EWM26617.1, cds3950 (CDS) Nannochloropsis gaditana

Overview
NameEWM26617.1
Unique Namecds3950
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:512158..512160 +
Alignment locationCM002462.1:512250..512375 +
Alignment locationCM002462.1:512626..513399 +
Alignment locationCM002462.1:513642..514007 +
Alignment locationCM002462.1:514213..514683 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26617.1
ProductLow temperature viability protein
Orig transcript idgnl|cribi|Naga_100001g160.8128.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:512158..512160 +
CM002462.1supercontigCM002462.1:512250..512375 +
CM002462.1supercontigCM002462.1:512626..513399 +
CM002462.1supercontigCM002462.1:513642..514007 +
CM002462.1supercontigCM002462.1:514213..514683 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: INTERPRO
TermDefinition
IPR007307LTV
Homology
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|585108705|gb|EWM26617.1| (Low temperature viability protein [Nannochloropsis gaditana])

HSP 1 Score: 1174.46 bits (3037), Expect = 0.000e+0
Identity = 579/579 (100.00%), Postives = 579/579 (100.00%), Query Frame = 0
Query:    1 MGKARKRFIDPANSQHFYVVHRSQRDANGDDPKASQYVLLPGRRGNAADRGEATEPSQREKDIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAPARGWGHGELESMQRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLTEYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSSTLVMEEDEIHEGAEEILETGADDIEDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAPKKAISNANTGSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVNRSVFQFS 579
            MGKARKRFIDPANSQHFYVVHRSQRDANGDDPKASQYVLLPGRRGNAADRGEATEPSQREKDIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAPARGWGHGELESMQRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLTEYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSSTLVMEEDEIHEGAEEILETGADDIEDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAPKKAISNANTGSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVNRSVFQFS
Sbjct:    1 MGKARKRFIDPANSQHFYVVHRSQRDANGDDPKASQYVLLPGRRGNAADRGEATEPSQREKDIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAPARGWGHGELESMQRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLTEYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSSTLVMEEDEIHEGAEEILETGADDIEDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAPKKAISNANTGSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVNRSVFQFS 579          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|673050767|ref|XP_008879344.1| (hypothetical protein H310_13572 [Aphanomyces invadans] >gi|574465005|gb|ETV92047.1| hypothetical protein H310_13572 [Aphanomyces invadans])

HSP 1 Score: 161.77 bits (408), Expect = 1.060e-39
Identity = 161/572 (28.15%), Postives = 250/572 (43.71%), Query Frame = 0
