EWM26645.1, cds3986 (CDS) Nannochloropsis gaditana

Overview
NameEWM26645.1
Unique Namecds3986
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:588694..588879 +
Alignment locationCM002462.1:588954..589011 +
Alignment locationCM002462.1:589161..589361 +
Alignment locationCM002462.1:589481..589625 +
Alignment locationCM002462.1:589706..589838 +
Alignment locationCM002462.1:590028..590111 +
Alignment locationCM002462.1:590300..590644 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26645.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g123.8156.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:588694..588879 +
CM002462.1supercontigCM002462.1:588954..589011 +
CM002462.1supercontigCM002462.1:589161..589361 +
CM002462.1supercontigCM002462.1:589481..589625 +
CM002462.1supercontigCM002462.1:589706..589838 +
CM002462.1supercontigCM002462.1:590028..590111 +
CM002462.1supercontigCM002462.1:590300..590644 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM26645.1 vs. NCBI_GenBank
Match: gi|585108733|gb|EWM26645.1| (hypothetical protein Naga_100001g123 [Nannochloropsis gaditana])

HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0 
Query:    1 MNHISEKDERRALIYSGNADTASGRGRYGGVSTEDNGNPPDLASTFYHQSSIFHTMRKGSIVGHHRNLTEIMRGTRRHRLYLAFFLFATSAFVLVAMLSRGGWTLGRIITTSVMMPRVVTCPPALAEWEPNAECKASKIVIFSTRINYGLFGDLKYLTSSETSVHTQAEAAGGESRGLKTREKAIVSSNIQSSYDTWAANFPEYMDYIHTTESCLVVSFLSTALCLILLGVISLGLPASGQAKLDTLSAGFYALALSALCLFVGMLAWMGVPLSAFTTECHPSALPGVNGTGLNWADTSSDFYGGAMCVQLDGGLCSENCSTTSSVNRGGGMYGIAVFSCLLQCVCLVFWAKLQEELSSADDQSRGGRTSFGTITSEVTPVLS 383
            MNHISEKDERRALIYSGNADTASGRGRYGGVSTEDNGNPPDLASTFYHQSSIFHTMRKGSIVGHHRNLTEIMRGTRRHRLYLAFFLFATSAFVLVAMLSRGGWTLGRIITTSVMMPRVVTCPPALAEWEPNAECKASKIVIFSTRINYGLFGDLKYLTSSETSVHTQAEAAGGESRGLKTREKAIVSSNIQSSYDTWAANFPEYMDYIHTTESCLVVSFLSTALCLILLGVISLGLPASGQAKLDTLSAGFYALALSALCLFVGMLAWMGVPLSAFTTECHPSALPGVNGTGLNWADTSSDFYGGAMCVQLDGGLCSENCSTTSSVNRGGGMYGIAVFSCLLQCVCLVFWAKLQEELSSADDQSRGGRTSFGTITSEVTPVLS
Sbjct:    1 MNHISEKDERRALIYSGNADTASGRGRYGGVSTEDNGNPPDLASTFYHQSSIFHTMRKGSIVGHHRNLTEIMRGTRRHRLYLAFFLFATSAFVLVAMLSRGGWTLGRIITTSVMMPRVVTCPPALAEWEPNAECKASKIVIFSTRINYGLFGDLKYLTSSETSVHTQAEAAGGESRGLKTREKAIVSSNIQSSYDTWAANFPEYMDYIHTTESCLVVSFLSTALCLILLGVISLGLPASGQAKLDTLSAGFYALALSALCLFVGMLAWMGVPLSAFTTECHPSALPGVNGTGLNWADTSSDFYGGAMCVQLDGGLCSENCSTTSSVNRGGGMYGIAVFSCLLQCVCLVFWAKLQEELSSADDQSRGGRTSFGTITSEVTPVLS 383
The following BLAST results are available for this feature:
BLAST of EWM26645.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108733|gb|EWM26645.1|0.000e+0100.00hypothetical protein Naga_100001g123 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3996rna3996Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications