCPFMTSNPLDELMQSLSQENLSSSCSSTSPSIAPEVDVPSMHDILIWDLNGKHSRPSSLSSWDEEGFDGVSTSSSPASIDNHVVCQPPDLSELQYAKAA 387 MLFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRGTSKKSSLSTETVSFTSTSESSVLEQKRQKNEPAAHLPGPVQHTTVRPFAPVTRAAPSGCPPTAPAGFVPWMVGPYACVPPTYYNMQMMAHGYDFGAPLVSPSSQYRASFPNPLSAPGGNCQEQDLGLNAPQSVRMPLEAEMAAQIHYLGIDDEETIAQNQPNSYKRLRVPAGLAMATPAAVPTAQSSHCKVYVAPQQSCTSPSDMTPTLTASALHLPPQGSLCPFMTSNPLDELMQSLSQENLSSSCSSTSPSIAPEVDVPSMHDILIWDLNGKHSRPSSLSSWDEEGFDGVSTSSSPASIDNHVVCQPPDLSELQYAKAA Sbjct: 1 MLFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRGTSKKSSLSTETVSFTSTSESSVLEQKRQKNEPAAHLPGPVQHTTVRPFAPVTRAAPSGCPPTAPAGFVPWMVGPYACVPPTYYNMQMMAHGYDFGAPLVSPSSQYRASFPNPLSAPGGNCQEQDLGLNAPQSVRMPLEAEMAAQIHYLGIDDEETIAQNQPNSYKRLRVPAGLAMATPAAVPTAQSSHCKVYVAPQQSCTSPSDMTPTLTASALHLPPQGSLCPFMTSNPLDELMQSLSQENLSSSCSSTSPSIAPEVDVPSMHDILIWDLNGKHSRPSSLSSWDEEGFDGVSTSSSPASIDNHVVCQPPDLSELQYAKAA 387
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|585111934|gb|EWM29405.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 101.293 bits (251), Expect = 1.271e-19 Identity = 53/116 (45.69%), Postives = 77/116 (66.38%), Query Frame = 0 Query: 1 MLFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNT-----ERRGTSKKSSLSTETVSFTSTSESSVLE-----QKRQKNEPAAHLPGPV 106 +LFL+GL+++GKSWKKIS+IV TRTVVQIRTHAQKYLIK+EKA+K G G +MM+GK + ++ G +++ VSF S+ + + + ++R K+ P A GP+ Sbjct: 168 LLFLKGLEIYGKSWKKISQIVKTRTVVQIRTHAQKYLIKIEKAKKLGLTGTVMMNGKAITSSTKGKGGAGGQKGLKAVTLPQVSFPSSVHTGIAKTHGSHKQRSKDHPVAPFSGPL 283
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|1210516787|dbj|GAX24276.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 89.3521 bits (220), Expect = 9.168e-16 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0 Query: 2 LFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRGTSKKSSLSTETVSFTSTSESSVLEQKRQ 94 LFL+GL+ HGK WKKI+ ++ +RTVVQIRTHAQKY KL KAR+ G +G + M+G+G G + +S +T T + T+ + KR+ Sbjct: 108 LFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRG-------GNASITSNTTATAAMTNKRRRHITGTKRK 193
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|1210512502|dbj|GAX28359.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 88.5817 bits (218), Expect = 1.469e-15 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0 Query: 2 LFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRGTSKKSSLSTETVSFTSTSESSVLEQKRQ 94 LFL+GL+ HGK WKKI+ ++ +RTVVQIRTHAQKY KL KAR+ G +G + M+G+G G + +S +T T + T+ + KR+ Sbjct: 109 LFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEGRG-------GNASITSNTTATAAMTNKRRRHITGTKRK 194
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|298714408|emb|CBJ27465.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.8113 bits (216), Expect = 2.180e-15 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 0 Query: 2 LFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKG 58 LFLRGL+LHGK WKKI+ ++ TRTVVQIRTHAQKY K+ KA++ G G + MD KG Sbjct: 16 LFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKG 72
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|585113115|gb|EWM30452.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 87.8113 bits (216), Expect = 3.345e-15 Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = 0 Query: 1 MLFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQG-VLMMDGKGVDNTERRGTSKKSSL 73 +LFL+GL++HGK WKKI++++ TRTVVQIRTHAQKY KL KA+K GH G +L M+G + T K+ L Sbjct: 109 VLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGL 182
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|219128113|ref|XP_002184266.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404497|gb|EEC44444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 86.6557 bits (213), Expect = 7.311e-15 Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0 Query: 2 LFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRGTSKKSSLSTETVSFTSTSESSVLEQKRQK 95 LFL+GL+ HGK WKKI+ ++ +RTVVQIRTHAQKY KL KAR+ G +G + M+G+G S TS S ++VL ++R++ Sbjct: 127 LFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRG-----------------GVASITSVSTTAVLPKRRRQ 203
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|219128116|ref|XP_002184267.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404498|gb|EEC44445.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 84.3445 bits (207), Expect = 6.546e-14 Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 0 Query: 2 LFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRGTSKKSSLSTETVSFTSTSESSVLEQKRQK 95 LFL+GL+ HGK WKKI+ ++ +RTVVQIRTHAQKY KL KAR+ G +G + M+G+G S TS S ++VL ++R++ Sbjct: 127 LFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRG-----------------GVASITSVSTTAVLPKRRRQ 203
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|1072235817|gb|OEU20545.1| (hypothetical protein FRACYDRAFT_165241, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 72.0182 bits (175), Expect = 1.442e-12 Identity = 31/46 (67.39%), Postives = 39/46 (84.78%), Query Frame = 0 Query: 2 LFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAG 47 LFL+GL+LHGK WKKI+ ++ +RTVVQIRTHAQKY KL KA++ G Sbjct: 9 LFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAKQNG 54
BLAST of EWM26740.1 vs. NCBI_GenBank
Match: gi|224007633|ref|XP_002292776.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971638|gb|EED89972.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 78.1814 bits (191), Expect = 5.722e-12 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0 Query: 2 LFLRGLQLHGKSWKKISEIVTTRTVVQIRTHAQKYLIKLEKARKAGHQGVLMMDGKGVDNTERRG 66 LFL+GL+ HGK WKKI+ ++ +RTVVQIRTHAQKY KL KAR G+ M+ G +++ G Sbjct: 428 LFLQGLEQHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKARAGDGSGIPMIGGGAGEDSPELG 492 The following BLAST results are available for this feature:
BLAST of EWM26740.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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