Query:    1 MGKARKRFIDPANSQHFYVVHRSQRDANGDDPKASQYVL-----LPGRRG-----------NAADRGEATEPS---QREKDIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQGSGLQDERIA-GDEGVAPCRE-ERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAPARGWGHGELESMQRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLT-EYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGK-----RDGHSELEVGRKGRPGSSGSSTLVMEEDEIHEGAEEILETGADDIEDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAPKKAISNANTGSKRDKDEKVLDKRARKAAVKLARREGRAR 545
            MGK  K FI+   +QHF+VVHRSQRD   +DP+AS++VL     LP  R                  +   PS    R  ++  RD +NELG+ NDGY+Y +H+K MG G F +A          GG Y   +G+GL ++R+   DE +A   E +R+   +DAITL+ D MDE+L  AL   +               EL DDF+LQA +E  +           +   D FD++AH+A L+A +E   G    RG                H+                 +               E   + G  K    R+  ++ FE L+  EY +E +G LE  E         G +  E D ++ I+D+++  +    A +G+     R G+   E+  +     + S  +VM+  +     E+       D+ D ++ + YL  R     WDCETI+ST SNLDNHP++I E      +K   +  +E                 +  + LS K+G+PL ++PL     I    +    D      D+  R+ A++L+R +G+ +
Sbjct:    1 MGKKSKSFINKKEAQHFHVVHRSQRDPLINDPEASKFVLLSSKPLPSGRNELDAYDSDDSDLPDLVPQVAAPSGKTVRFGNVVARDLVNELGMVNDGYDYSKHMKEMGQGHFYSA----------GGTYD--EGAGLLNKRVVLPDEVMASANEHDRM---LDAITLTEDVMDEDLREALVNDE------------AFEELTDDFMLQAAQELPD------DADGADVAADGFDYDAHIAKLMAAAE---GIPKYRG----------------HIS--------------DDEDDDEDDDEEGCEYTDEEHEDDGQDKDDAQRA-LDDAFEKLMAEEYDDEQVGELEEDETR-------GKLVLEGDLLDQIVDDYVNIRQELMADEGRLGNPLRSGNRLKEILAECAVELADSDDVVMKPTDPVPAVEQ-----PADLSD-LSSNPYLVQRID-DQWDCETIVSTYSNLDNHPTVIREPSKAPKKKTKAQKIAE-----------------SSTIVLSSKTGMPLNIVPLGATAIIPEEVSDDGSD------DESTRRKALQLSRSKGKTK 468          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|1173960527|gb|OQS06644.1| (hypothetical protein THRCLA_01317 [Thraustotheca clavata])

HSP 1 Score: 160.229 bits (404), Expect = 2.156e-38
Identity = 169/603 (28.03%), Postives = 270/603 (44.78%), Query Frame = 0
Query:    5 RKRFIDPANSQHFYVVHRSQRDANGDDPKASQYVLLPGRR-------------GNAADRGEATEPSQ-REKDIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAPARGWGH----GELESMQRVTPSRHLGFR-DSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLTEYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSSTL--VMEEDEIHEGAEEILETGADDIEDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAPK-----KAISNANTGSK---RDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVNRSVFQF 578
            +K FI+   +QHF+VVHRSQRD   +DP AS+YVLL   +              +  D  E+  P Q +  ++  +D +NELG+ NDGY+Y +H+K +G G F +A G               +G+ L  +R+   + V        + +++AIT++ D MDE+L  AL        EE  E      ELNDDF++QA +E ++D            G D FD++AH+A L+A ++    +A     GH     E         S   GF  +S D                    DA R+ + + E  +          EEE++D        D+ G E  EEE       G +  E D +  I+++F+  +      +G+        +G   R G+        +  E+  +E  EE++E    +++D    + YL  R     WDCETI+ST SNLDNHP+L+ E R ++ +K +  H                       + LS K+G+PL + P++ +      A+ N  + +    R++ E   +K+ RK   K  + E R  KKE    FK+ EK+  L ++ G  A + S F++
Sbjct:  156 KKAFINKKEAQHFHVVHRSQRDPLINDPTASKYVLLSTTKEIDGTQPIYESDDDDLPDLVESNAPKQVKFGNVVAKDLVNELGMVNDGYDYSKHMKEIGRGHFYSAGG------------NFDEGASLLSKRVVLPDEVLASHTSEAERMLEAITITEDVMDEDLREAL------TNEEAFE------ELNDDFVIQAAEENEDD----------KNGNDGFDYDAHIAKLMAAADGIPKYA-----GHFSEDEEEFDEDDEEFSDEDGFYGESKD--------------------DAQRVLDEAFEKML----------EEEYDD--------DMVG-ELDEEETR-----GKLVLEGDLLNSIVEDFVHIQQEVMDSEGR--------IGNPLRTGNHLKEVFAEIEAENAQYESEEEMVEMA--NMDDVAELNPYLAPRVD-DQWDCETIVSTYSNLDNHPTLLREPREKKSKKKNPNH-----------------------IILSSKTGMPLNITPISEEVESQDDAVINVGSVAPQLIRNRRETKEEKKERKMLAKNHKNERRTEKKETKMVFKD-EKIRQL-NQHGPRAGSVSFFKY 639          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|1210521196|dbj|GAX19944.1| (protein LTV1 [Fistulifera solaris])

HSP 1 Score: 156.377 bits (394), Expect = 1.308e-37
Identity = 183/625 (29.28%), Postives = 272/625 (43.52%), Query Frame = 0
Query:    1 MGKARKRFIDPANSQHFYVVHRSQRDANGD------DPKASQYVLLPGRRGNAADRGEATEPSQREKDI--RWRDHINELGLPNDGYNYGRHLKTMGG-GRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAPA----RGWGHGELESMQRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLTEYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSSTL--------------VMEEDEIHEGAEEILETGADDI----------EDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAP-----KKAISNANTGSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVN----RSVFQFS 579
            MGK  K F+D   S  ++++HRSQRD   D      D  A+  VL P    N A   EA   S+R+  I   WR  + + GL  +  +  R LK + G G F+  +G I  AR       L +    +D+ I             ++   ++I L+ADCMDE++ +ALFG   E+  E         ELNDDF+L A +EP      EDGE       D FD++ H+  L+AK++      PA      WG  + +    + P       ++DDE + + +   K MG A                    S +      E+FE  L EY  +D+G  +  +EE    GG   + E + + E  LD FL  K       GKR    E   G K R GS  S+ L                E+DE      ++L    + +          E  I    Y  +R+   PWDCE++LST SNL N+P  I   + R+ +K +    S            L  +   + + LS+K+GLPLGVLP  P      + I++ N G  R+K E   +K+ RK A+K  R+  R +KK   + FKE       Q R+ +  V+    ++VF++S
Sbjct:    1 MGKT-KPFVDKKKSSTYHLLHRSQRDVASDILLQEGDLAAAGMVLWPSE-NNLATTNEAVLSSERDSSIMSTWRKRLEDAGLLEE--DPERFLKPITGTGTFLNTAGRIGDARAPNDARALLK----EDDTIL-----------EVERQFNSIPLTADCMDEDIAQALFGDFDENEFE---------ELNDDFVLDAAQEP------EDGET-----HDVFDYDEHINRLMAKAKLERRGDPAIPGTHAWGKQDNQFFSGMKP-----LHENDDEDSWD-NEFGKNMGVAPS-----------------LSPEEEKVLCEQFEATLLEYDSDDLG--DCPDEEI---GGTRPL-EGDAQFEATLDEFLNEKEDQVFMIGKR----EYLGGIKERGGSGFSALLGGRMVHAKYLNDLNPAEDDEPPTNVNQLLMEAQETLNRPPQQPPAEEILIDGKSYFSERER-NPWDCESVLSTYSNLANNPVTIG-PKVRRKKKSNTSVAS------------LQEDEPVQHILLSQKTGLPLGVLPSRPVIDKFDETINSVNRGEARNKKESNEEKKTRKQAIKRERQMARIQKKATAEVFKE-----EFQKRAVDYGVDDVAGKTVFRYS 534          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|1210512355|dbj|GAX28624.1| (protein LTV1 [Fistulifera solaris])

HSP 1 Score: 155.221 bits (391), Expect = 3.549e-37
Identity = 181/626 (28.91%), Postives = 272/626 (43.45%), Query Frame = 0
Query:    1 MGKARKRFIDPANSQHFYVVHRSQRDANGD------DPKASQYVLLPGRRGNAADRGEATEPSQREKDI--RWRDHINELGLPNDGYNYGRHLKTMGG-GRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAP----ARGWGHGELESMQRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLTEYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSSTLV---------------MEEDEIHEGAEEILETGADDI----------EDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAP-----KKAISNANTGSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVN----RSVFQFS 579
            MGK  K F+D   S  ++++HRSQRD   D      D  A+  VL P    N     EA   S+R+  I   WR  + + GL  +  +  R LK + G G F+  +G I  AR       L +    +D+ I             ++   ++I L+ADCMDE++ +ALFG   E+  E         ELNDDF+L A +EP      EDGE       D FD++ H+  L+AK++      P    A  WG  + +    + P       ++DDE + + +   K MG A                    S +      E+FE  L EY  +D+G  +  +EE    GG   + E + + E  L+ FL  K      +GKR+      +G     G SG S L+                E+DE      ++L    + +          E  I    Y  +R+   PWDCE++LST SNL N+P  I       G K+  K  S    L +  D         + + LS+K+GLPLGVLP         + I++ N G  R+K+E   +K+ARK A+K  R+  R +KK   + FKE       Q R+ +  V+    ++VF++S
Sbjct:    1 MGKT-KPFVDKKKSSTYHLLHRSQRDVASDILLQEGDLAAAGMVLWPSE-NNLPTTNEAVLSSERDSSIMSTWRKRLEDAGLLEE--DPERFLKPITGTGTFLNTAGRIGDARAPNDARALLK----EDDTIL-----------EVERQFNSIPLTADCMDEDIAQALFGDFDENEFE---------ELNDDFVLDAAQEP------EDGETQ-----DAFDYDEHINRLMAKAKLERRGDPTIPGAHAWGKQDNQFFSGMKP-----LHENDDEDSWD-NEFGKNMGVAPS-----------------LSPEEEKVLCEQFEATLLEYDSDDLG--DCPDEEI---GGTRPL-EGDAQFEATLEEFLTEKEDEVFMKGKREY-----LGGIKETGGSGFSALLGGRMVHAKYLNDVNPAEDDEPPTNVNQLLMEAQETLNRPLQQPPAEEILIDGKSYFSERER-NPWDCESVLSTYSNLANNPVTI-------GPKVRRKKKSNTSVLSQQED------EPVQHILLSQKTGLPLGVLPSRTVMDRFDETINSVNRGEARNKEESNEEKKARKQAIKRERQMARIQKKATAEVFKE-----EFQKRAVDYGVDDVAGKTVFRYS 534          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|224014784|ref|XP_002297054.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968434|gb|EED86782.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 130.183 bits (326), Expect = 3.410e-28
Identity = 182/674 (27.00%), Postives = 276/674 (40.95%), Query Frame = 0
Query:    1 MGKARKRFIDPANSQHFYVVHRSQRDANGDDPKA---SQYVLLPG------------RRGNAADRGEATEPSQREKDIRWRDHINELG----LPNDGYNYGRHLKTM-GGGRFIAAS---------------GEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSE-KSLGWAPARGW---GHGELESM-QRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEG-GMPKSGKHRSRFEEEFEDLLTEYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSSTLV---------MEEDEIHEG--------------------AEEILETGADDI---EDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLP------------------LAPKKAISNANTGSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVN----RSVFQFS 579
            MGK +K FID  ++  F+VV RSQRD  G +  A   S +VL+P                  +          ++  + +    ++L     L      Y ++ K + GGG FI++S                      T   + QL   +   D  +A  E +A  RE  +  ++D+I L+ DCM+E++   LF  + E+GE +        E+ DDF L A  EP+ D DEE        GG +F+FE H+  L+ K++ K  G    R       G+++ + QRV         D D     E     ++        D     E S +G   P +G+ +    ++FE+ L EY  +D+G L+   EE     G   + E + ++E  L+ FL  K      +G +     LE  +  R G SG S LV         +  D++                       A+E L     D+   E FI    Y  +R    PWDCE+ILST SNLDN+P +I   R  + +K  G   S +       +  + PE+A   + LS K+GLP+GV                            + N G  RDK E   +K+ RK A+K  R+  R +KK M +AFK        Q R     V+     +VF+FS
Sbjct:    1 MGK-KKPFIDKKSASVFHVVRRSQRDV-GVEATAETLSDFVLMPSPDNEKRAAAAASNTNATSATATTASKQHKKASVDFTALKSQLSAAGLLDQTATTYSKYTKPIQGGGTFISSSDATSSDNTYIPNNGNASYASTTTTADINQLLTDTSKNDLDVALQEAMA-VRE--VGRMLDSIALTPDCMEEDVAHMLF-DEYENGEYE--------EILDDFCLTANMEPESDDDEE--------GGGEFNFEEHIRRLMEKAKMKENGEEGGRQLEEDFFGDVKPLHQRVIEEDGEDNYDYDQYGEEEEDSLDREFNGEEDSLDREFNGEQSADGYSKPINGEQQRILCKKFEEALLEYDSDDVGDLD---EECEDIVGERPL-EGDAQLEAALNEFLTEKEDEVLIEGTK----HLESYK--RTGGSGYSALVGKTMVHASELNADDVDPSKNLLINIEESKKQMQKDLAEADEFLANPEVDLPPEEIFIDGKSYFTER-TQNPWDCESILSTYSNLDNNPVVIG--RSSRSKKKRGNKKSTM----NDEESNVIPEDAPVKIQLSNKTGLPIGVFANHNNQHQPQDDDGEYDNYYNESDTFLSVNKGEARDKTESATEKKMRKMAIKDERKICRMQKKIMKEAFK-----YEFQQRGSADVVDAVGGTTVFRFS 630          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|1072235949|gb|OEU20677.1| (hypothetical protein FRACYDRAFT_205946 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 129.028 bits (323), Expect = 5.172e-28
Identity = 167/636 (26.26%), Postives = 270/636 (42.45%), Query Frame = 0
Query:    1 MGKARKRFIDPANSQHFYVVHRSQRD-ANGDDPKASQ------YVLLPGRRGNAADRGEATEPSQREKDI---------------RWRDHINELGLPNDGYNYGRHLKTMGG-GRFIAASGEIVQARTRGGVYQL--AQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAPARGWGHGELESMQRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSR-FEEEFEDLLTEYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSSTLVMEEDEIHE------GAEEILETGADDI----------EDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLP------------LAPKKAISNANTGSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVN----RSVFQF 578
            MGK +K FID  N+  +++++RSQRD A+GD    S+       VL P    N         P   EK +               +W++ ++E GL +D ++Y  H K + G G++ A + + +   ++  V  +  A+   ++DE +           + +   +D+I L++D MDEE+ + LFG D ++GE +        ELND+F+L A KEP+   D          G   FDF AH+  LI K         A+   H E   M  ++     G  D D     +   +                +  +  G +PK  +   +   ++F + L EY  +++G  EG +++      P    E + ++E  LD++L+ +      QG R        G  G     G+  + +++  + E        +EIL    D +          E FI    Y  +R    PWDCE+ILST SNLDN+P  I+    R+ RK             +       P    +++ LS+K+GLPL VLP            L     + + N G KR K+E   +K+ RK  VK  R+  R +KK M +AF +         R  +  V+     SVF+F
Sbjct:    1 MGKTKKPFIDKKNASTYHLLYRSQRDVADGDADNGSESGNNSGVVLWPSPNNN---------PETDEKILLGKKGVRVIEDGALSQWKNQLSEAGLVDD-FDYEEHTKPITGTGQYFANNTKNMPGTSKREVNFMLDARARDVKDEIV-----------QEVDRQLDSIALTSDHMDEEIAQMLFG-DFDEGEFE--------ELNDEFVLDAAKEPEPTAD----------GDQAFDFAAHVQGLIDK---------AKMESHDE-AGMGGLSTIHEQGKMDQDFFSKAKRVGKGYDDDNDDDGDSGYFDENDTIPGIVPKLTQLEEQALCDKFNEALAEYDSDELG--EGYDDDDVIGNRP---LEGDTQVEAALDDYLQERDDDIFMQGNRHYMDGPNNGGSGFAALVGTKMVPVKDINLKEIDCTIRPMDEILGEADDTLRNPHAAPPIEEVFIDGKSYYSER-MRNPWDCESILSTYSNLDNNPMTIASSSRRRRRKPKKGKSG---LGDDDESTASAPAQQHQIIQLSEKTGLPLEVLPSGHYTDDGYCPTLDGADTMMSVNKGEKRHKNESAEEKKLRKLNVKKERQVARMQKKMMKEAFND-----EFNKRQNDLLVDDMGGTSVFRF 572          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|953500863|emb|CEG37896.1| (Uncharacterized conserved protein [Plasmopara halstedii])

HSP 1 Score: 128.257 bits (321), Expect = 7.465e-28
Identity = 170/634 (26.81%), Postives = 260/634 (41.01%), Query Frame = 0
Query:    8 FIDPAN-SQHFYVVHRS--QRDANGDDPKASQYVLLPG------RRGNAADRGEATEPSQRE--------------------------KDIRW-----RDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEI---VQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSEKSLGWAP-ARGWGHGELESMQRVTPSRHLGFRDSDDEKTLELSRRSKKMGAAAKPHDATRMKESSGEGGMPKSGKHRSRFEEEFEDLLT-EYGEEDIGGLEGTEEEASARGGPGAVKEEEDRIEDILDNFLRAKIACTARQGKRDGHSELEVGRKGRPGSSGSST-LVMEEDEIHEGAEEI------------------LETGADDIEDFIAKHDYLGDRDGLVPWDCETILSTCSNLDNHPSLISEQRGRQGRKMHGKHCSELPRLPEGRDVGLCPENAAEMVALSKKSGLPLGVLPLAPK-KAISNANT---GSKRDKDEKVLDKRARKAAVKLARREGRARKKEMTQAFKEVEKVAGLQSRSGETAVNR 573
             + PA   QH   V     QRD+  +DP+AS+YVLL        R  +  +  E    S  E                          + +R+      D ++E GLP DGY+Y +H+K MG G+F +A+       +AR       L +            + +    ++RL   +DAITL+ D MD++L  AL   +               EL+D+F+ +A         +E+ E++G+ G   FD++AH+A L+   E + G  P  RG           +T S      D+D+++                  D  +      E  M +    R+  +E FE  L  EY +E  G LE  E++   RG      E    +  I+D+++        +Q   D       GR G P  +G++   V+EE E    A E                    E    ++++   ++ YL  R+    WDCETI+ST S  DNHP+L+ E    + +    K    L    EG D         + V LS+KSG+PLGV  +A   K+  N  +    S+R K E   +KRARK  VK+A+   RA KK     FKE E     Q+  G  +V +
Sbjct:    1 MVSPARYCQHVLQVFDDAVQRDSKANDPEASKYVLLSSSQPVELRSDSELEDDEINSDSDEEMPDLIVAPVKAVQTFNAKPSKSTFPVRKVRFGGIVAEDLVDENGLPRDGYDYSQHMKEMGEGKFYSATSRFDAGEEARVLSRKVDLPK------------DALPSTEQDRL---LDAITLTTDVMDDDLREALVNDE------------AFEELDDNFVAEAA--------QENAELEGDDG---FDYDAHIAKLM---EAASGLVPLCRG----------NITDSEDEDLSDNDNDR--------------KNSEDYYK----DDEAVMDRDEAQRA-LDELFEKTLAEEYDDEQFGELE--EDDPKTRGKETLQGE---LLTTIVDDYV------IVQQELADSE-----GRLGNPLRTGNNLKQVLEECETQRHAYEFDENAETEDEEEPEDILARTEREEKELQELFKQNQYLQ-REEHEKWDCETIVSTYSTQDNHPTLLRESTPTRRK---NKKQPLLAFTAEGND--------KQKVTLSRKSGMPLGVFEVASSVKSQFNKQSQSENSRRQKGETKEEKRARKTTVKMAKIARRAEKKGTKLLFKEEEARQLTQTVPGCVSVYK 536          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|669172183|ref|XP_008621440.1| (hypothetical protein SDRG_16985 [Saprolegnia diclina VS20] >gi|530726887|gb|EQC25129.1| hypothetical protein SDRG_16985 [Saprolegnia diclina VS20])

HSP 1 Score: 127.487 bits (319), Expect = 7.949e-28
Identity = 87/246 (35.37%), Postives = 130/246 (52.85%), Query Frame = 0
Query:    1 MGKARKRFIDPANSQHFYVVHRSQRDANGDDPKASQYVLLPGRRGNAADRGE------------------ATEPSQREK--DIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSE 226
            MGK +K FI+   +QHF+VVHRSQRD   +DP AS++VLL   +    D  +                  A+ P+++ +  ++  +D +NELG+ NDGY+Y +H+K +G G+F +A          GG Y   +G+GL  +R+   + V        + +++AITL+ D MDE+L  AL   D               ELNDDF+LQA     ED  E+DG  DG      FD+EAH+A L+A ++
Sbjct:    1 MGK-KKAFINKKEAQHFHVVHRSQRDPLINDPTASKFVLLSATQAQEYDGSQAPYDSDDDDDDDDMPDLVASAPAKQVRFGNVVAQDLVNELGMVNDGYDYKKHMKEIGHGQFYSA----------GGTYD--EGAGLLSKRVVLPDDVLASNTVESERMLEAITLTEDVMDEDLREALTNED------------AFEELNDDFMLQAA----EDNGEDDGAADG------FDYEAHIAKLMAAAD 211          
BLAST of EWM26617.1 vs. NCBI_GenBank
Match: gi|813185709|ref|XP_012207026.1| (hypothetical protein SPRG_12132 [Saprolegnia parasitica CBS 223.65] >gi|641528040|gb|KDO22292.1| hypothetical protein SPRG_12132 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 127.487 bits (319), Expect = 8.653e-28
Identity = 86/245 (35.10%), Postives = 130/245 (53.06%), Query Frame = 0
Query:    1 MGKARKRFIDPANSQHFYVVHRSQRDANGDDPKASQYVLLPGRRGNAADRGE-----------------ATEPSQREK--DIRWRDHINELGLPNDGYNYGRHLKTMGGGRFIAASGEIVQARTRGGVYQLAQGSGLQDERIAGDEGVAPCREERLKPVVDAITLSADCMDEELERALFGSDTEDGEEKVEGVRGCGELNDDFILQAGKEPKEDLDEEDGEVDGNGGGDKFDFEAHMAMLIAKSE 226
            MGK +K FI+   +QHF+VVHRSQRD   +DP AS++VLL   +    D  +                 A+ P+++ +  ++  +D +NELG+ NDGY+Y +H++ +G G+F +A          GG Y   +G+GL  +R+   + V        + +++AITL+ D MDE+L  AL   D               ELNDDF+LQA     ED  E+DG  DG      FD+EAH+A L+A ++
Sbjct:    1 MGK-KKAFINKKEAQHFHVVHRSQRDPLINDPTASKFVLLSATQAQEFDGSQAPYDSGDDDDDDMPDLVASAPTKQVRFGNVVAQDLVNELGMVNDGYDYTKHMREIGHGQFYSA----------GGTYD--EGAGLLSKRVVLPDDVLASNTVESERMLEAITLTEDVMDEDLREALTNED------------AFEELNDDFMLQAA----EDNGEDDGAADG------FDYEAHIAKLMAAAD 210          
The following BLAST results are available for this feature:
BLAST of EWM26617.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108705|gb|EWM26617.1|0.000e+0100.00Low temperature viability protein [Nannochloropsis... [more]
gi|673050767|ref|XP_008879344.1|1.060e-3928.15hypothetical protein H310_13572 [Aphanomyces invad... [more]
gi|1173960527|gb|OQS06644.1|2.156e-3828.03hypothetical protein THRCLA_01317 [Thraustotheca c... [more]
gi|1210521196|dbj|GAX19944.1|1.308e-3729.28protein LTV1 [Fistulifera solaris][more]
gi|1210512355|dbj|GAX28624.1|3.549e-3728.91protein LTV1 [Fistulifera solaris][more]
gi|224014784|ref|XP_002297054.1|3.410e-2827.00predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1072235949|gb|OEU20677.1|5.172e-2826.26hypothetical protein FRACYDRAFT_205946 [Fragilario... [more]
gi|953500863|emb|CEG37896.1|7.465e-2826.81Uncharacterized conserved protein [Plasmopara hals... [more]
gi|669172183|ref|XP_008621440.1|7.949e-2835.37hypothetical protein SDRG_16985 [Saprolegnia dicli... [more]
gi|813185709|ref|XP_012207026.1|8.653e-2835.10hypothetical protein SPRG_12132 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3960rna3960Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications